RNA–Protein interactions for RNA: ENST00000396872.7

SLC29A4-202, Transcript of solute carrier family 29 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC29A4, Length 5,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC29A4-202ENST00000396872 FRYQ5TBA9 3013 aa11.68□□□□□ -0.54
SLC29A4-202ENST00000396872 CELSR3Q9NYQ7 3312 aa11.68□□□□□ -0.54
SLC29A4-202ENST00000396872 KRTAP1-1Q07627 177 aa11.67□□□□□ -0.54
SLC29A4-202ENST00000396872 VCANP13611 3396 aa11.66□□□□□ -0.54
SLC29A4-202ENST00000396872 SZT2Q5T011 3432 aa11.65□□□□□ -0.54
SLC29A4-202ENST00000396872 A0A0D9SG42 100 aa11.64□□□□□ -0.55
SLC29A4-202ENST00000396872 CFAP46Q8IYW2 2715 aa11.63□□□□□ -0.55
SLC29A4-202ENST00000396872 GCN1Q92616 2671 aaKnown RBP11.63□□□□□ -0.55
SLC29A4-202ENST00000396872 Q5VV11 94 aa11.61□□□□□ -0.55
SLC29A4-202ENST00000396872 PRAC1Q96KF2 57 aa11.6□□□□□ -0.55
SLC29A4-202ENST00000396872 MMP24-AS1A0A0U1RRL7 71 aa11.6□□□□□ -0.55
SLC29A4-202ENST00000396872 HRES1P13985 223 aa11.6□□□□□ -0.55
SLC29A4-202ENST00000396872 LAMA1P25391 3075 aa11.59□□□□□ -0.55
SLC29A4-202ENST00000396872 SMR3BP02814 79 aaPredicted RBP11.58□□□□□ -0.56
SLC29A4-202ENST00000396872 LINC01558Q9Y6Z2 57 aa11.57□□□□□ -0.56
SLC29A4-202ENST00000396872 DSPP15924 2871 aaKnown RBP11.57□□□□□ -0.56
SLC29A4-202ENST00000396872 UNC79Q9P2D8 2635 aa11.56□□□□□ -0.56
SLC29A4-202ENST00000396872 NBEAQ8NFP9 2946 aa11.55□□□□□ -0.56
SLC29A4-202ENST00000396872 SPRR1AP35321 89 aa11.54□□□□□ -0.56
SLC29A4-202ENST00000396872 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.53□□□□□ -0.56
SLC29A4-202ENST00000396872 WWC2-AS2Q96NR7 200 aa11.53□□□□□ -0.56
SLC29A4-202ENST00000396872 NBEAL2Q6ZNJ1 2754 aa11.51□□□□□ -0.57
SLC29A4-202ENST00000396872 SPINK7P58062 85 aa11.5□□□□□ -0.57
SLC29A4-202ENST00000396872 HELZ2Q9BYK8 2649 aaKnown RBP11.48□□□□□ -0.57
SLC29A4-202ENST00000396872 LINC01554Q52M75 96 aa11.48□□□□□ -0.57
SLC29A4-202ENST00000396872 ZNF292O60281 2723 aa11.46□□□□□ -0.57
SLC29A4-202ENST00000396872 LINC00472Q9H8W2 130 aa11.46□□□□□ -0.58
SLC29A4-202ENST00000396872 KALRNO60229 2985 aa11.44□□□□□ -0.58
SLC29A4-202ENST00000396872 NOTCH1P46531 2555 aa11.44□□□□□ -0.58
SLC29A4-202ENST00000396872 NBEAL1Q6ZS30 2694 aa11.43□□□□□ -0.58
SLC29A4-202ENST00000396872 TEX15Q9BXT5 2789 aa11.43□□□□□ -0.58
SLC29A4-202ENST00000396872 A0A1B0GU33 70 aa11.42□□□□□ -0.58
SLC29A4-202ENST00000396872 SPEGQ15772 3267 aa11.41□□□□□ -0.58
SLC29A4-202ENST00000396872 TNP2Q05952 138 aa11.36□□□□□ -0.59
SLC29A4-202ENST00000396872 CSAG1Q6PB30 78 aa11.35□□□□□ -0.59
SLC29A4-202ENST00000396872 KRTAP26-1Q6PEX3 210 aa11.35□□□□□ -0.59
SLC29A4-202ENST00000396872 H3BS24 57 aa11.35□□□□□ -0.59
SLC29A4-202ENST00000396872 Q5W150 140 aa11.33□□□□□ -0.6
SLC29A4-202ENST00000396872 SPRR1BP22528 89 aa11.32□□□□□ -0.6
SLC29A4-202ENST00000396872 STAB1Q9NY15 2570 aa11.3□□□□□ -0.6
SLC29A4-202ENST00000396872 COX6B2Q6YFQ2 88 aa11.29□□□□□ -0.6
SLC29A4-202ENST00000396872 FRYLO94915 3013 aa11.28□□□□□ -0.6
SLC29A4-202ENST00000396872 TEP1Q99973 2627 aaKnown RBP11.28□□□□□ -0.6
SLC29A4-202ENST00000396872 COL6A5A8TX70 2615 aa11.25□□□□□ -0.61
SLC29A4-202ENST00000396872 KRTAP1-5Q9BYS1 174 aa11.25□□□□□ -0.61
SLC29A4-202ENST00000396872 ZCCHC13Q8WW36 166 aaKnown RBP11.22□□□□□ -0.61
SLC29A4-202ENST00000396872 PLAC8Q9NZF1 115 aa11.2□□□□□ -0.62
SLC29A4-202ENST00000396872 DMXL2Q8TDJ6 3036 aa11.2□□□□□ -0.62
SLC29A4-202ENST00000396872 KRTAP4-16G5E9R7 235 aaPredicted RBP11.19□□□□□ -0.62
SLC29A4-202ENST00000396872 UBR5O95071 2799 aaPredicted RBP11.18□□□□□ -0.62
SLC29A4-202ENST00000396872 ADGRG4Q8IZF6 3080 aa11.18□□□□□ -0.62
SLC29A4-202ENST00000396872 EYSQ5T1H1 3165 aa11.18□□□□□ -0.62
SLC29A4-202ENST00000396872 BOD1L1Q8NFC6 3051 aa11.17□□□□□ -0.62
SLC29A4-202ENST00000396872 KRTAP29-1A8MX34 341 aaPredicted RBP11.17□□□□□ -0.62
SLC29A4-202ENST00000396872 SETXQ7Z333 2677 aaKnown RBP11.16□□□□□ -0.62
SLC29A4-202ENST00000396872 J3QL48 77 aa11.16□□□□□ -0.62
SLC29A4-202ENST00000396872 ASH1LQ9NR48 2969 aaKnown RBP11.15□□□□□ -0.62
SLC29A4-202ENST00000396872 LUZP6Q538Z0 58 aa11.13□□□□□ -0.63
SLC29A4-202ENST00000396872 COL6A3P12111 3177 aa11.11□□□□□ -0.63
SLC29A4-202ENST00000396872 SPTBN5Q9NRC6 3674 aaKnown RBP11.11□□□□□ -0.63
SLC29A4-202ENST00000396872 DMAC1Q96GE9 116 aa11.1□□□□□ -0.63
SLC29A4-202ENST00000396872 ATMQ13315 3056 aa11.1□□□□□ -0.63
SLC29A4-202ENST00000396872 FLG2Q5D862 2391 aaPredicted RBP11.1□□□□□ -0.63
SLC29A4-202ENST00000396872 Q6ZR54 194 aa11.09□□□□□ -0.63
SLC29A4-202ENST00000396872 MYO15AQ9UKN7 3530 aa11.08□□□□□ -0.64
SLC29A4-202ENST00000396872 BAHCC1Q9P281 2608 aa11.08□□□□□ -0.64
SLC29A4-202ENST00000396872 TACC2O95359 2948 aa11.08□□□□□ -0.64
SLC29A4-202ENST00000396872 ITPR1Q14643 2758 aa11.07□□□□□ -0.64
SLC29A4-202ENST00000396872 LRBAP50851 2863 aa11.07□□□□□ -0.64
SLC29A4-202ENST00000396872 PANO1I0J062 215 aa11.05□□□□□ -0.64
SLC29A4-202ENST00000396872 DMBT1Q9UGM3 2413 aaPredicted RBP11.02□□□□□ -0.64
SLC29A4-202ENST00000396872 REV3LO60673 3130 aa11.02□□□□□ -0.64
SLC29A4-202ENST00000396872 A0A087X002 238 aa11.01□□□□□ -0.65
SLC29A4-202ENST00000396872 Q6ZSA8 131 aa11.01□□□□□ -0.65
SLC29A4-202ENST00000396872 NOTCH2NLQ7Z3S9 236 aa11.01□□□□□ -0.65
SLC29A4-202ENST00000396872 A8MU10 97 aa11□□□□□ -0.65
SLC29A4-202ENST00000396872 CAMK2N1Q7Z7J9 78 aa10.98□□□□□ -0.65
SLC29A4-202ENST00000396872 CFAP47Q6ZTR5 3102 aa10.98□□□□□ -0.65
SLC29A4-202ENST00000396872 LINC00483Q53H64 154 aa10.97□□□□□ -0.65
SLC29A4-202ENST00000396872 IGSF10Q6WRI0 2623 aa10.97□□□□□ -0.65
SLC29A4-202ENST00000396872 STAB2Q8WWQ8 2551 aa10.97□□□□□ -0.65
SLC29A4-202ENST00000396872 S4R3F8 94 aa10.96□□□□□ -0.66
SLC29A4-202ENST00000396872 COL12A1Q99715 3063 aa10.95□□□□□ -0.66
SLC29A4-202ENST00000396872 A6NN06 94 aa10.93□□□□□ -0.66
SLC29A4-202ENST00000396872 LCE6AA0A183 80 aa10.92□□□□□ -0.66
SLC29A4-202ENST00000396872 KRTAP11-1Q8IUC1 163 aa10.91□□□□□ -0.66
SLC29A4-202ENST00000396872 NSD1Q96L73 2696 aaPredicted RBP10.91□□□□□ -0.66
SLC29A4-202ENST00000396872 SPATA8Q6RVD6 105 aa10.91□□□□□ -0.66
SLC29A4-202ENST00000396872 RPL37P61927 97 aaKnown RBP10.9□□□□□ -0.66
SLC29A4-202ENST00000396872 H1FX-AS1Q4G0G2 97 aa10.9□□□□□ -0.66
SLC29A4-202ENST00000396872 ROMO1P60602 79 aa10.89□□□□□ -0.67
SLC29A4-202ENST00000396872 USP34Q70CQ2 3546 aa10.88□□□□□ -0.67
SLC29A4-202ENST00000396872 KRTAP7-1Q8IUC3 87 aa10.88□□□□□ -0.67
SLC29A4-202ENST00000396872 FLNCQ14315 2725 aa10.86□□□□□ -0.67
SLC29A4-202ENST00000396872 ADM2Q7Z4H4 148 aa10.85□□□□□ -0.67
SLC29A4-202ENST00000396872 APCP25054 2843 aa10.84□□□□□ -0.67
SLC29A4-202ENST00000396872 KRTAP10-2P60368 255 aa10.84□□□□□ -0.67
SLC29A4-202ENST00000396872 ZZEF1O43149 2961 aa10.83□□□□□ -0.68
SLC29A4-202ENST00000396872 UTP20O75691 2785 aaKnown RBP10.82□□□□□ -0.68
SLC29A4-202ENST00000396872 KRTAP10-1P60331 282 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms