RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 RNF213Q63HN8 5207 aa10.84□□□□□ -0.67
RTN4-207ENST00000402434 H0YGX0 51 aa10.84□□□□□ -0.67
RTN4-207ENST00000402434 CD164Q04900 197 aa10.84□□□□□ -0.67
RTN4-207ENST00000402434 HRCT1Q6UXD1 115 aa10.81□□□□□ -0.68
RTN4-207ENST00000402434 PPDPFLQ8WWR9 84 aa10.81□□□□□ -0.68
RTN4-207ENST00000402434 FAM218AQ96MZ4 157 aa10.79□□□□□ -0.68
RTN4-207ENST00000402434 LIMD2Q9BT23 127 aa10.78□□□□□ -0.68
RTN4-207ENST00000402434 F8WEM9 126 aa10.77□□□□□ -0.69
RTN4-207ENST00000402434 SNCGO76070 127 aa10.77□□□□□ -0.69
RTN4-207ENST00000402434 IGLV8-61A0A075B6I0 122 aa10.76□□□□□ -0.69
RTN4-207ENST00000402434 A0A0G2JQZ4 141 aa10.76□□□□□ -0.69
RTN4-207ENST00000402434 SMIM6P0DI80 62 aa10.76□□□□□ -0.69
RTN4-207ENST00000402434 CDIP1Q9H305 208 aa10.76□□□□□ -0.69
RTN4-207ENST00000402434 K7ERJ3 54 aa10.75□□□□□ -0.69
RTN4-207ENST00000402434 TRIAP1O43715 76 aa10.75□□□□□ -0.69
RTN4-207ENST00000402434 KRTAP13-3Q3SY46 172 aa10.75□□□□□ -0.69
RTN4-207ENST00000402434 OCIAD2Q56VL3 154 aa10.75□□□□□ -0.69
RTN4-207ENST00000402434 A0A1B0GX51 115 aa10.74□□□□□ -0.69
RTN4-207ENST00000402434 Q5XG85 94 aa10.74□□□□□ -0.69
RTN4-207ENST00000402434 Q6JHZ5 121 aa10.73□□□□□ -0.69
RTN4-207ENST00000402434 SNHG12Q9BXW3 62 aa10.72□□□□□ -0.69
RTN4-207ENST00000402434 PSMB2P49721 201 aa10.68□□□□□ -0.7
RTN4-207ENST00000402434 IGFL1Q6UW32 110 aa10.68□□□□□ -0.7
RTN4-207ENST00000402434 CLEC2BQ92478 149 aa10.68□□□□□ -0.7
RTN4-207ENST00000402434 GHRHP01286 108 aa10.67□□□□□ -0.7
RTN4-207ENST00000402434 COX6CP09669 75 aa10.66□□□□□ -0.7
RTN4-207ENST00000402434 NDUFV3P56181 108 aaKnown RBP10.65□□□□□ -0.7
RTN4-207ENST00000402434 H3BUT2 72 aa10.63□□□□□ -0.71
RTN4-207ENST00000402434 C1orf195Q5TG92 126 aa10.63□□□□□ -0.71
RTN4-207ENST00000402434 TCL1BO95988 128 aa10.62□□□□□ -0.71
RTN4-207ENST00000402434 TRBV7-7A0A0K0K1E9 115 aa10.61□□□□□ -0.71
RTN4-207ENST00000402434 M0R143 59 aa10.61□□□□□ -0.71
RTN4-207ENST00000402434 MUC2Q02817 5179 aa10.61□□□□□ -0.71
RTN4-207ENST00000402434 DNAL4O96015 105 aa10.6□□□□□ -0.71
RTN4-207ENST00000402434 FABP2P12104 132 aa10.6□□□□□ -0.71
RTN4-207ENST00000402434 H3BQ85 93 aa10.58□□□□□ -0.72
RTN4-207ENST00000402434 ASB16-AS1Q495Z4 193 aa10.58□□□□□ -0.72
RTN4-207ENST00000402434 ORMDL1Q9P0S3 153 aa10.58□□□□□ -0.72
RTN4-207ENST00000402434 TSTD3H0UI37 97 aa10.57□□□□□ -0.72
RTN4-207ENST00000402434 H3BMG7 143 aa10.57□□□□□ -0.72
RTN4-207ENST00000402434 Q6Q795 121 aa10.57□□□□□ -0.72
RTN4-207ENST00000402434 XP32Q5T750 250 aa10.56□□□□□ -0.72
RTN4-207ENST00000402434 TRACP01848 142 aa10.55□□□□□ -0.72
RTN4-207ENST00000402434 SCGB1C2P0DMR2 95 aa10.55□□□□□ -0.72
RTN4-207ENST00000402434 TMEM256-PLSCR3K7ERE1 68 aa10.54□□□□□ -0.72
RTN4-207ENST00000402434 LST1O00453 97 aa10.54□□□□□ -0.72
RTN4-207ENST00000402434 TEN1Q86WV5 123 aa10.53□□□□□ -0.72
RTN4-207ENST00000402434 C9orf92A6NGG3 77 aa10.49□□□□□ -0.73
RTN4-207ENST00000402434 SEC61BP60468 96 aaKnown RBP10.49□□□□□ -0.73
RTN4-207ENST00000402434 UBE2V1Q13404 147 aa10.49□□□□□ -0.73
RTN4-207ENST00000402434 MUC17Q685J3 4493 aa10.48□□□□□ -0.73
RTN4-207ENST00000402434 SS18L2Q9UHA2 77 aa10.47□□□□□ -0.73
RTN4-207ENST00000402434 A0A1W2PNM2 257 aa10.45□□□□□ -0.74
RTN4-207ENST00000402434 ANKRD29Q8N6D5 301 aa10.45□□□□□ -0.74
RTN4-207ENST00000402434 NAA38Q9BRA0 125 aaKnown RBP10.45□□□□□ -0.74
RTN4-207ENST00000402434 A0A087WSZ3 146 aa10.43□□□□□ -0.74
RTN4-207ENST00000402434 TRBV7-4A0A0J9YYF1 115 aa10.41□□□□□ -0.74
RTN4-207ENST00000402434 A0A0U1RQV1 116 aa10.41□□□□□ -0.74
RTN4-207ENST00000402434 A0A1B0GV72 72 aa10.41□□□□□ -0.74
RTN4-207ENST00000402434 BAALC-AS2P0C853 105 aa10.41□□□□□ -0.74
RTN4-207ENST00000402434 ATXN8Q156A1 80 aa10.41□□□□□ -0.74
RTN4-207ENST00000402434 BATFQ16520 125 aa10.41□□□□□ -0.74
RTN4-207ENST00000402434 KRTAP4-1Q9BYQ7 146 aa10.38□□□□□ -0.75
RTN4-207ENST00000402434 RBM3P98179 157 aaKnown RBP10.36□□□□□ -0.75
RTN4-207ENST00000402434 Q96NJ1 140 aa10.36□□□□□ -0.75
RTN4-207ENST00000402434 CCKP06307 115 aa10.36□□□□□ -0.75
RTN4-207ENST00000402434 LYRM7Q5U5X0 104 aa10.36□□□□□ -0.75
RTN4-207ENST00000402434 TRBV20-1A0A075B6N2 111 aa10.34□□□□□ -0.75
RTN4-207ENST00000402434 PCP4L1A6NKN8 68 aa10.34□□□□□ -0.75
RTN4-207ENST00000402434 PCOTHQ58A44 107 aa10.33□□□□□ -0.76
RTN4-207ENST00000402434 DSCR8Q96T75 97 aa10.33□□□□□ -0.76
RTN4-207ENST00000402434 C9orf118A6NHY6 69 aa10.31□□□□□ -0.76
RTN4-207ENST00000402434 RPL37P61927 97 aaKnown RBP10.31□□□□□ -0.76
RTN4-207ENST00000402434 TAX1BP3O14907 124 aa10.3□□□□□ -0.76
RTN4-207ENST00000402434 OBSCN-AS1Q96MR7 158 aa10.3□□□□□ -0.76
RTN4-207ENST00000402434 C9JAW5 83 aa10.28□□□□□ -0.76
RTN4-207ENST00000402434 JMJD7-PLA2G4BH0Y9G9 81 aa10.27□□□□□ -0.77
RTN4-207ENST00000402434 A0A1W2PPM0 123 aa10.26□□□□□ -0.77
RTN4-207ENST00000402434 LINC00472Q9H8W2 130 aa10.26□□□□□ -0.77
RTN4-207ENST00000402434 VPS25Q9BRG1 176 aa10.25□□□□□ -0.77
RTN4-207ENST00000402434 FAT4Q6V0I7 4981 aa10.25□□□□□ -0.77
RTN4-207ENST00000402434 IGKV4-1P06312 121 aa10.23□□□□□ -0.77
RTN4-207ENST00000402434 LCE2AQ5TA79 106 aaPredicted RBP10.23□□□□□ -0.77
RTN4-207ENST00000402434 Q75L30 129 aa10.23□□□□□ -0.77
RTN4-207ENST00000402434 LOC110117498A0A087WWA1 95 aa10.22□□□□□ -0.77
RTN4-207ENST00000402434 C21orf62-AS1Q17RA5 79 aa10.22□□□□□ -0.77
RTN4-207ENST00000402434 Q6ZQT0 140 aa10.22□□□□□ -0.77
RTN4-207ENST00000402434 SIGMAR1Q99720 223 aa10.22□□□□□ -0.77
RTN4-207ENST00000402434 PDE6GP18545 87 aa10.2□□□□□ -0.78
RTN4-207ENST00000402434 DEFB116Q30KQ4 102 aa10.19□□□□□ -0.78
RTN4-207ENST00000402434 A0A1B0GW54 56 aa10.18□□□□□ -0.78
RTN4-207ENST00000402434 H3BT86 120 aa10.17□□□□□ -0.78
RTN4-207ENST00000402434 C20orf166-AS1Q96NR2 134 aa10.17□□□□□ -0.78
RTN4-207ENST00000402434 C14orf132Q9NPU4 83 aa10.17□□□□□ -0.78
RTN4-207ENST00000402434 COL5A1-AS1Q5SY13 56 aa10.16□□□□□ -0.78
RTN4-207ENST00000402434 A8MUU9 505 aa10.15□□□□□ -0.78
RTN4-207ENST00000402434 DSCR10P59022 87 aa10.15□□□□□ -0.78
RTN4-207ENST00000402434 LINC00313P59037 77 aa10.14□□□□□ -0.79
RTN4-207ENST00000402434 ATP11AUNQ6ZP68 121 aa10.14□□□□□ -0.79
RTN4-207ENST00000402434 SPCS1Q9Y6A9 102 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms