RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP17.57■□□□□ 0.4
TRAF3IP1-203ENST00000409739 CD164Q04900 197 aa17.53■□□□□ 0.4
TRAF3IP1-203ENST00000409739 H0YGX0 51 aa17.51■□□□□ 0.39
TRAF3IP1-203ENST00000409739 LIMD2Q9BT23 127 aa17.51■□□□□ 0.39
TRAF3IP1-203ENST00000409739 A0A0G2JQZ4 141 aa17.5■□□□□ 0.39
TRAF3IP1-203ENST00000409739 FAM218AQ96MZ4 157 aa17.5■□□□□ 0.39
TRAF3IP1-203ENST00000409739 CDIP1Q9H305 208 aa17.5■□□□□ 0.39
TRAF3IP1-203ENST00000409739 F8WEM9 126 aa17.49■□□□□ 0.39
TRAF3IP1-203ENST00000409739 RNF213Q63HN8 5207 aa17.48■□□□□ 0.39
TRAF3IP1-203ENST00000409739 K7ERJ3 54 aa17.47■□□□□ 0.39
TRAF3IP1-203ENST00000409739 PPDPFLQ8WWR9 84 aa17.46■□□□□ 0.39
TRAF3IP1-203ENST00000409739 KRTAP13-3Q3SY46 172 aa17.45■□□□□ 0.38
TRAF3IP1-203ENST00000409739 TRIAP1O43715 76 aa17.44■□□□□ 0.38
TRAF3IP1-203ENST00000409739 SNCGO76070 127 aa17.42■□□□□ 0.38
TRAF3IP1-203ENST00000409739 SMIM6P0DI80 62 aa17.41■□□□□ 0.38
TRAF3IP1-203ENST00000409739 IGLV8-61A0A075B6I0 122 aa17.4■□□□□ 0.38
TRAF3IP1-203ENST00000409739 OCIAD2Q56VL3 154 aa17.38■□□□□ 0.37
TRAF3IP1-203ENST00000409739 A0A1B0GX51 115 aa17.37■□□□□ 0.37
TRAF3IP1-203ENST00000409739 Q5XG85 94 aa17.37■□□□□ 0.37
TRAF3IP1-203ENST00000409739 SNHG12Q9BXW3 62 aa17.37■□□□□ 0.37
TRAF3IP1-203ENST00000409739 Q6JHZ5 121 aa17.36■□□□□ 0.37
TRAF3IP1-203ENST00000409739 IGFL1Q6UW32 110 aa17.34■□□□□ 0.37
TRAF3IP1-203ENST00000409739 CLEC2BQ92478 149 aa17.33■□□□□ 0.36
TRAF3IP1-203ENST00000409739 PSMB2P49721 201 aa17.32■□□□□ 0.36
TRAF3IP1-203ENST00000409739 H3BUT2 72 aa17.28■□□□□ 0.36
TRAF3IP1-203ENST00000409739 COX6CP09669 75 aa17.25■□□□□ 0.35
TRAF3IP1-203ENST00000409739 MUC17Q685J3 4493 aa17.24■□□□□ 0.35
TRAF3IP1-203ENST00000409739 C1orf195Q5TG92 126 aa17.24■□□□□ 0.35
TRAF3IP1-203ENST00000409739 LOC105371267A0A1B0GV96 52 aa17.23■□□□□ 0.35
TRAF3IP1-203ENST00000409739 NDUFV3P56181 108 aaKnown RBP17.23■□□□□ 0.35
TRAF3IP1-203ENST00000409739 GHRHP01286 108 aa17.22■□□□□ 0.35
TRAF3IP1-203ENST00000409739 TRBV7-7A0A0K0K1E9 115 aa17.21■□□□□ 0.35
TRAF3IP1-203ENST00000409739 TCL1BO95988 128 aa17.21■□□□□ 0.35
TRAF3IP1-203ENST00000409739 DNAL4O96015 105 aa17.19■□□□□ 0.34
TRAF3IP1-203ENST00000409739 M0R143 59 aa17.18■□□□□ 0.34
TRAF3IP1-203ENST00000409739 FABP2P12104 132 aa17.18■□□□□ 0.34
TRAF3IP1-203ENST00000409739 MUC2Q02817 5179 aa17.16■□□□□ 0.34
TRAF3IP1-203ENST00000409739 ORMDL1Q9P0S3 153 aa17.15■□□□□ 0.34
TRAF3IP1-203ENST00000409739 XP32Q5T750 250 aa17.14■□□□□ 0.33
TRAF3IP1-203ENST00000409739 H3BMG7 143 aa17.12■□□□□ 0.33
TRAF3IP1-203ENST00000409739 ASB16-AS1Q495Z4 193 aa17.12■□□□□ 0.33
TRAF3IP1-203ENST00000409739 TSTD3H0UI37 97 aa17.11■□□□□ 0.33
TRAF3IP1-203ENST00000409739 C9orf92A6NGG3 77 aa17.09■□□□□ 0.33
TRAF3IP1-203ENST00000409739 SCGB1C2P0DMR2 95 aa17.09■□□□□ 0.33
TRAF3IP1-203ENST00000409739 H3BQ85 93 aa17.08■□□□□ 0.32
TRAF3IP1-203ENST00000409739 Q6Q795 121 aa17.08■□□□□ 0.32
TRAF3IP1-203ENST00000409739 LST1O00453 97 aa17.07■□□□□ 0.32
TRAF3IP1-203ENST00000409739 TRACP01848 142 aa17.07■□□□□ 0.32
TRAF3IP1-203ENST00000409739 TMEM256-PLSCR3K7ERE1 68 aa17.04■□□□□ 0.32
TRAF3IP1-203ENST00000409739 TEN1Q86WV5 123 aa17.04■□□□□ 0.32
TRAF3IP1-203ENST00000409739 SEC61BP60468 96 aaKnown RBP17.03■□□□□ 0.32
TRAF3IP1-203ENST00000409739 A0A1B0GV72 72 aa16.98■□□□□ 0.31
TRAF3IP1-203ENST00000409739 NAA38Q9BRA0 125 aaKnown RBP16.98■□□□□ 0.31
TRAF3IP1-203ENST00000409739 SS18L2Q9UHA2 77 aa16.97■□□□□ 0.31
TRAF3IP1-203ENST00000409739 UBE2V1Q13404 147 aa16.96■□□□□ 0.31
TRAF3IP1-203ENST00000409739 A0A1W2PNM2 257 aa16.95■□□□□ 0.3
TRAF3IP1-203ENST00000409739 A0A087WSZ3 146 aa16.93■□□□□ 0.3
TRAF3IP1-203ENST00000409739 ANKRD29Q8N6D5 301 aa16.93■□□□□ 0.3
TRAF3IP1-203ENST00000409739 A0A0U1RQV1 116 aa16.92■□□□□ 0.3
TRAF3IP1-203ENST00000409739 BATFQ16520 125 aa16.91■□□□□ 0.3
TRAF3IP1-203ENST00000409739 KRTAP4-1Q9BYQ7 146 aa16.88■□□□□ 0.29
TRAF3IP1-203ENST00000409739 ATXN8Q156A1 80 aa16.86■□□□□ 0.29
TRAF3IP1-203ENST00000409739 TRBV7-4A0A0J9YYF1 115 aa16.84■□□□□ 0.29
TRAF3IP1-203ENST00000409739 BAALC-AS2P0C853 105 aa16.84■□□□□ 0.29
TRAF3IP1-203ENST00000409739 Q96NJ1 140 aa16.81■□□□□ 0.28
TRAF3IP1-203ENST00000409739 PCOTHQ58A44 107 aa16.8■□□□□ 0.28
TRAF3IP1-203ENST00000409739 CCKP06307 115 aa16.79■□□□□ 0.28
TRAF3IP1-203ENST00000409739 LYRM7Q5U5X0 104 aa16.79■□□□□ 0.28
TRAF3IP1-203ENST00000409739 RBM3P98179 157 aaKnown RBP16.77■□□□□ 0.28
TRAF3IP1-203ENST00000409739 RPL37P61927 97 aaKnown RBP16.76■□□□□ 0.27
TRAF3IP1-203ENST00000409739 OBSCN-AS1Q96MR7 158 aa16.73■□□□□ 0.27
TRAF3IP1-203ENST00000409739 DSCR8Q96T75 97 aa16.72■□□□□ 0.27
TRAF3IP1-203ENST00000409739 FAT4Q6V0I7 4981 aa16.7■□□□□ 0.26
TRAF3IP1-203ENST00000409739 TRBV20-1A0A075B6N2 111 aa16.69■□□□□ 0.26
TRAF3IP1-203ENST00000409739 C9orf118A6NHY6 69 aa16.69■□□□□ 0.26
TRAF3IP1-203ENST00000409739 TAX1BP3O14907 124 aa16.69■□□□□ 0.26
TRAF3IP1-203ENST00000409739 VPS25Q9BRG1 176 aa16.68■□□□□ 0.26
TRAF3IP1-203ENST00000409739 SIGMAR1Q99720 223 aa16.65■□□□□ 0.26
TRAF3IP1-203ENST00000409739 C9JAW5 83 aa16.64■□□□□ 0.25
TRAF3IP1-203ENST00000409739 A0A1W2PPM0 123 aa16.6■□□□□ 0.25
TRAF3IP1-203ENST00000409739 JMJD7-PLA2G4BH0Y9G9 81 aa16.6■□□□□ 0.25
TRAF3IP1-203ENST00000409739 LCE2AQ5TA79 106 aaPredicted RBP16.6■□□□□ 0.25
TRAF3IP1-203ENST00000409739 LINC00472Q9H8W2 130 aa16.6■□□□□ 0.25
TRAF3IP1-203ENST00000409739 IGKV4-1P06312 121 aa16.59■□□□□ 0.25
TRAF3IP1-203ENST00000409739 Q75L30 129 aa16.58■□□□□ 0.24
TRAF3IP1-203ENST00000409739 Q6ZQT0 140 aa16.55■□□□□ 0.24
TRAF3IP1-203ENST00000409739 DEFB116Q30KQ4 102 aa16.54■□□□□ 0.24
TRAF3IP1-203ENST00000409739 LOC110117498A0A087WWA1 95 aa16.53■□□□□ 0.24
TRAF3IP1-203ENST00000409739 DSCR10P59022 87 aa16.52■□□□□ 0.24
TRAF3IP1-203ENST00000409739 C21orf62-AS1Q17RA5 79 aa16.49■□□□□ 0.23
TRAF3IP1-203ENST00000409739 C14orf132Q9NPU4 83 aa16.49■□□□□ 0.23
TRAF3IP1-203ENST00000409739 C20orf166-AS1Q96NR2 134 aa16.48■□□□□ 0.23
TRAF3IP1-203ENST00000409739 H3BT86 120 aa16.46■□□□□ 0.23
TRAF3IP1-203ENST00000409739 PDE6GP18545 87 aa16.46■□□□□ 0.23
TRAF3IP1-203ENST00000409739 MTURNQ8N3F0 131 aa16.46■□□□□ 0.23
TRAF3IP1-203ENST00000409739 A8MUU9 505 aa16.44■□□□□ 0.22
TRAF3IP1-203ENST00000409739 ATP11AUNQ6ZP68 121 aa16.44■□□□□ 0.22
TRAF3IP1-203ENST00000409739 LINC00313P59037 77 aa16.43■□□□□ 0.22
TRAF3IP1-203ENST00000409739 KRTAP19-2Q3LHN2 52 aa16.41■□□□□ 0.22
TRAF3IP1-203ENST00000409739 COL5A1-AS1Q5SY13 56 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms