RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 ABCA12Q86UK0 2595 aa3.21□□□□□ -1.89
R3HDM1-204ENST00000410054 TRRAPQ9Y4A5 3859 aa3.21□□□□□ -1.9
R3HDM1-204ENST00000410054 ADAMTS9Q9P2N4 1935 aa3.21□□□□□ -1.9
R3HDM1-204ENST00000410054 DNAH3Q8TD57 4116 aa3.21□□□□□ -1.9
R3HDM1-204ENST00000410054 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.2□□□□□ -1.9
R3HDM1-204ENST00000410054 KRTAP4-16G5E9R7 235 aaPredicted RBP3.2□□□□□ -1.9
R3HDM1-204ENST00000410054 DCHS2Q6V1P9 2916 aa3.2□□□□□ -1.9
R3HDM1-204ENST00000410054 WWC2-AS2Q96NR7 200 aa3.19□□□□□ -1.9
R3HDM1-204ENST00000410054 LYSTQ99698 3801 aa3.19□□□□□ -1.9
R3HDM1-204ENST00000410054 A0A1B0GUV1 79 aa3.18□□□□□ -1.9
R3HDM1-204ENST00000410054 LYNX1G3V0Z9 82 aa3.18□□□□□ -1.9
R3HDM1-204ENST00000410054 LYNX1P0DP58 116 aa3.18□□□□□ -1.9
R3HDM1-204ENST00000410054 ANKRD17O75179 2603 aaKnown RBP3.18□□□□□ -1.9
R3HDM1-204ENST00000410054 CELSR1Q9NYQ6 3014 aa3.18□□□□□ -1.9
R3HDM1-204ENST00000410054 FN1P02751 2386 aaKnown RBP3.17□□□□□ -1.9
R3HDM1-204ENST00000410054 IGFL1Q6UW32 110 aa3.17□□□□□ -1.9
R3HDM1-204ENST00000410054 PANO1I0J062 215 aa3.17□□□□□ -1.9
R3HDM1-204ENST00000410054 ZNF575Q86XF7 245 aa3.17□□□□□ -1.9
R3HDM1-204ENST00000410054 LCE6AA0A183 80 aa3.17□□□□□ -1.9
R3HDM1-204ENST00000410054 ASH1LQ9NR48 2969 aaKnown RBP3.16□□□□□ -1.9
R3HDM1-204ENST00000410054 PRR34Q9NV39 138 aa3.16□□□□□ -1.9
R3HDM1-204ENST00000410054 COL12A1Q99715 3063 aa3.16□□□□□ -1.9
R3HDM1-204ENST00000410054 H1FX-AS1Q4G0G2 97 aa3.16□□□□□ -1.9
R3HDM1-204ENST00000410054 LELP1Q5T871 98 aa3.16□□□□□ -1.9
R3HDM1-204ENST00000410054 Q8N1X5 172 aa3.16□□□□□ -1.9
R3HDM1-204ENST00000410054 ADGRG4Q8IZF6 3080 aa3.15□□□□□ -1.91
R3HDM1-204ENST00000410054 JMJD1CQ15652 2540 aa3.15□□□□□ -1.91
R3HDM1-204ENST00000410054 RIF1Q5UIP0 2472 aaKnown RBP3.15□□□□□ -1.91
R3HDM1-204ENST00000410054 ZFHX2Q9C0A1 2572 aaPredicted RBP3.15□□□□□ -1.91
R3HDM1-204ENST00000410054 COX6B2Q6YFQ2 88 aa3.14□□□□□ -1.91
R3HDM1-204ENST00000410054 HIVEP2P31629 2446 aa3.14□□□□□ -1.91
R3HDM1-204ENST00000410054 CELSR2Q9HCU4 2923 aa3.14□□□□□ -1.91
R3HDM1-204ENST00000410054 C10orf99Q6UWK7 81 aa3.13□□□□□ -1.91
R3HDM1-204ENST00000410054 LINC00612Q8N6U2 182 aa3.13□□□□□ -1.91
R3HDM1-204ENST00000410054 NCOR2Q9Y618 2525 aa3.13□□□□□ -1.91
R3HDM1-204ENST00000410054 P0C880 135 aa3.13□□□□□ -1.91
R3HDM1-204ENST00000410054 ITPR1Q14643 2758 aa3.13□□□□□ -1.91
R3HDM1-204ENST00000410054 DMBT1Q9UGM3 2413 aaPredicted RBP3.12□□□□□ -1.91
R3HDM1-204ENST00000410054 KLK9Q2XQG4 91 aa3.12□□□□□ -1.91
R3HDM1-204ENST00000410054 U3KQA8 63 aa3.12□□□□□ -1.91
R3HDM1-204ENST00000410054 KRTAP26-1Q6PEX3 210 aa3.11□□□□□ -1.91
R3HDM1-204ENST00000410054 COL27A1Q8IZC6 1860 aaPredicted RBP3.11□□□□□ -1.91
R3HDM1-204ENST00000410054 GVQW2A0A096LPI5 108 aaPredicted RBP3.11□□□□□ -1.91
R3HDM1-204ENST00000410054 A0A1W2PPR1 153 aa3.11□□□□□ -1.91
R3HDM1-204ENST00000410054 A0A087WTM6 91 aa3.1□□□□□ -1.91
R3HDM1-204ENST00000410054 PRO2289Q9P1D8 64 aa3.1□□□□□ -1.91
R3HDM1-204ENST00000410054 MMP24-AS1A0A0U1RRL7 71 aa3.09□□□□□ -1.91
R3HDM1-204ENST00000410054 A0A096LNT2 108 aa3.09□□□□□ -1.91
R3HDM1-204ENST00000410054 LINC00472Q9H8W2 130 aa3.08□□□□□ -1.92
R3HDM1-204ENST00000410054 LRRK2Q5S007 2527 aa3.08□□□□□ -1.92
R3HDM1-204ENST00000410054 POLQO75417 2590 aa3.08□□□□□ -1.92
R3HDM1-204ENST00000410054 DSPP15924 2871 aaKnown RBP3.07□□□□□ -1.92
R3HDM1-204ENST00000410054 NAV2Q8IVL1 2488 aa3.06□□□□□ -1.92
R3HDM1-204ENST00000410054 CCDC168Q8NDH2 2452 aa3.06□□□□□ -1.92
R3HDM1-204ENST00000410054 MYO9AB2RTY4 2548 aa3.06□□□□□ -1.92
R3HDM1-204ENST00000410054 PLAC8Q9NZF1 115 aa3.05□□□□□ -1.92
R3HDM1-204ENST00000410054 DEFB135Q30KP9 77 aa3.05□□□□□ -1.92
R3HDM1-204ENST00000410054 DEFB4AO15263 64 aa3.04□□□□□ -1.92
R3HDM1-204ENST00000410054 KRTAP24-1Q3LI83 254 aa3.04□□□□□ -1.92
R3HDM1-204ENST00000410054 ACANP16112 2415 aa3.04□□□□□ -1.92
R3HDM1-204ENST00000410054 C10orf95Q9H7T3 257 aa3.03□□□□□ -1.92
R3HDM1-204ENST00000410054 KRTAP29-1A8MX34 341 aaPredicted RBP3.03□□□□□ -1.92
R3HDM1-204ENST00000410054 INE1O15225 51 aa3.03□□□□□ -1.93
R3HDM1-204ENST00000410054 GIG44P09565 113 aaPredicted RBP3.03□□□□□ -1.93
R3HDM1-204ENST00000410054 DNAH7Q8WXX0 4024 aa3.02□□□□□ -1.93
R3HDM1-204ENST00000410054 DOPEY1Q5JWR5 2465 aa3.02□□□□□ -1.93
R3HDM1-204ENST00000410054 SPACA4Q8TDM5 124 aa3.02□□□□□ -1.93
R3HDM1-204ENST00000410054 ANAPC11Q9NYG5 84 aa3.02□□□□□ -1.93
R3HDM1-204ENST00000410054 LINC01556Q5JQF7 62 aa3.01□□□□□ -1.93
R3HDM1-204ENST00000410054 FRAS1Q86XX4 4008 aa3□□□□□ -1.93
R3HDM1-204ENST00000410054 ANKHD1Q8IWZ3 2542 aaKnown RBP3□□□□□ -1.93
R3HDM1-204ENST00000410054 ZFYVE26Q68DK2 2539 aa2.98□□□□□ -1.93
R3HDM1-204ENST00000410054 PTPN13Q12923 2485 aa2.97□□□□□ -1.93
R3HDM1-204ENST00000410054 KMT2BQ9UMN6 2715 aaPredicted RBP2.97□□□□□ -1.93
R3HDM1-204ENST00000410054 PRKDCP78527 4128 aaKnown RBP2.97□□□□□ -1.93
R3HDM1-204ENST00000410054 TENM4Q6N022 2769 aa2.97□□□□□ -1.93
R3HDM1-204ENST00000410054 DNHD1Q96M86 4753 aa2.96□□□□□ -1.94
R3HDM1-204ENST00000410054 TLN2Q9Y4G6 2542 aa2.96□□□□□ -1.94
R3HDM1-204ENST00000410054 DEFB124Q8NES8 71 aa2.96□□□□□ -1.94
R3HDM1-204ENST00000410054 HECTD1Q9ULT8 2610 aa2.95□□□□□ -1.94
R3HDM1-204ENST00000410054 CHD8Q9HCK8 2581 aa2.95□□□□□ -1.94
R3HDM1-204ENST00000410054 KRTAP15-1Q3LI76 137 aa2.94□□□□□ -1.94
R3HDM1-204ENST00000410054 DEFB123Q8N688 67 aa2.94□□□□□ -1.94
R3HDM1-204ENST00000410054 PRRC2CQ9Y520 2896 aaKnown RBP2.94□□□□□ -1.94
R3HDM1-204ENST00000410054 LCE2DQ5TA82 110 aaPredicted RBP2.93□□□□□ -1.94
R3HDM1-204ENST00000410054 DNAH1Q9P2D7 4330 aa2.92□□□□□ -1.94
R3HDM1-204ENST00000410054 BDP1A6H8Y1 2624 aa2.92□□□□□ -1.94
R3HDM1-204ENST00000410054 IGF2RP11717 2491 aa2.92□□□□□ -1.94
R3HDM1-204ENST00000410054 TPRXLQ17RH7 258 aa2.91□□□□□ -1.94
R3HDM1-204ENST00000410054 Q6ZSA8 131 aa2.91□□□□□ -1.94
R3HDM1-204ENST00000410054 LRBAP50851 2863 aa2.9□□□□□ -1.94
R3HDM1-204ENST00000410054 ACACBO00763 2458 aa2.9□□□□□ -1.94
R3HDM1-204ENST00000410054 SPRR1BP22528 89 aa2.9□□□□□ -1.94
R3HDM1-204ENST00000410054 KRTAP3-3Q9BYR6 98 aa2.89□□□□□ -1.95
R3HDM1-204ENST00000410054 KRTAP3-2Q9BYR7 98 aa2.89□□□□□ -1.95
R3HDM1-204ENST00000410054 AKAP13Q12802 2813 aa2.89□□□□□ -1.95
R3HDM1-204ENST00000410054 S4R3F8 94 aa2.89□□□□□ -1.95
R3HDM1-204ENST00000410054 PIEZO1Q92508 2521 aa2.89□□□□□ -1.95
R3HDM1-204ENST00000410054 K7EIL1 84 aa2.89□□□□□ -1.95
R3HDM1-204ENST00000410054 H0YAA0 97 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms