RNA–Protein interactions for RNA: ENST00000402468.3

C1GALT1-202, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene C1GALT1, Length 930 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-202ENST00000402468 LMTK2Q8IWU2 1503 aa-0.06□□□□□ -2.42
C1GALT1-202ENST00000402468 COL6A3P12111 3177 aa-0.06□□□□□ -2.42
C1GALT1-202ENST00000402468 UGGT2Q9NYU1 1516 aa-0.07□□□□□ -2.42
C1GALT1-202ENST00000402468 AKAP13Q12802 2813 aa-0.07□□□□□ -2.42
C1GALT1-202ENST00000402468 PDCD5O14737 125 aa-0.07□□□□□ -2.42
C1GALT1-202ENST00000402468 DSPP15924 2871 aaKnown RBP-0.07□□□□□ -2.42
C1GALT1-202ENST00000402468 ANKRD50Q9ULJ7 1429 aa-0.07□□□□□ -2.42
C1GALT1-202ENST00000402468 LRP1BQ9NZR2 4599 aa-0.07□□□□□ -2.42
C1GALT1-202ENST00000402468 CREBBPQ92793 2442 aa-0.07□□□□□ -2.42
C1GALT1-202ENST00000402468 WIZO95785 1651 aa-0.08□□□□□ -2.42
C1GALT1-202ENST00000402468 TNRC18O15417 2968 aaPredicted RBP-0.08□□□□□ -2.42
C1GALT1-202ENST00000402468 PRRC2CQ9Y520 2896 aaKnown RBP-0.08□□□□□ -2.42
C1GALT1-202ENST00000402468 DEFB130BP0DP73 79 aa-0.08□□□□□ -2.42
C1GALT1-202ENST00000402468 DEFB130AP0DP74 79 aa-0.08□□□□□ -2.42
C1GALT1-202ENST00000402468 CRIP1P50238 77 aa-0.08□□□□□ -2.42
C1GALT1-202ENST00000402468 UBL5Q9BZL1 73 aa-0.08□□□□□ -2.42
C1GALT1-202ENST00000402468 GNG13Q9P2W3 67 aa-0.08□□□□□ -2.42
C1GALT1-202ENST00000402468 DIP2AQ14689 1571 aa-0.08□□□□□ -2.42
C1GALT1-202ENST00000402468 NRAPQ86VF7 1730 aa-0.08□□□□□ -2.42
C1GALT1-202ENST00000402468 ITSN1Q15811 1721 aa-0.09□□□□□ -2.42
C1GALT1-202ENST00000402468 PLXNC1O60486 1568 aa-0.09□□□□□ -2.42
C1GALT1-202ENST00000402468 SPG11Q96JI7 2443 aa-0.09□□□□□ -2.42
C1GALT1-202ENST00000402468 DEFB131BA0A096LNP1 70 aa-0.09□□□□□ -2.42
C1GALT1-202ENST00000402468 RALGAPBQ86X10 1494 aa-0.1□□□□□ -2.42
C1GALT1-202ENST00000402468 PARP4Q9UKK3 1724 aaKnown RBP-0.1□□□□□ -2.42
C1GALT1-202ENST00000402468 SPTBN4Q9H254 2564 aa-0.1□□□□□ -2.43
C1GALT1-202ENST00000402468 IAPPP10997 89 aa-0.1□□□□□ -2.43
C1GALT1-202ENST00000402468 ATXN8Q156A1 80 aa-0.1□□□□□ -2.43
C1GALT1-202ENST00000402468 KCNQ1DNQ9H478 68 aa-0.1□□□□□ -2.43
C1GALT1-202ENST00000402468 HFM1A2PYH4 1435 aa-0.11□□□□□ -2.43
C1GALT1-202ENST00000402468 MUC12Q9UKN1 5478 aa-0.11□□□□□ -2.43
C1GALT1-202ENST00000402468 DEPDC5O75140 1603 aa-0.11□□□□□ -2.43
C1GALT1-202ENST00000402468 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.11□□□□□ -2.43
C1GALT1-202ENST00000402468 MRPL33O75394 65 aaKnown RBP-0.11□□□□□ -2.43
C1GALT1-202ENST00000402468 CDC42BPGQ6DT37 1551 aa-0.11□□□□□ -2.43
C1GALT1-202ENST00000402468 DUOX2Q9NRD8 1548 aa-0.12□□□□□ -2.43
C1GALT1-202ENST00000402468 LYNX1G3V0Z9 82 aa-0.12□□□□□ -2.43
C1GALT1-202ENST00000402468 MAP1AP78559 2803 aaPredicted RBP-0.13□□□□□ -2.43
C1GALT1-202ENST00000402468 KRTAP6-2Q3LI66 62 aa-0.13□□□□□ -2.43
C1GALT1-202ENST00000402468 MUC2Q02817 5179 aa-0.13□□□□□ -2.43
C1GALT1-202ENST00000402468 SETD2Q9BYW2 2564 aaPredicted RBP-0.13□□□□□ -2.43
C1GALT1-202ENST00000402468 PCLOQ9Y6V0 5065 aa-0.14□□□□□ -2.43
C1GALT1-202ENST00000402468 NBEAL1Q6ZS30 2694 aa-0.14□□□□□ -2.43
C1GALT1-202ENST00000402468 STAB2Q8WWQ8 2551 aa-0.14□□□□□ -2.43
C1GALT1-202ENST00000402468 ETDCA0A1B0GVM5 59 aa-0.14□□□□□ -2.43
C1GALT1-202ENST00000402468 SONP18583 2426 aaKnown RBP-0.14□□□□□ -2.43
C1GALT1-202ENST00000402468 SVEP1Q4LDE5 3571 aa-0.15□□□□□ -2.43
C1GALT1-202ENST00000402468 ABCA9Q8IUA7 1624 aa-0.16□□□□□ -2.43
C1GALT1-202ENST00000402468 ASXL1Q8IXJ9 1541 aa-0.16□□□□□ -2.43
C1GALT1-202ENST00000402468 PKD1L2Q7Z442 2459 aa-0.16□□□□□ -2.43
C1GALT1-202ENST00000402468 H3BNG1 76 aa-0.16□□□□□ -2.44
C1GALT1-202ENST00000402468 SRRM2Q9UQ35 2752 aaKnown RBP-0.16□□□□□ -2.44
C1GALT1-202ENST00000402468 BPTFQ12830 3046 aa-0.16□□□□□ -2.44
C1GALT1-202ENST00000402468 CEP290O15078 2479 aa-0.16□□□□□ -2.44
C1GALT1-202ENST00000402468 KMT2CQ8NEZ4 4911 aaKnown RBP-0.17□□□□□ -2.44
C1GALT1-202ENST00000402468 NF1P21359 2839 aa-0.17□□□□□ -2.44
C1GALT1-202ENST00000402468 RNF17Q9BXT8 1623 aaKnown RBP-0.17□□□□□ -2.44
C1GALT1-202ENST00000402468 ZC3H13Q5T200 1668 aaKnown RBP-0.18□□□□□ -2.44
C1GALT1-202ENST00000402468 KRTAP6-1Q3LI64 71 aa-0.18□□□□□ -2.44
C1GALT1-202ENST00000402468 USH2AO75445 5202 aa-0.19□□□□□ -2.44
C1GALT1-202ENST00000402468 ANKRD36CQ5JPF3 1778 aa-0.19□□□□□ -2.44
C1GALT1-202ENST00000402468 SPRR2AP35326 72 aa-0.19□□□□□ -2.44
C1GALT1-202ENST00000402468 PRLHP81277 87 aa-0.19□□□□□ -2.44
C1GALT1-202ENST00000402468 DEFB106AQ8N104 65 aa-0.19□□□□□ -2.44
C1GALT1-202ENST00000402468 LYSTQ99698 3801 aa-0.19□□□□□ -2.44
C1GALT1-202ENST00000402468 MADDQ8WXG6 1647 aa-0.2□□□□□ -2.44
C1GALT1-202ENST00000402468 MINOS1Q5TGZ0 78 aa-0.2□□□□□ -2.44
C1GALT1-202ENST00000402468 ZZEF1O43149 2961 aa-0.2□□□□□ -2.44
C1GALT1-202ENST00000402468 NHSQ6T4R5 1651 aa-0.21□□□□□ -2.44
C1GALT1-202ENST00000402468 RYR3Q15413 4870 aa-0.21□□□□□ -2.44
C1GALT1-202ENST00000402468 RYR1P21817 5038 aa-0.21□□□□□ -2.44
C1GALT1-202ENST00000402468 KIAA0586Q9BVV6 1533 aa-0.21□□□□□ -2.44
C1GALT1-202ENST00000402468 LINC01549A6NIU2 74 aa-0.21□□□□□ -2.44
C1GALT1-202ENST00000402468 S4R3F8 94 aa-0.21□□□□□ -2.44
C1GALT1-202ENST00000402468 TGP01266 2768 aa-0.21□□□□□ -2.44
C1GALT1-202ENST00000402468 FASNP49327 2511 aaKnown RBP-0.21□□□□□ -2.44
C1GALT1-202ENST00000402468 EPG5Q9HCE0 2579 aa-0.21□□□□□ -2.44
C1GALT1-202ENST00000402468 KIAA1109Q2LD37 5005 aa-0.21□□□□□ -2.44
C1GALT1-202ENST00000402468 EPPK1P58107 5090 aaKnown RBP-0.22□□□□□ -2.44
C1GALT1-202ENST00000402468 KRTAP19-7Q3SYF9 63 aa-0.22□□□□□ -2.44
C1GALT1-202ENST00000402468 HERC2O95714 4834 aa-0.22□□□□□ -2.44
C1GALT1-202ENST00000402468 MTORP42345 2549 aa-0.22□□□□□ -2.44
C1GALT1-202ENST00000402468 ACACAQ13085 2346 aa-0.22□□□□□ -2.45
C1GALT1-202ENST00000402468 UBR4Q5T4S7 5183 aa-0.23□□□□□ -2.45
C1GALT1-202ENST00000402468 THOC2Q8NI27 1593 aaKnown RBP-0.23□□□□□ -2.45
C1GALT1-202ENST00000402468 DMXL1Q9Y485 3027 aa-0.23□□□□□ -2.45
C1GALT1-202ENST00000402468 PKHD1P08F94 4074 aa-0.23□□□□□ -2.45
C1GALT1-202ENST00000402468 RNF213Q63HN8 5207 aa-0.23□□□□□ -2.45
C1GALT1-202ENST00000402468 LRRK2Q5S007 2527 aa-0.23□□□□□ -2.45
C1GALT1-202ENST00000402468 ABCC6O95255 1503 aa-0.23□□□□□ -2.45
C1GALT1-202ENST00000402468 PKD1P98161 4303 aa-0.24□□□□□ -2.45
C1GALT1-202ENST00000402468 DNMBPQ6XZF7 1577 aa-0.24□□□□□ -2.45
C1GALT1-202ENST00000402468 HERC1Q15751 4861 aa-0.24□□□□□ -2.45
C1GALT1-202ENST00000402468 GCN1Q92616 2671 aaKnown RBP-0.25□□□□□ -2.45
C1GALT1-202ENST00000402468 SPRR2EP22531 72 aa-0.25□□□□□ -2.45
C1GALT1-202ENST00000402468 RPS27P42677 84 aaKnown RBP-0.25□□□□□ -2.45
C1GALT1-202ENST00000402468 WT1-ASQ06250 92 aa-0.25□□□□□ -2.45
C1GALT1-202ENST00000402468 KRTAP20-2Q3LI61 65 aa-0.25□□□□□ -2.45
C1GALT1-202ENST00000402468 RPS27LQ71UM5 84 aaKnown RBP-0.25□□□□□ -2.45
C1GALT1-202ENST00000402468 INO80Q9ULG1 1556 aaPredicted RBP-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms