RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 F8WEM9 126 aa7.77□□□□□ -1.17
RPS28-201ENST00000417088 LINC00575Q6W349 94 aa7.75□□□□□ -1.17
RPS28-201ENST00000417088 VAMP3Q15836 100 aa7.74□□□□□ -1.17
RPS28-201ENST00000417088 TRBV7-7A0A0K0K1E9 115 aa7.73□□□□□ -1.17
RPS28-201ENST00000417088 Q6JHZ5 121 aa7.73□□□□□ -1.17
RPS28-201ENST00000417088 IGFL1Q6UW32 110 aa7.73□□□□□ -1.17
RPS28-201ENST00000417088 Q6ZQY7 126 aa7.73□□□□□ -1.17
RPS28-201ENST00000417088 hADV29S1A0JD25 119 aa7.72□□□□□ -1.17
RPS28-201ENST00000417088 CLEC2BQ92478 149 aa7.72□□□□□ -1.17
RPS28-201ENST00000417088 OCIAD2Q56VL3 154 aa7.71□□□□□ -1.18
RPS28-201ENST00000417088 OBSCN-AS1Q96MR7 158 aa7.71□□□□□ -1.18
RPS28-201ENST00000417088 ATP11AUNQ6ZP68 121 aa7.7□□□□□ -1.18
RPS28-201ENST00000417088 Q75L30 129 aa7.7□□□□□ -1.18
RPS28-201ENST00000417088 SNRPEP62304 92 aaKnown RBP7.69□□□□□ -1.18
RPS28-201ENST00000417088 Q6Q795 121 aa7.69□□□□□ -1.18
RPS28-201ENST00000417088 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.66□□□□□ -1.18
RPS28-201ENST00000417088 LST1O00453 97 aa7.63□□□□□ -1.19
RPS28-201ENST00000417088 PPDPFLQ8WWR9 84 aa7.63□□□□□ -1.19
RPS28-201ENST00000417088 Q96NJ1 140 aa7.63□□□□□ -1.19
RPS28-201ENST00000417088 SNHG12Q9BXW3 62 aa7.63□□□□□ -1.19
RPS28-201ENST00000417088 H3BUT2 72 aa7.62□□□□□ -1.19
RPS28-201ENST00000417088 S100A1P23297 94 aa7.61□□□□□ -1.19
RPS28-201ENST00000417088 BVES-AS1Q5T3Y7 98 aa7.6□□□□□ -1.19
RPS28-201ENST00000417088 C12orf57Q99622 126 aa7.6□□□□□ -1.19
RPS28-201ENST00000417088 SSPOA2VEC9 5147 aa7.59□□□□□ -1.19
RPS28-201ENST00000417088 HSBP1L1C9JCN9 74 aa7.59□□□□□ -1.19
RPS28-201ENST00000417088 SCGB1D1O95968 90 aa7.59□□□□□ -1.19
RPS28-201ENST00000417088 C20orf166-AS1Q96NR2 134 aa7.59□□□□□ -1.19
RPS28-201ENST00000417088 KRTAP9-8Q9BYQ0 159 aa7.59□□□□□ -1.19
RPS28-201ENST00000417088 USH2AO75445 5202 aa7.59□□□□□ -1.19
RPS28-201ENST00000417088 HIST3H2BBQ8N257 126 aa7.58□□□□□ -1.2
RPS28-201ENST00000417088 HIST1H2BLQ99880 126 aa7.58□□□□□ -1.2
RPS28-201ENST00000417088 A8MUU9 505 aa7.57□□□□□ -1.2
RPS28-201ENST00000417088 CFC1P0CG37 223 aa7.56□□□□□ -1.2
RPS28-201ENST00000417088 SS18L2Q9UHA2 77 aa7.56□□□□□ -1.2
RPS28-201ENST00000417088 HIST1H4GQ99525 98 aa7.55□□□□□ -1.2
RPS28-201ENST00000417088 S100A2P29034 98 aa7.54□□□□□ -1.2
RPS28-201ENST00000417088 TEN1Q86WV5 123 aa7.53□□□□□ -1.2
RPS28-201ENST00000417088 TRBV20-1A0A075B6N2 111 aa7.52□□□□□ -1.21
RPS28-201ENST00000417088 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.52□□□□□ -1.21
RPS28-201ENST00000417088 A0A087WSZ3 146 aa7.51□□□□□ -1.21
RPS28-201ENST00000417088 NDUFV3P56181 108 aaKnown RBP7.51□□□□□ -1.21
RPS28-201ENST00000417088 KRTAP9-7A8MTY7 169 aa7.5□□□□□ -1.21
RPS28-201ENST00000417088 FAM218AQ96MZ4 157 aa7.5□□□□□ -1.21
RPS28-201ENST00000417088 H0YGX0 51 aa7.49□□□□□ -1.21
RPS28-201ENST00000417088 COX8AP10176 69 aa7.49□□□□□ -1.21
RPS28-201ENST00000417088 DSCR10P59022 87 aa7.49□□□□□ -1.21
RPS28-201ENST00000417088 SNCGO76070 127 aa7.48□□□□□ -1.21
RPS28-201ENST00000417088 KRTAP16-1A8MUX0 517 aa7.46□□□□□ -1.22
RPS28-201ENST00000417088 H3BMG7 143 aa7.46□□□□□ -1.22
RPS28-201ENST00000417088 DLEU1O43261 78 aa7.46□□□□□ -1.22
RPS28-201ENST00000417088 RAB37Q96AX2 223 aa7.46□□□□□ -1.22
RPS28-201ENST00000417088 MT2AP02795 61 aa7.45□□□□□ -1.22
RPS28-201ENST00000417088 A0A0B4J2C4 111 aa7.44□□□□□ -1.22
RPS28-201ENST00000417088 FCGBPQ9Y6R7 5405 aaPredicted RBP7.44□□□□□ -1.22
RPS28-201ENST00000417088 A0A1W2PNM2 257 aa7.43□□□□□ -1.22
RPS28-201ENST00000417088 S100A6P06703 90 aa7.43□□□□□ -1.22
RPS28-201ENST00000417088 FABP2P12104 132 aa7.43□□□□□ -1.22
RPS28-201ENST00000417088 SIGMAR1Q99720 223 aa7.43□□□□□ -1.22
RPS28-201ENST00000417088 LINC00313P59037 77 aa7.42□□□□□ -1.22
RPS28-201ENST00000417088 A0A1B0GX51 115 aa7.41□□□□□ -1.22
RPS28-201ENST00000417088 C14orf144Q96I85 54 aa7.41□□□□□ -1.22
RPS28-201ENST00000417088 FAM236DA0A1B0GTK5 79 aa7.4□□□□□ -1.22
RPS28-201ENST00000417088 GHRHP01286 108 aa7.4□□□□□ -1.22
RPS28-201ENST00000417088 FAM236CP0DP71 79 aa7.4□□□□□ -1.22
RPS28-201ENST00000417088 MPLKIPQ8TAP9 179 aa7.4□□□□□ -1.22
RPS28-201ENST00000417088 HIGD1BQ9P298 99 aa7.4□□□□□ -1.22
RPS28-201ENST00000417088 MT1FP04733 61 aa7.39□□□□□ -1.23
RPS28-201ENST00000417088 IGKV4-1P06312 121 aa7.39□□□□□ -1.23
RPS28-201ENST00000417088 LCE2BO14633 110 aa7.38□□□□□ -1.23
RPS28-201ENST00000417088 HRES1P13985 223 aa7.38□□□□□ -1.23
RPS28-201ENST00000417088 C2orf91Q6ZV80 131 aa7.38□□□□□ -1.23
RPS28-201ENST00000417088 NOTCH2NLQ7Z3S9 236 aa7.38□□□□□ -1.23
RPS28-201ENST00000417088 PRO1854Q9UHT4 67 aa7.37□□□□□ -1.23
RPS28-201ENST00000417088 TRBV7-4A0A0J9YYF1 115 aa7.36□□□□□ -1.23
RPS28-201ENST00000417088 RBM12B-AS1Q9P1G2 102 aa7.36□□□□□ -1.23
RPS28-201ENST00000417088 CEND1Q8N111 149 aa7.35□□□□□ -1.23
RPS28-201ENST00000417088 ANKRD29Q8N6D5 301 aa7.35□□□□□ -1.23
RPS28-201ENST00000417088 KRTAP9-3Q9BYQ3 159 aa7.35□□□□□ -1.23
RPS28-201ENST00000417088 PAM16Q9Y3D7 125 aa7.35□□□□□ -1.23
RPS28-201ENST00000417088 TRIAP1O43715 76 aa7.34□□□□□ -1.23
RPS28-201ENST00000417088 DEFB116Q30KQ4 102 aa7.34□□□□□ -1.23
RPS28-201ENST00000417088 SPATA45Q537H7 98 aa7.34□□□□□ -1.23
RPS28-201ENST00000417088 KRTAP19-1Q8IUB9 90 aa7.34□□□□□ -1.23
RPS28-201ENST00000417088 A0A1B0GV72 72 aa7.33□□□□□ -1.24
RPS28-201ENST00000417088 KRTAP10-10P60014 251 aa7.33□□□□□ -1.24
RPS28-201ENST00000417088 LINC00472Q9H8W2 130 aa7.33□□□□□ -1.24
RPS28-201ENST00000417088 MACF1Q9UPN3 7388 aaKnown RBP7.32□□□□□ -1.24
RPS28-201ENST00000417088 TMEM238LA0A1B0GVL6 79 aa7.31□□□□□ -1.24
RPS28-201ENST00000417088 A6NJY4 79 aa7.31□□□□□ -1.24
RPS28-201ENST00000417088 FXYD2P54710 66 aa7.31□□□□□ -1.24
RPS28-201ENST00000417088 SYNE2Q8WXH0 6885 aaKnown RBP7.31□□□□□ -1.24
RPS28-201ENST00000417088 IGHV6-1A0A0B4J1U7 121 aa7.3□□□□□ -1.24
RPS28-201ENST00000417088 ORMDL1Q9P0S3 153 aa7.3□□□□□ -1.24
RPS28-201ENST00000417088 DNAL4O96015 105 aa7.29□□□□□ -1.24
RPS28-201ENST00000417088 VAMP8Q9BV40 100 aa7.29□□□□□ -1.24
RPS28-201ENST00000417088 H3BQ85 93 aa7.28□□□□□ -1.24
RPS28-201ENST00000417088 CCKP06307 115 aa7.28□□□□□ -1.24
RPS28-201ENST00000417088 TRACP01848 142 aa7.27□□□□□ -1.25
RPS28-201ENST00000417088 TMEM256-PLSCR3K7ERE1 68 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms