RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 TOMM7Q9P0U1 55 aa3.09□□□□□ -1.92
CNGA1-202ENST00000402813 CDH23Q9H251 3354 aa3.08□□□□□ -1.92
CNGA1-202ENST00000402813 DMXL1Q9Y485 3027 aa3.08□□□□□ -1.92
CNGA1-202ENST00000402813 DOPEY2Q9Y3R5 2298 aa3.08□□□□□ -1.92
CNGA1-202ENST00000402813 Q6ZRX8 168 aa3.08□□□□□ -1.92
CNGA1-202ENST00000402813 PIEZO2Q9H5I5 2752 aa3.08□□□□□ -1.92
CNGA1-202ENST00000402813 C6orf48Q9UBA6 75 aa3.07□□□□□ -1.92
CNGA1-202ENST00000402813 TENM4Q6N022 2769 aa3.07□□□□□ -1.92
CNGA1-202ENST00000402813 TEX15Q9BXT5 2789 aa3.07□□□□□ -1.92
CNGA1-202ENST00000402813 CEP295Q9C0D2 2601 aa3.07□□□□□ -1.92
CNGA1-202ENST00000402813 SPTAN1Q13813 2472 aaKnown RBP3.07□□□□□ -1.92
CNGA1-202ENST00000402813 KRTAP11-1Q8IUC1 163 aa3.07□□□□□ -1.92
CNGA1-202ENST00000402813 CREBBPQ92793 2442 aa3.07□□□□□ -1.92
CNGA1-202ENST00000402813 DEFB131BA0A096LNP1 70 aa3.06□□□□□ -1.92
CNGA1-202ENST00000402813 ANAPC11Q9NYG5 84 aa3.06□□□□□ -1.92
CNGA1-202ENST00000402813 CNTRLQ7Z7A1 2325 aa3.06□□□□□ -1.92
CNGA1-202ENST00000402813 ABCA2Q9BZC7 2435 aa3.06□□□□□ -1.92
CNGA1-202ENST00000402813 FBN2P35556 2912 aa3.05□□□□□ -1.92
CNGA1-202ENST00000402813 IGF2RP11717 2491 aa3.05□□□□□ -1.92
CNGA1-202ENST00000402813 XIRP2A4UGR9 3374 aa3.05□□□□□ -1.92
CNGA1-202ENST00000402813 ITPR1Q14643 2758 aa3.05□□□□□ -1.92
CNGA1-202ENST00000402813 URB1O60287 2271 aaKnown RBP3.05□□□□□ -1.92
CNGA1-202ENST00000402813 IGKV2D-30A0A075B6S6 120 aa3.05□□□□□ -1.92
CNGA1-202ENST00000402813 KRTAP29-1A8MX34 341 aaPredicted RBP3.05□□□□□ -1.92
CNGA1-202ENST00000402813 ANGP03950 147 aaKnown RBP3.04□□□□□ -1.92
CNGA1-202ENST00000402813 KRTAP19-4Q3LI73 84 aa3.04□□□□□ -1.92
CNGA1-202ENST00000402813 C10orf99Q6UWK7 81 aa3.04□□□□□ -1.92
CNGA1-202ENST00000402813 ITPR3Q14573 2671 aa3.04□□□□□ -1.92
CNGA1-202ENST00000402813 A0A096LPF7 62 aa3.03□□□□□ -1.92
CNGA1-202ENST00000402813 LY6G6CO95867 125 aa3.03□□□□□ -1.92
CNGA1-202ENST00000402813 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.03□□□□□ -1.92
CNGA1-202ENST00000402813 PRB2P02812 416 aaPredicted RBP3.03□□□□□ -1.92
CNGA1-202ENST00000402813 DNAH14Q0VDD8 3507 aa3.03□□□□□ -1.92
CNGA1-202ENST00000402813 UNQ6190/PRO20217Q6UXQ8 127 aa3.02□□□□□ -1.93
CNGA1-202ENST00000402813 UBR5O95071 2799 aaPredicted RBP3.02□□□□□ -1.93
CNGA1-202ENST00000402813 HTN1P15515 57 aa3.02□□□□□ -1.93
CNGA1-202ENST00000402813 DSCR10P59022 87 aa3.02□□□□□ -1.93
CNGA1-202ENST00000402813 DSPP15924 2871 aaKnown RBP3.02□□□□□ -1.93
CNGA1-202ENST00000402813 FRYQ5TBA9 3013 aa3.01□□□□□ -1.93
CNGA1-202ENST00000402813 CFAP46Q8IYW2 2715 aa3.01□□□□□ -1.93
CNGA1-202ENST00000402813 ABCA1O95477 2261 aa3.01□□□□□ -1.93
CNGA1-202ENST00000402813 KRTAP10-8P60410 259 aa3.01□□□□□ -1.93
CNGA1-202ENST00000402813 KRTAP1-1Q07627 177 aa3.01□□□□□ -1.93
CNGA1-202ENST00000402813 PCNX1Q96RV3 2341 aa3.01□□□□□ -1.93
CNGA1-202ENST00000402813 IGKV2D-24A0A075B6R9 120 aa3.01□□□□□ -1.93
CNGA1-202ENST00000402813 ZZEF1O43149 2961 aa3.01□□□□□ -1.93
CNGA1-202ENST00000402813 NBEAQ8NFP9 2946 aa3□□□□□ -1.93
CNGA1-202ENST00000402813 DEFB136Q30KP8 78 aa3□□□□□ -1.93
CNGA1-202ENST00000402813 COL6A6A6NMZ7 2263 aa3□□□□□ -1.93
CNGA1-202ENST00000402813 SPEGQ15772 3267 aa2.99□□□□□ -1.93
CNGA1-202ENST00000402813 Q8N9L7 120 aa2.98□□□□□ -1.93
CNGA1-202ENST00000402813 TRIOO75962 3097 aa2.98□□□□□ -1.93
CNGA1-202ENST00000402813 MYO15AQ9UKN7 3530 aa2.98□□□□□ -1.93
CNGA1-202ENST00000402813 NOTCH2Q04721 2471 aa2.98□□□□□ -1.93
CNGA1-202ENST00000402813 SSBP3-AS1Q7Z2R9 100 aa2.98□□□□□ -1.93
CNGA1-202ENST00000402813 PLAC4Q8WY50 150 aa2.98□□□□□ -1.93
CNGA1-202ENST00000402813 ICE1Q9Y2F5 2266 aa2.98□□□□□ -1.93
CNGA1-202ENST00000402813 DEFB130BP0DP73 79 aa2.97□□□□□ -1.93
CNGA1-202ENST00000402813 DEFB130AP0DP74 79 aa2.97□□□□□ -1.93
CNGA1-202ENST00000402813 WNK2Q9Y3S1 2297 aa2.97□□□□□ -1.93
CNGA1-202ENST00000402813 APC2O95996 2303 aa2.96□□□□□ -1.94
CNGA1-202ENST00000402813 MED13LQ71F56 2210 aa2.96□□□□□ -1.94
CNGA1-202ENST00000402813 PTPRQQ9UMZ3 2332 aa2.96□□□□□ -1.94
CNGA1-202ENST00000402813 POLQO75417 2590 aa2.96□□□□□ -1.94
CNGA1-202ENST00000402813 PKDREJQ9NTG1 2253 aa2.95□□□□□ -1.94
CNGA1-202ENST00000402813 DMDP11532 3685 aa2.95□□□□□ -1.94
CNGA1-202ENST00000402813 ACACAQ13085 2346 aa2.95□□□□□ -1.94
CNGA1-202ENST00000402813 DEFB104AQ8WTQ1 72 aa2.94□□□□□ -1.94
CNGA1-202ENST00000402813 ASPMQ8IZT6 3477 aa2.94□□□□□ -1.94
CNGA1-202ENST00000402813 CLPSL2Q6UWE3 100 aa2.94□□□□□ -1.94
CNGA1-202ENST00000402813 KRTAP10-2P60368 255 aa2.94□□□□□ -1.94
CNGA1-202ENST00000402813 KALRNO60229 2985 aa2.93□□□□□ -1.94
CNGA1-202ENST00000402813 IGFL1Q6UW32 110 aa2.93□□□□□ -1.94
CNGA1-202ENST00000402813 Q6ZRN7 208 aaPredicted RBP2.93□□□□□ -1.94
CNGA1-202ENST00000402813 KRTAP13-1Q8IUC0 172 aa2.93□□□□□ -1.94
CNGA1-202ENST00000402813 VPS13AQ96RL7 3174 aa2.93□□□□□ -1.94
CNGA1-202ENST00000402813 AKAP13Q12802 2813 aa2.92□□□□□ -1.94
CNGA1-202ENST00000402813 LRRK2Q5S007 2527 aa2.92□□□□□ -1.94
CNGA1-202ENST00000402813 MMP24-AS1A0A0U1RRL7 71 aa2.92□□□□□ -1.94
CNGA1-202ENST00000402813 K7EQZ3 153 aa2.92□□□□□ -1.94
CNGA1-202ENST00000402813 KRTAP13-2Q52LG2 175 aa2.92□□□□□ -1.94
CNGA1-202ENST00000402813 SETD2Q9BYW2 2564 aaPredicted RBP2.92□□□□□ -1.94
CNGA1-202ENST00000402813 DMXL2Q8TDJ6 3036 aa2.92□□□□□ -1.94
CNGA1-202ENST00000402813 SPG11Q96JI7 2443 aa2.91□□□□□ -1.94
CNGA1-202ENST00000402813 SMG1Q96Q15 3661 aaKnown RBP2.9□□□□□ -1.94
CNGA1-202ENST00000402813 FRYLO94915 3013 aa2.9□□□□□ -1.94
CNGA1-202ENST00000402813 KRTAP12-2P59991 146 aa2.9□□□□□ -1.95
CNGA1-202ENST00000402813 USP9YO00507 2555 aaPredicted RBP2.89□□□□□ -1.95
CNGA1-202ENST00000402813 DEFB135Q30KP9 77 aa2.89□□□□□ -1.95
CNGA1-202ENST00000402813 LCE5AQ5TCM9 118 aa2.89□□□□□ -1.95
CNGA1-202ENST00000402813 NF1P21359 2839 aa2.89□□□□□ -1.95
CNGA1-202ENST00000402813 KRTAP10-3P60369 221 aa2.89□□□□□ -1.95
CNGA1-202ENST00000402813 RPS29P62273 56 aaKnown RBP2.89□□□□□ -1.95
CNGA1-202ENST00000402813 WFDC10BQ8IUB3 73 aa2.89□□□□□ -1.95
CNGA1-202ENST00000402813 TLN1Q9Y490 2541 aaKnown RBP2.89□□□□□ -1.95
CNGA1-202ENST00000402813 F8P00451 2351 aa2.89□□□□□ -1.95
CNGA1-202ENST00000402813 KRTAP13-3Q3SY46 172 aa2.88□□□□□ -1.95
CNGA1-202ENST00000402813 MTORP42345 2549 aa2.88□□□□□ -1.95
CNGA1-202ENST00000402813 MRPL34Q9BQ48 92 aaKnown RBP2.87□□□□□ -1.95
CNGA1-202ENST00000402813 HIVEP3Q5T1R4 2406 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms