RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 H0YGX0 51 aa10.23□□□□□ -0.77
SEMA3B-201ENST00000416295 LPAP08519 4548 aa10.23□□□□□ -0.77
SEMA3B-201ENST00000416295 TPRXLQ17RH7 258 aa10.22□□□□□ -0.77
SEMA3B-201ENST00000416295 F8WEM9 126 aa10.21□□□□□ -0.77
SEMA3B-201ENST00000416295 CD164Q04900 197 aa10.21□□□□□ -0.77
SEMA3B-201ENST00000416295 PPDPFLQ8WWR9 84 aa10.2□□□□□ -0.78
SEMA3B-201ENST00000416295 LIMD2Q9BT23 127 aa10.2□□□□□ -0.78
SEMA3B-201ENST00000416295 SMIM6P0DI80 62 aa10.19□□□□□ -0.78
SEMA3B-201ENST00000416295 HRCT1Q6UXD1 115 aa10.18□□□□□ -0.78
SEMA3B-201ENST00000416295 OCIAD2Q56VL3 154 aa10.16□□□□□ -0.78
SEMA3B-201ENST00000416295 A0A1B0GX51 115 aa10.15□□□□□ -0.78
SEMA3B-201ENST00000416295 K7ERJ3 54 aa10.15□□□□□ -0.78
SEMA3B-201ENST00000416295 TRIAP1O43715 76 aa10.15□□□□□ -0.78
SEMA3B-201ENST00000416295 FAM218AQ96MZ4 157 aa10.15□□□□□ -0.78
SEMA3B-201ENST00000416295 CDIP1Q9H305 208 aa10.15□□□□□ -0.78
SEMA3B-201ENST00000416295 SNHG12Q9BXW3 62 aa10.14□□□□□ -0.79
SEMA3B-201ENST00000416295 Q6JHZ5 121 aa10.13□□□□□ -0.79
SEMA3B-201ENST00000416295 IGLV8-61A0A075B6I0 122 aa10.12□□□□□ -0.79
SEMA3B-201ENST00000416295 PSMB2P49721 201 aa10.12□□□□□ -0.79
SEMA3B-201ENST00000416295 GHRHP01286 108 aa10.11□□□□□ -0.79
SEMA3B-201ENST00000416295 COX6CP09669 75 aa10.11□□□□□ -0.79
SEMA3B-201ENST00000416295 A0A0G2JQZ4 141 aa10.1□□□□□ -0.79
SEMA3B-201ENST00000416295 Q5XG85 94 aa10.1□□□□□ -0.79
SEMA3B-201ENST00000416295 KRTAP13-3Q3SY46 172 aa10.09□□□□□ -0.79
SEMA3B-201ENST00000416295 CLEC2BQ92478 149 aa10.09□□□□□ -0.79
SEMA3B-201ENST00000416295 A0A0U1RQV1 116 aa10.06□□□□□ -0.8
SEMA3B-201ENST00000416295 M0R143 59 aa10.06□□□□□ -0.8
SEMA3B-201ENST00000416295 IGFL1Q6UW32 110 aa10.06□□□□□ -0.8
SEMA3B-201ENST00000416295 DNAL4O96015 105 aa10.05□□□□□ -0.8
SEMA3B-201ENST00000416295 LOC105371267A0A1B0GV96 52 aa10.04□□□□□ -0.8
SEMA3B-201ENST00000416295 TSTD3H0UI37 97 aa10.04□□□□□ -0.8
SEMA3B-201ENST00000416295 TCL1BO95988 128 aa10.04□□□□□ -0.8
SEMA3B-201ENST00000416295 NDUFV3P56181 108 aaKnown RBP10.04□□□□□ -0.8
SEMA3B-201ENST00000416295 H3BQ85 93 aa10.02□□□□□ -0.81
SEMA3B-201ENST00000416295 H3BUT2 72 aa10.02□□□□□ -0.81
SEMA3B-201ENST00000416295 FABP2P12104 132 aa10.02□□□□□ -0.81
SEMA3B-201ENST00000416295 ORMDL1Q9P0S3 153 aa10.01□□□□□ -0.81
SEMA3B-201ENST00000416295 TRBV7-7A0A0K0K1E9 115 aa10□□□□□ -0.81
SEMA3B-201ENST00000416295 MUC2Q02817 5179 aa10□□□□□ -0.81
SEMA3B-201ENST00000416295 SCGB1C2P0DMR2 95 aa9.99□□□□□ -0.81
SEMA3B-201ENST00000416295 C1orf195Q5TG92 126 aa9.99□□□□□ -0.81
SEMA3B-201ENST00000416295 H3BMG7 143 aa9.97□□□□□ -0.81
SEMA3B-201ENST00000416295 TRACP01848 142 aa9.97□□□□□ -0.81
SEMA3B-201ENST00000416295 ASB16-AS1Q495Z4 193 aa9.96□□□□□ -0.82
SEMA3B-201ENST00000416295 TMEM256-PLSCR3K7ERE1 68 aa9.95□□□□□ -0.82
SEMA3B-201ENST00000416295 LST1O00453 97 aa9.95□□□□□ -0.82
SEMA3B-201ENST00000416295 Q6Q795 121 aa9.94□□□□□ -0.82
SEMA3B-201ENST00000416295 TEN1Q86WV5 123 aa9.93□□□□□ -0.82
SEMA3B-201ENST00000416295 XP32Q5T750 250 aa9.91□□□□□ -0.82
SEMA3B-201ENST00000416295 SS18L2Q9UHA2 77 aa9.91□□□□□ -0.82
SEMA3B-201ENST00000416295 C9orf92A6NGG3 77 aa9.89□□□□□ -0.83
SEMA3B-201ENST00000416295 SEC61BP60468 96 aaKnown RBP9.89□□□□□ -0.83
SEMA3B-201ENST00000416295 UBE2V1Q13404 147 aa9.89□□□□□ -0.83
SEMA3B-201ENST00000416295 BATFQ16520 125 aa9.87□□□□□ -0.83
SEMA3B-201ENST00000416295 ANKRD29Q8N6D5 301 aa9.87□□□□□ -0.83
SEMA3B-201ENST00000416295 ATXN8Q156A1 80 aa9.86□□□□□ -0.83
SEMA3B-201ENST00000416295 LYRM7Q5U5X0 104 aa9.86□□□□□ -0.83
SEMA3B-201ENST00000416295 NAA38Q9BRA0 125 aaKnown RBP9.86□□□□□ -0.83
SEMA3B-201ENST00000416295 A0A1B0GV72 72 aa9.85□□□□□ -0.83
SEMA3B-201ENST00000416295 A0A087WSZ3 146 aa9.84□□□□□ -0.83
SEMA3B-201ENST00000416295 A0A1W2PNM2 257 aa9.83□□□□□ -0.84
SEMA3B-201ENST00000416295 BAALC-AS2P0C853 105 aa9.82□□□□□ -0.84
SEMA3B-201ENST00000416295 TRBV7-4A0A0J9YYF1 115 aa9.81□□□□□ -0.84
SEMA3B-201ENST00000416295 RBM3P98179 157 aaKnown RBP9.79□□□□□ -0.84
SEMA3B-201ENST00000416295 MUC17Q685J3 4493 aa9.78□□□□□ -0.84
SEMA3B-201ENST00000416295 TRBV20-1A0A075B6N2 111 aa9.78□□□□□ -0.84
SEMA3B-201ENST00000416295 CCKP06307 115 aa9.78□□□□□ -0.84
SEMA3B-201ENST00000416295 DSCR8Q96T75 97 aa9.78□□□□□ -0.84
SEMA3B-201ENST00000416295 C9orf118A6NHY6 69 aa9.75□□□□□ -0.85
SEMA3B-201ENST00000416295 LCE2AQ5TA79 106 aaPredicted RBP9.75□□□□□ -0.85
SEMA3B-201ENST00000416295 FAT4Q6V0I7 4981 aa9.75□□□□□ -0.85
SEMA3B-201ENST00000416295 Q96NJ1 140 aa9.73□□□□□ -0.85
SEMA3B-201ENST00000416295 JMJD7-PLA2G4BH0Y9G9 81 aa9.72□□□□□ -0.85
SEMA3B-201ENST00000416295 TAX1BP3O14907 124 aa9.72□□□□□ -0.85
SEMA3B-201ENST00000416295 C9JAW5 83 aa9.71□□□□□ -0.86
SEMA3B-201ENST00000416295 RPL37P61927 97 aaKnown RBP9.71□□□□□ -0.86
SEMA3B-201ENST00000416295 PCOTHQ58A44 107 aa9.71□□□□□ -0.86
SEMA3B-201ENST00000416295 VPS25Q9BRG1 176 aa9.71□□□□□ -0.86
SEMA3B-201ENST00000416295 OBSCN-AS1Q96MR7 158 aa9.7□□□□□ -0.86
SEMA3B-201ENST00000416295 A0A1W2PPM0 123 aa9.69□□□□□ -0.86
SEMA3B-201ENST00000416295 C21orf62-AS1Q17RA5 79 aa9.69□□□□□ -0.86
SEMA3B-201ENST00000416295 SIGMAR1Q99720 223 aa9.69□□□□□ -0.86
SEMA3B-201ENST00000416295 KRTAP4-1Q9BYQ7 146 aa9.68□□□□□ -0.86
SEMA3B-201ENST00000416295 IGKV4-1P06312 121 aa9.65□□□□□ -0.86
SEMA3B-201ENST00000416295 PDE6GP18545 87 aa9.65□□□□□ -0.86
SEMA3B-201ENST00000416295 LOC110117498A0A087WWA1 95 aa9.64□□□□□ -0.87
SEMA3B-201ENST00000416295 LINC00472Q9H8W2 130 aa9.64□□□□□ -0.87
SEMA3B-201ENST00000416295 Q6ZQT0 140 aa9.63□□□□□ -0.87
SEMA3B-201ENST00000416295 Q75L30 129 aa9.63□□□□□ -0.87
SEMA3B-201ENST00000416295 KRTAP9-2Q9BYQ4 174 aa9.63□□□□□ -0.87
SEMA3B-201ENST00000416295 H3BT86 120 aa9.62□□□□□ -0.87
SEMA3B-201ENST00000416295 COL5A1-AS1Q5SY13 56 aa9.62□□□□□ -0.87
SEMA3B-201ENST00000416295 A0A1B0GW54 56 aa9.61□□□□□ -0.87
SEMA3B-201ENST00000416295 C14orf132Q9NPU4 83 aa9.6□□□□□ -0.87
SEMA3B-201ENST00000416295 DEFB116Q30KQ4 102 aa9.59□□□□□ -0.87
SEMA3B-201ENST00000416295 SPCS1Q9Y6A9 102 aa9.58□□□□□ -0.88
SEMA3B-201ENST00000416295 DSCR10P59022 87 aa9.57□□□□□ -0.88
SEMA3B-201ENST00000416295 ATP11AUNQ6ZP68 121 aa9.57□□□□□ -0.88
SEMA3B-201ENST00000416295 C20orf166-AS1Q96NR2 134 aa9.57□□□□□ -0.88
SEMA3B-201ENST00000416295 LINC00313P59037 77 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 648 ms