RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 A0A1B0GVX0 72 aa2.98□□□□□ -1.93
SF3B1-202ENST00000409915 JMJD7-PLA2G4BH0Y9G9 81 aa2.98□□□□□ -1.93
SF3B1-202ENST00000409915 TMEM256-PLSCR3K7ERE1 68 aa2.98□□□□□ -1.93
SF3B1-202ENST00000409915 BPY2O14599 106 aa2.98□□□□□ -1.93
SF3B1-202ENST00000409915 NDUFA1O15239 70 aa2.98□□□□□ -1.93
SF3B1-202ENST00000409915 IGHV3-30-3P0DP02 117 aa2.98□□□□□ -1.93
SF3B1-202ENST00000409915 S100A4P26447 101 aaKnown RBP2.98□□□□□ -1.93
SF3B1-202ENST00000409915 RPL36AP83881 106 aaKnown RBP2.98□□□□□ -1.93
SF3B1-202ENST00000409915 C7orf65Q6ZTY9 151 aa2.98□□□□□ -1.93
SF3B1-202ENST00000409915 ZNF625Q96I27 306 aaPredicted RBP2.98□□□□□ -1.93
SF3B1-202ENST00000409915 CHCHD7Q9BUK0 85 aa2.98□□□□□ -1.93
SF3B1-202ENST00000409915 CYP4F30PQ9H0H9 118 aa2.98□□□□□ -1.93
SF3B1-202ENST00000409915 KIF25-AS1Q9Y6Z4 181 aa2.98□□□□□ -1.93
SF3B1-202ENST00000409915 MUC4Q99102 2169 aa2.98□□□□□ -1.93
SF3B1-202ENST00000409915 HECTD4Q9Y4D8 3996 aa2.97□□□□□ -1.93
SF3B1-202ENST00000409915 TRGV4A0A0C4DH28 118 aa2.97□□□□□ -1.93
SF3B1-202ENST00000409915 M0R2N4 97 aa2.97□□□□□ -1.93
SF3B1-202ENST00000409915 TLX1NBP0CAT3 122 aa2.97□□□□□ -1.93
SF3B1-202ENST00000409915 FUSP35637 526 aaKnown RBP eCLIP2.97□□□□□ -1.93
SF3B1-202ENST00000409915 LINC00315P59091 139 aa2.97□□□□□ -1.93
SF3B1-202ENST00000409915 SYCNQ0VAF6 134 aa2.97□□□□□ -1.93
SF3B1-202ENST00000409915 FAM74A4Q5TZK3 123 aa2.97□□□□□ -1.93
SF3B1-202ENST00000409915 SOSTDC1Q6X4U4 206 aa2.97□□□□□ -1.93
SF3B1-202ENST00000409915 TMEM254Q8TBM7 123 aa2.97□□□□□ -1.93
SF3B1-202ENST00000409915 LINC00308Q8TCZ7 52 aa2.97□□□□□ -1.93
SF3B1-202ENST00000409915 NDUFA12Q9UI09 145 aa2.97□□□□□ -1.93
SF3B1-202ENST00000409915 FAT2Q9NYQ8 4349 aa2.97□□□□□ -1.93
SF3B1-202ENST00000409915 DNAH11Q96DT5 4516 aa2.96□□□□□ -1.93
SF3B1-202ENST00000409915 TRAV22A0A0B4J277 110 aa2.96□□□□□ -1.94
SF3B1-202ENST00000409915 A0A1B0GW54 56 aa2.96□□□□□ -1.94
SF3B1-202ENST00000409915 ASB16-AS1Q495Z4 193 aa2.96□□□□□ -1.94
SF3B1-202ENST00000409915 ENHOQ6UWT2 76 aa2.96□□□□□ -1.94
SF3B1-202ENST00000409915 UBL5Q9BZL1 73 aa2.96□□□□□ -1.94
SF3B1-202ENST00000409915 C14orf132Q9NPU4 83 aa2.96□□□□□ -1.94
SF3B1-202ENST00000409915 PRO0255Q9UI72 69 aa2.96□□□□□ -1.94
SF3B1-202ENST00000409915 SNURFQ9Y675 71 aa2.96□□□□□ -1.94
SF3B1-202ENST00000409915 LOC110117498A0A087WWA1 95 aa2.95□□□□□ -1.94
SF3B1-202ENST00000409915 C16orf90A8MZG2 172 aa2.95□□□□□ -1.94
SF3B1-202ENST00000409915 K7ERS5 55 aa2.95□□□□□ -1.94
SF3B1-202ENST00000409915 IGKV2-30P06310 120 aa2.95□□□□□ -1.94
SF3B1-202ENST00000409915 CCL18P55774 89 aa2.95□□□□□ -1.94
SF3B1-202ENST00000409915 C9orf129Q5T035 196 aaKnown RBP2.95□□□□□ -1.94
SF3B1-202ENST00000409915 Q5VV11 94 aa2.95□□□□□ -1.94
SF3B1-202ENST00000409915 C15orf56Q8N910 161 aa2.95□□□□□ -1.94
SF3B1-202ENST00000409915 RPL39LQ96EH5 51 aaKnown RBP2.95□□□□□ -1.94
SF3B1-202ENST00000409915 KRTAP1-5Q9BYS1 174 aa2.95□□□□□ -1.94
SF3B1-202ENST00000409915 DYNC1H1Q14204 4646 aaKnown RBP2.95□□□□□ -1.94
SF3B1-202ENST00000409915 NDUFAF8A1L188 74 aa2.94□□□□□ -1.94
SF3B1-202ENST00000409915 H3BNG1 76 aa2.94□□□□□ -1.94
SF3B1-202ENST00000409915 NREPQ16612 68 aa2.94□□□□□ -1.94
SF3B1-202ENST00000409915 SPANXN1Q5VSR9 72 aa2.94□□□□□ -1.94
SF3B1-202ENST00000409915 NTM-AS1Q6ZSK4 140 aa2.94□□□□□ -1.94
SF3B1-202ENST00000409915 WFDC10BQ8IUB3 73 aa2.94□□□□□ -1.94
SF3B1-202ENST00000409915 LINC00269Q8N2A0 174 aa2.94□□□□□ -1.94
SF3B1-202ENST00000409915 CIRBP-AS1Q8TBR5 109 aa2.94□□□□□ -1.94
SF3B1-202ENST00000409915 PKHD1P08F94 4074 aa2.93□□□□□ -1.94
SF3B1-202ENST00000409915 TRBV6-8A0A0A6YYG3 113 aa2.93□□□□□ -1.94
SF3B1-202ENST00000409915 NBDYA0A0U1RRE5 68 aa2.93□□□□□ -1.94
SF3B1-202ENST00000409915 TRBV6-4A0A1B0GX49 114 aa2.93□□□□□ -1.94
SF3B1-202ENST00000409915 PSCAO43653 123 aa2.93□□□□□ -1.94
SF3B1-202ENST00000409915 MGPP08493 103 aa2.93□□□□□ -1.94
SF3B1-202ENST00000409915 PDE6GP18545 87 aa2.93□□□□□ -1.94
SF3B1-202ENST00000409915 RPL39P62891 51 aaKnown RBP2.93□□□□□ -1.94
SF3B1-202ENST00000409915 Q6ZR54 194 aa2.93□□□□□ -1.94
SF3B1-202ENST00000409915 MIR7-3HGQ8N6C7 128 aa2.93□□□□□ -1.94
SF3B1-202ENST00000409915 ZCCHC13Q8WW36 166 aaKnown RBP2.93□□□□□ -1.94
SF3B1-202ENST00000409915 LIMD2Q9BT23 127 aa2.93□□□□□ -1.94
SF3B1-202ENST00000409915 DNAH5Q8TE73 4624 aa2.93□□□□□ -1.94
SF3B1-202ENST00000409915 RYR1P21817 5038 aa2.92□□□□□ -1.94
SF3B1-202ENST00000409915 LOC101927531A0A1B0GV80 90 aa2.92□□□□□ -1.94
SF3B1-202ENST00000409915 IGKV2-29A2NJV5 120 aaPredicted RBP2.92□□□□□ -1.94
SF3B1-202ENST00000409915 H3BQ85 93 aa2.92□□□□□ -1.94
SF3B1-202ENST00000409915 RTL8CO15255 209 aa2.92□□□□□ -1.94
SF3B1-202ENST00000409915 ELOF1P60002 83 aaKnown RBP2.92□□□□□ -1.94
SF3B1-202ENST00000409915 LINC01554Q52M75 96 aa2.92□□□□□ -1.94
SF3B1-202ENST00000409915 C1orf64Q8NEQ6 169 aa2.92□□□□□ -1.94
SF3B1-202ENST00000409915 DEFB104AQ8WTQ1 72 aa2.92□□□□□ -1.94
SF3B1-202ENST00000409915 ORMDL1Q9P0S3 153 aa2.92□□□□□ -1.94
SF3B1-202ENST00000409915 PKD1P98161 4303 aa2.92□□□□□ -1.94
SF3B1-202ENST00000409915 HERC2O95714 4834 aa2.91□□□□□ -1.94
SF3B1-202ENST00000409915 KIAA1109Q2LD37 5005 aa2.91□□□□□ -1.94
SF3B1-202ENST00000409915 A0A087WYN8 130 aa2.91□□□□□ -1.94
SF3B1-202ENST00000409915 A6NED7 52 aa2.91□□□□□ -1.94
SF3B1-202ENST00000409915 NCR3O14931 201 aa2.91□□□□□ -1.94
SF3B1-202ENST00000409915 C1orf134Q5TEV5 83 aa2.91□□□□□ -1.94
SF3B1-202ENST00000409915 Q6ZQT0 140 aa2.91□□□□□ -1.94
SF3B1-202ENST00000409915 ADM2Q7Z4H4 148 aa2.91□□□□□ -1.94
SF3B1-202ENST00000409915 TYMSOSQ8TAI1 123 aa2.91□□□□□ -1.94
SF3B1-202ENST00000409915 CDC42SE1Q9NRR8 79 aa2.91□□□□□ -1.94
SF3B1-202ENST00000409915 LRP1BQ9NZR2 4599 aa2.91□□□□□ -1.94
SF3B1-202ENST00000409915 TRBV10-1A0A0K0K1A3 114 aa2.9□□□□□ -1.95
SF3B1-202ENST00000409915 A8MWP4 228 aa2.9□□□□□ -1.95
SF3B1-202ENST00000409915 M0QY20 66 aa2.9□□□□□ -1.95
SF3B1-202ENST00000409915 CRPP02741 224 aa2.9□□□□□ -1.95
SF3B1-202ENST00000409915 HIGD2BQ4VC39 106 aa2.9□□□□□ -1.95
SF3B1-202ENST00000409915 LELP1Q5T871 98 aa2.9□□□□□ -1.95
SF3B1-202ENST00000409915 IGKV2-28A0A075B6P5 120 aa2.89□□□□□ -1.95
SF3B1-202ENST00000409915 HCG22E2RYF7 251 aa2.89□□□□□ -1.95
SF3B1-202ENST00000409915 IGKV2D-28P01615 120 aa2.89□□□□□ -1.95
SF3B1-202ENST00000409915 DNAH10OSP0CZ25 163 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms