RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 DEFB105AQ8NG35 78 aa10.2□□□□□ -0.78
TSPAN4-205ENST00000397406 LINC01600Q96MT4 127 aa10.2□□□□□ -0.78
TSPAN4-205ENST00000397406 SPRR4Q96PI1 79 aa10.19□□□□□ -0.78
TSPAN4-205ENST00000397406 F8W1H4 67 aa10.18□□□□□ -0.78
TSPAN4-205ENST00000397406 H3BQ85 93 aa10.18□□□□□ -0.78
TSPAN4-205ENST00000397406 TMEM256-PLSCR3K7ERE1 68 aa10.18□□□□□ -0.78
TSPAN4-205ENST00000397406 ANKRD29Q8N6D5 301 aa10.18□□□□□ -0.78
TSPAN4-205ENST00000397406 PPDPFLQ8WWR9 84 aa10.18□□□□□ -0.78
TSPAN4-205ENST00000397406 TEX49A0A1B0GTD5 131 aa10.17□□□□□ -0.78
TSPAN4-205ENST00000397406 J3QL48 77 aa10.17□□□□□ -0.78
TSPAN4-205ENST00000397406 GHRHP01286 108 aa10.17□□□□□ -0.78
TSPAN4-205ENST00000397406 SPRR1BP22528 89 aa10.17□□□□□ -0.78
TSPAN4-205ENST00000397406 SPINK6Q6UWN8 80 aa10.17□□□□□ -0.78
TSPAN4-205ENST00000397406 ZNF706Q9Y5V0 76 aaPredicted RBP10.17□□□□□ -0.78
TSPAN4-205ENST00000397406 GAGE2AQ6NT46 116 aa10.16□□□□□ -0.78
TSPAN4-205ENST00000397406 LINC00483Q53H64 154 aa10.16□□□□□ -0.78
TSPAN4-205ENST00000397406 SMIM29Q86T20 159 aa10.14□□□□□ -0.79
TSPAN4-205ENST00000397406 C3orf22Q8N5N4 141 aa10.13□□□□□ -0.79
TSPAN4-205ENST00000397406 HMCN2Q8NDA2 5059 aa10.12□□□□□ -0.79
TSPAN4-205ENST00000397406 KRTAP1-4P0C5Y4 121 aa10.1□□□□□ -0.79
TSPAN4-205ENST00000397406 NDUFV3P56181 108 aaKnown RBP10.1□□□□□ -0.79
TSPAN4-205ENST00000397406 ANAPC11Q9NYG5 84 aa10.1□□□□□ -0.79
TSPAN4-205ENST00000397406 OXTP01178 125 aa10.09□□□□□ -0.79
TSPAN4-205ENST00000397406 LAMTOR3Q9UHA4 124 aa10.08□□□□□ -0.8
TSPAN4-205ENST00000397406 MT1HL1P0DM35 61 aa10.07□□□□□ -0.8
TSPAN4-205ENST00000397406 ETDBQ3ZM63 59 aa10.07□□□□□ -0.8
TSPAN4-205ENST00000397406 OBSCN-AS1Q96MR7 158 aa10.07□□□□□ -0.8
TSPAN4-205ENST00000397406 TEN1Q86WV5 123 aa10.06□□□□□ -0.8
TSPAN4-205ENST00000397406 A0A1B0GV72 72 aa10.05□□□□□ -0.8
TSPAN4-205ENST00000397406 FAM229BQ4G0N7 80 aa10.05□□□□□ -0.8
TSPAN4-205ENST00000397406 JMJD7-PLA2G4BH0Y9G9 81 aa10.04□□□□□ -0.8
TSPAN4-205ENST00000397406 IGLV8-61A0A075B6I0 122 aa10.03□□□□□ -0.8
TSPAN4-205ENST00000397406 A0A087X002 238 aa10.03□□□□□ -0.8
TSPAN4-205ENST00000397406 F8WEM9 126 aa10.03□□□□□ -0.8
TSPAN4-205ENST00000397406 IGLV9-49A0A0B4J1Y8 123 aa10.01□□□□□ -0.81
TSPAN4-205ENST00000397406 RBM3P98179 157 aaKnown RBP10.01□□□□□ -0.81
TSPAN4-205ENST00000397406 KRTAP13-2Q52LG2 175 aa10□□□□□ -0.81
TSPAN4-205ENST00000397406 TNXBP22105 4242 aa9.99□□□□□ -0.81
TSPAN4-205ENST00000397406 TRBV7-4A0A0J9YYF1 115 aa9.99□□□□□ -0.81
TSPAN4-205ENST00000397406 CRYGAP11844 174 aa9.99□□□□□ -0.81
TSPAN4-205ENST00000397406 MOBPQ13875 183 aa9.99□□□□□ -0.81
TSPAN4-205ENST00000397406 C14orf132Q9NPU4 83 aa9.99□□□□□ -0.81
TSPAN4-205ENST00000397406 C9orf153Q5TBE3 101 aa9.98□□□□□ -0.81
TSPAN4-205ENST00000397406 Q8NBF4 154 aa9.98□□□□□ -0.81
TSPAN4-205ENST00000397406 LOC110117498A0A087WWA1 95 aa9.96□□□□□ -0.82
TSPAN4-205ENST00000397406 IGFL1Q6UW32 110 aa9.96□□□□□ -0.82
TSPAN4-205ENST00000397406 DSCR8Q96T75 97 aa9.96□□□□□ -0.82
TSPAN4-205ENST00000397406 A0A0G2JQZ4 141 aa9.95□□□□□ -0.82
TSPAN4-205ENST00000397406 Q6JHZ5 121 aa9.95□□□□□ -0.82
TSPAN4-205ENST00000397406 Q6ZQT0 140 aa9.94□□□□□ -0.82
TSPAN4-205ENST00000397406 PRR26Q8N8Z3 221 aa9.94□□□□□ -0.82
TSPAN4-205ENST00000397406 UBR4Q5T4S7 5183 aa9.93□□□□□ -0.82
TSPAN4-205ENST00000397406 SSBP3-AS1Q7Z2R9 100 aa9.92□□□□□ -0.82
TSPAN4-205ENST00000397406 PDE6GP18545 87 aa9.91□□□□□ -0.82
TSPAN4-205ENST00000397406 A0A1W2PNM2 257 aa9.9□□□□□ -0.83
TSPAN4-205ENST00000397406 TYMSOSQ8TAI1 123 aa9.9□□□□□ -0.83
TSPAN4-205ENST00000397406 CCKP06307 115 aa9.89□□□□□ -0.83
TSPAN4-205ENST00000397406 C21orf62-AS1Q17RA5 79 aa9.86□□□□□ -0.83
TSPAN4-205ENST00000397406 VPS25Q9BRG1 176 aa9.86□□□□□ -0.83
TSPAN4-205ENST00000397406 Q6Q795 121 aa9.85□□□□□ -0.83
TSPAN4-205ENST00000397406 KRTAP10-8P60410 259 aa9.84□□□□□ -0.83
TSPAN4-205ENST00000397406 CD164Q04900 197 aa9.82□□□□□ -0.84
TSPAN4-205ENST00000397406 HRCT1Q6UXD1 115 aa9.82□□□□□ -0.84
TSPAN4-205ENST00000397406 TRBV7-7A0A0K0K1E9 115 aa9.8□□□□□ -0.84
TSPAN4-205ENST00000397406 A0A1B0GW54 56 aa9.79□□□□□ -0.84
TSPAN4-205ENST00000397406 J3QR89 54 aa9.79□□□□□ -0.84
TSPAN4-205ENST00000397406 LINC00304Q8N9R0 145 aa9.79□□□□□ -0.84
TSPAN4-205ENST00000397406 LRP2P98164 4655 aa9.79□□□□□ -0.84
TSPAN4-205ENST00000397406 FAM240AA0A1B0GVK7 77 aa9.78□□□□□ -0.84
TSPAN4-205ENST00000397406 A0A087WSZ3 146 aa9.76□□□□□ -0.85
TSPAN4-205ENST00000397406 K7ERU9 68 aa9.75□□□□□ -0.85
TSPAN4-205ENST00000397406 ACYP1P07311 99 aa9.75□□□□□ -0.85
TSPAN4-205ENST00000397406 SPAG11AQ6PDA7 123 aa9.75□□□□□ -0.85
TSPAN4-205ENST00000397406 C4orf48Q5BLP8 95 aa9.74□□□□□ -0.85
TSPAN4-205ENST00000397406 LINC00846Q9NV44 126 aa9.74□□□□□ -0.85
TSPAN4-205ENST00000397406 SPINK1P00995 79 aa9.73□□□□□ -0.85
TSPAN4-205ENST00000397406 RPS29P62273 56 aaKnown RBP9.71□□□□□ -0.86
TSPAN4-205ENST00000397406 Q5XG85 94 aa9.7□□□□□ -0.86
TSPAN4-205ENST00000397406 SS18L2Q9UHA2 77 aa9.69□□□□□ -0.86
TSPAN4-205ENST00000397406 Q6ZVQ6 151 aa9.67□□□□□ -0.86
TSPAN4-205ENST00000397406 LIMD2Q9BT23 127 aa9.67□□□□□ -0.86
TSPAN4-205ENST00000397406 ASB16-AS1Q495Z4 193 aa9.66□□□□□ -0.86
TSPAN4-205ENST00000397406 UBL5Q9BZL1 73 aa9.66□□□□□ -0.86
TSPAN4-205ENST00000397406 NREPQ16612 68 aa9.65□□□□□ -0.86
TSPAN4-205ENST00000397406 Q96NJ1 140 aa9.65□□□□□ -0.87
TSPAN4-205ENST00000397406 CDIP1Q9H305 208 aa9.65□□□□□ -0.87
TSPAN4-205ENST00000397406 RNF213Q63HN8 5207 aa9.64□□□□□ -0.87
TSPAN4-205ENST00000397406 LINC00472Q9H8W2 130 aa9.64□□□□□ -0.87
TSPAN4-205ENST00000397406 LPAP08519 4548 aa9.62□□□□□ -0.87
TSPAN4-205ENST00000397406 C1orf195Q5TG92 126 aa9.6□□□□□ -0.87
TSPAN4-205ENST00000397406 DEFB116Q30KQ4 102 aa9.58□□□□□ -0.88
TSPAN4-205ENST00000397406 LINC00643Q86TS7 51 aa9.57□□□□□ -0.88
TSPAN4-205ENST00000397406 BPY2O14599 106 aa9.55□□□□□ -0.88
TSPAN4-205ENST00000397406 SIGMAR1Q99720 223 aa9.55□□□□□ -0.88
TSPAN4-205ENST00000397406 J3KT08 172 aa9.54□□□□□ -0.88
TSPAN4-205ENST00000397406 IGKV4-1P06312 121 aa9.54□□□□□ -0.88
TSPAN4-205ENST00000397406 RETNLBQ9BQ08 111 aa9.53□□□□□ -0.88
TSPAN4-205ENST00000397406 DSCR10P59022 87 aa9.52□□□□□ -0.89
TSPAN4-205ENST00000397406 CXCL6P80162 114 aa9.52□□□□□ -0.89
TSPAN4-205ENST00000397406 ATP5EP2Q5VTU8 51 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms