RNA–Protein interactions for RNA: ENST00000407418.7

CBX6-202, Transcript of chromobox 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBX6, Length 6,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-202ENST00000407418 UNC80Q8N2C7 3258 aa10.01□□□□□ -0.81
CBX6-202ENST00000407418 LAMA2P24043 3122 aaKnown RBP10.01□□□□□ -0.81
CBX6-202ENST00000407418 PRAC1Q96KF2 57 aa10□□□□□ -0.81
CBX6-202ENST00000407418 LINC01558Q9Y6Z2 57 aa10□□□□□ -0.81
CBX6-202ENST00000407418 SPRR1BP22528 89 aa9.99□□□□□ -0.81
CBX6-202ENST00000407418 KRTAP21-3Q3LHN1 58 aa9.97□□□□□ -0.81
CBX6-202ENST00000407418 FLNBO75369 2602 aaKnown RBP9.97□□□□□ -0.81
CBX6-202ENST00000407418 SPINK7P58062 85 aa9.95□□□□□ -0.82
CBX6-202ENST00000407418 MMP24-AS1A0A0U1RRL7 71 aa9.95□□□□□ -0.82
CBX6-202ENST00000407418 PRUNE2Q8WUY3 3088 aa9.95□□□□□ -0.82
CBX6-202ENST00000407418 Q8N9P0 234 aaPredicted RBP9.94□□□□□ -0.82
CBX6-202ENST00000407418 Q6ZR54 194 aa9.93□□□□□ -0.82
CBX6-202ENST00000407418 CYSTM1Q9H1C7 97 aa9.92□□□□□ -0.82
CBX6-202ENST00000407418 R4GN34 69 aa9.92□□□□□ -0.82
CBX6-202ENST00000407418 Q5VV11 94 aa9.91□□□□□ -0.82
CBX6-202ENST00000407418 TRANK1O15050 2925 aa9.89□□□□□ -0.83
CBX6-202ENST00000407418 DMAC1Q96GE9 116 aa9.89□□□□□ -0.83
CBX6-202ENST00000407418 Q5W150 140 aa9.88□□□□□ -0.83
CBX6-202ENST00000407418 HELZ2Q9BYK8 2649 aaKnown RBP9.87□□□□□ -0.83
CBX6-202ENST00000407418 MGAM2Q2M2H8 2515 aa9.87□□□□□ -0.83
CBX6-202ENST00000407418 KRTAP26-1Q6PEX3 210 aa9.86□□□□□ -0.83
CBX6-202ENST00000407418 SZT2Q5T011 3432 aa9.86□□□□□ -0.83
CBX6-202ENST00000407418 XIRP2A4UGR9 3374 aa9.85□□□□□ -0.83
CBX6-202ENST00000407418 FLNAP21333 2647 aaKnown RBP9.84□□□□□ -0.83
CBX6-202ENST00000407418 A0A0A0MQY5 61 aa9.83□□□□□ -0.84
CBX6-202ENST00000407418 LINC00472Q9H8W2 130 aa9.81□□□□□ -0.84
CBX6-202ENST00000407418 Q8NDZ9 215 aa9.81□□□□□ -0.84
CBX6-202ENST00000407418 DNAH14Q0VDD8 3507 aa9.81□□□□□ -0.84
CBX6-202ENST00000407418 PLAC4Q8WY50 150 aa9.8□□□□□ -0.84
CBX6-202ENST00000407418 ITPR3Q14573 2671 aa9.79□□□□□ -0.84
CBX6-202ENST00000407418 A0A0C4DFX4 3053 aa9.76□□□□□ -0.85
CBX6-202ENST00000407418 PRRC2CQ9Y520 2896 aaKnown RBP9.72□□□□□ -0.85
CBX6-202ENST00000407418 M0QZ58 72 aa9.71□□□□□ -0.85
CBX6-202ENST00000407418 SPTBN5Q9NRC6 3674 aaKnown RBP9.7□□□□□ -0.86
CBX6-202ENST00000407418 USP24Q9UPU5 2620 aa9.7□□□□□ -0.86
CBX6-202ENST00000407418 PANO1I0J062 215 aa9.68□□□□□ -0.86
CBX6-202ENST00000407418 ROMO1P60602 79 aa9.68□□□□□ -0.86
CBX6-202ENST00000407418 RPS29P62273 56 aaKnown RBP9.67□□□□□ -0.86
CBX6-202ENST00000407418 A0A087X002 238 aa9.62□□□□□ -0.87
CBX6-202ENST00000407418 MAST4O15021 2626 aa9.6□□□□□ -0.87
CBX6-202ENST00000407418 ADM2Q7Z4H4 148 aa9.6□□□□□ -0.87
CBX6-202ENST00000407418 H1FX-AS1Q4G0G2 97 aa9.59□□□□□ -0.87
CBX6-202ENST00000407418 TRIOO75962 3097 aa9.59□□□□□ -0.87
CBX6-202ENST00000407418 ATRQ13535 2644 aa9.58□□□□□ -0.88
CBX6-202ENST00000407418 RPL37P61927 97 aaKnown RBP9.58□□□□□ -0.88
CBX6-202ENST00000407418 Q6ZRN7 208 aaPredicted RBP9.57□□□□□ -0.88
CBX6-202ENST00000407418 CFAP46Q8IYW2 2715 aa9.56□□□□□ -0.88
CBX6-202ENST00000407418 VCANP13611 3396 aa9.56□□□□□ -0.88
CBX6-202ENST00000407418 KRTAP4-16G5E9R7 235 aaPredicted RBP9.53□□□□□ -0.88
CBX6-202ENST00000407418 EYSQ5T1H1 3165 aa9.52□□□□□ -0.88
CBX6-202ENST00000407418 LAMA1P25391 3075 aa9.51□□□□□ -0.89
CBX6-202ENST00000407418 CELSR3Q9NYQ7 3312 aa9.5□□□□□ -0.89
CBX6-202ENST00000407418 ASB16-AS1Q495Z4 193 aa9.5□□□□□ -0.89
CBX6-202ENST00000407418 CFAP54Q96N23 3096 aa9.49□□□□□ -0.89
CBX6-202ENST00000407418 WDFY4Q6ZS81 3184 aa9.47□□□□□ -0.89
CBX6-202ENST00000407418 SPATA8Q6RVD6 105 aa9.45□□□□□ -0.9
CBX6-202ENST00000407418 MGAQ8IWI9 3026 aa9.44□□□□□ -0.9
CBX6-202ENST00000407418 COL6A3P12111 3177 aa9.43□□□□□ -0.9
CBX6-202ENST00000407418 BAHCC1Q9P281 2608 aa9.4□□□□□ -0.9
CBX6-202ENST00000407418 C20orf166-AS1Q96NR2 134 aa9.38□□□□□ -0.91
CBX6-202ENST00000407418 USP34Q70CQ2 3546 aa9.38□□□□□ -0.91
CBX6-202ENST00000407418 REV3LO60673 3130 aa9.37□□□□□ -0.91
CBX6-202ENST00000407418 VPS13AQ96RL7 3174 aa9.36□□□□□ -0.91
CBX6-202ENST00000407418 KRTAP16-1A8MUX0 517 aa9.36□□□□□ -0.91
CBX6-202ENST00000407418 TNRC18O15417 2968 aaPredicted RBP9.36□□□□□ -0.91
CBX6-202ENST00000407418 AKAP13Q12802 2813 aa9.36□□□□□ -0.91
CBX6-202ENST00000407418 SPEGQ15772 3267 aa9.35□□□□□ -0.91
CBX6-202ENST00000407418 KRTAP29-1A8MX34 341 aaPredicted RBP9.33□□□□□ -0.92
CBX6-202ENST00000407418 KRTAP11-1Q8IUC1 163 aa9.33□□□□□ -0.92
CBX6-202ENST00000407418 KRTAP13-2Q52LG2 175 aa9.32□□□□□ -0.92
CBX6-202ENST00000407418 A8MUU9 505 aa9.32□□□□□ -0.92
CBX6-202ENST00000407418 MYO15AQ9UKN7 3530 aa9.32□□□□□ -0.92
CBX6-202ENST00000407418 A6NN06 94 aa9.31□□□□□ -0.92
CBX6-202ENST00000407418 KRTAP25-1Q3LHN0 102 aa9.3□□□□□ -0.92
CBX6-202ENST00000407418 STAB1Q9NY15 2570 aa9.26□□□□□ -0.93
CBX6-202ENST00000407418 ZNF292O60281 2723 aa9.24□□□□□ -0.93
CBX6-202ENST00000407418 NOTCH2NLQ7Z3S9 236 aa9.24□□□□□ -0.93
CBX6-202ENST00000407418 KRTAP13-1Q8IUC0 172 aa9.23□□□□□ -0.93
CBX6-202ENST00000407418 FREM2Q5SZK8 3169 aa9.19□□□□□ -0.94
CBX6-202ENST00000407418 KRTAP7-1Q8IUC3 87 aa9.18□□□□□ -0.94
CBX6-202ENST00000407418 A8MU10 97 aa9.18□□□□□ -0.94
CBX6-202ENST00000407418 TEX15Q9BXT5 2789 aa9.17□□□□□ -0.94
CBX6-202ENST00000407418 TEP1Q99973 2627 aaKnown RBP9.14□□□□□ -0.95
CBX6-202ENST00000407418 FRYLO94915 3013 aa9.1□□□□□ -0.95
CBX6-202ENST00000407418 COL6A5A8TX70 2615 aa9.1□□□□□ -0.95
CBX6-202ENST00000407418 UNC79Q9P2D8 2635 aa9.09□□□□□ -0.95
CBX6-202ENST00000407418 DSPP15924 2871 aaKnown RBP9.09□□□□□ -0.95
CBX6-202ENST00000407418 NDUFAF8A1L188 74 aa9.08□□□□□ -0.96
CBX6-202ENST00000407418 BOD1L1Q8NFC6 3051 aa9.08□□□□□ -0.96
CBX6-202ENST00000407418 SETXQ7Z333 2677 aaKnown RBP9.07□□□□□ -0.96
CBX6-202ENST00000407418 IGSF10Q6WRI0 2623 aa9.04□□□□□ -0.96
CBX6-202ENST00000407418 KMT2BQ9UMN6 2715 aaPredicted RBP9.03□□□□□ -0.96
CBX6-202ENST00000407418 FRYQ5TBA9 3013 aa9.02□□□□□ -0.97
CBX6-202ENST00000407418 TNP1P09430 55 aa9□□□□□ -0.97
CBX6-202ENST00000407418 NBEAL1Q6ZS30 2694 aa8.99□□□□□ -0.97
CBX6-202ENST00000407418 XP32Q5T750 250 aa8.97□□□□□ -0.97
CBX6-202ENST00000407418 TPRXLQ17RH7 258 aa8.96□□□□□ -0.97
CBX6-202ENST00000407418 CENPEQ02224 2701 aa8.95□□□□□ -0.98
CBX6-202ENST00000407418 DMXL2Q8TDJ6 3036 aa8.94□□□□□ -0.98
CBX6-202ENST00000407418 DMXL1Q9Y485 3027 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms