RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 Q6JHZ5 121 aa9.37□□□□□ -0.91
SCAF11-204ENST00000395454 KIAA1109Q2LD37 5005 aa9.36□□□□□ -0.91
SCAF11-204ENST00000395454 PLAC8Q9NZF1 115 aa9.36□□□□□ -0.91
SCAF11-204ENST00000395454 ST20-AS1Q8NBB2 130 aa9.35□□□□□ -0.91
SCAF11-204ENST00000395454 HSPG2P98160 4391 aa9.35□□□□□ -0.91
SCAF11-204ENST00000395454 FAM19A1Q7Z5A9 133 aa9.35□□□□□ -0.91
SCAF11-204ENST00000395454 BIRC6Q9NR09 4857 aa9.33□□□□□ -0.92
SCAF11-204ENST00000395454 CDK2AP2O75956 126 aa9.33□□□□□ -0.92
SCAF11-204ENST00000395454 PRLHP81277 87 aa9.33□□□□□ -0.92
SCAF11-204ENST00000395454 KRTAP13-1Q8IUC0 172 aa9.33□□□□□ -0.92
SCAF11-204ENST00000395454 RYR1P21817 5038 aa9.33□□□□□ -0.92
SCAF11-204ENST00000395454 ATP5EP2Q5VTU8 51 aa9.32□□□□□ -0.92
SCAF11-204ENST00000395454 DEFB105AQ8NG35 78 aa9.32□□□□□ -0.92
SCAF11-204ENST00000395454 FAT1Q14517 4588 aa9.31□□□□□ -0.92
SCAF11-204ENST00000395454 BCE1O60756 84 aa9.31□□□□□ -0.92
SCAF11-204ENST00000395454 SMIM29Q86T20 159 aa9.31□□□□□ -0.92
SCAF11-204ENST00000395454 VPS13BQ7Z7G8 4022 aa9.3□□□□□ -0.92
SCAF11-204ENST00000395454 UBL5Q9BZL1 73 aa9.3□□□□□ -0.92
SCAF11-204ENST00000395454 SMR3BP02814 79 aaPredicted RBP9.29□□□□□ -0.92
SCAF11-204ENST00000395454 A0A1B0GW54 56 aa9.29□□□□□ -0.92
SCAF11-204ENST00000395454 SPRR1BP22528 89 aa9.29□□□□□ -0.92
SCAF11-204ENST00000395454 C3orf22Q8N5N4 141 aa9.28□□□□□ -0.92
SCAF11-204ENST00000395454 IGLV8-61A0A075B6I0 122 aa9.27□□□□□ -0.93
SCAF11-204ENST00000395454 HIGD2AQ9BW72 106 aa9.27□□□□□ -0.93
SCAF11-204ENST00000395454 Q6ZVQ6 151 aa9.26□□□□□ -0.93
SCAF11-204ENST00000395454 UBE2AP49459 152 aa9.24□□□□□ -0.93
SCAF11-204ENST00000395454 HIST1H4AP62805 103 aaKnown RBP9.23□□□□□ -0.93
SCAF11-204ENST00000395454 C1orf137Q5JT78 98 aa9.23□□□□□ -0.93
SCAF11-204ENST00000395454 IGKV3D-7A0A0C4DH55 119 aa9.23□□□□□ -0.93
SCAF11-204ENST00000395454 A0A1W2PNM2 257 aa9.22□□□□□ -0.93
SCAF11-204ENST00000395454 Q8NBF4 154 aa9.22□□□□□ -0.93
SCAF11-204ENST00000395454 SPRR4Q96PI1 79 aa9.22□□□□□ -0.93
SCAF11-204ENST00000395454 CXCL6P80162 114 aa9.21□□□□□ -0.93
SCAF11-204ENST00000395454 SRRM2Q9UQ35 2752 aaKnown RBP9.21□□□□□ -0.94
SCAF11-204ENST00000395454 PSORS1C2Q9UIG4 136 aa9.2□□□□□ -0.94
SCAF11-204ENST00000395454 FAM236AA0A1B0GUQ0 79 aa9.19□□□□□ -0.94
SCAF11-204ENST00000395454 FAM236BA0A1B0GV22 79 aa9.19□□□□□ -0.94
SCAF11-204ENST00000395454 F8WEM9 126 aa9.19□□□□□ -0.94
SCAF11-204ENST00000395454 FAM229AH3BQW9 127 aa9.18□□□□□ -0.94
SCAF11-204ENST00000395454 RPL37AP61513 92 aaKnown RBP9.18□□□□□ -0.94
SCAF11-204ENST00000395454 ANAPC13Q9BS18 74 aa9.18□□□□□ -0.94
SCAF11-204ENST00000395454 CRYGAP11844 174 aa9.17□□□□□ -0.94
SCAF11-204ENST00000395454 Q5VSD8 79 aa9.17□□□□□ -0.94
SCAF11-204ENST00000395454 LINC00483Q53H64 154 aa9.16□□□□□ -0.94
SCAF11-204ENST00000395454 IGFL1Q6UW32 110 aa9.16□□□□□ -0.94
SCAF11-204ENST00000395454 Q8N1X5 172 aa9.15□□□□□ -0.95
SCAF11-204ENST00000395454 KRTAP17-1Q9BYP8 105 aa9.14□□□□□ -0.95
SCAF11-204ENST00000395454 PLA2G1BP04054 148 aaKnown RBP9.13□□□□□ -0.95
SCAF11-204ENST00000395454 A0A087WVE0 104 aa9.13□□□□□ -0.95
SCAF11-204ENST00000395454 ZNF861PO60384 105 aa9.13□□□□□ -0.95
SCAF11-204ENST00000395454 HERC2O95714 4834 aa9.12□□□□□ -0.95
SCAF11-204ENST00000395454 NREPQ16612 68 aa9.12□□□□□ -0.95
SCAF11-204ENST00000395454 ZNF706Q9Y5V0 76 aaPredicted RBP9.11□□□□□ -0.95
SCAF11-204ENST00000395454 ATOX1O00244 68 aa9.1□□□□□ -0.95
SCAF11-204ENST00000395454 IGLV7-43P04211 117 aa9.09□□□□□ -0.95
SCAF11-204ENST00000395454 KRTAP10-4P60372 401 aaPredicted RBP9.09□□□□□ -0.95
SCAF11-204ENST00000395454 A0A0G2JQZ4 141 aa9.05□□□□□ -0.96
SCAF11-204ENST00000395454 BPY2O14599 106 aa9.05□□□□□ -0.96
SCAF11-204ENST00000395454 KRTAP4-5Q9BYR2 181 aa9.03□□□□□ -0.96
SCAF11-204ENST00000395454 IGKV4-1P06312 121 aa9.03□□□□□ -0.96
SCAF11-204ENST00000395454 A0A087WSZ3 146 aa9.01□□□□□ -0.97
SCAF11-204ENST00000395454 SPINK6Q6UWN8 80 aa9.01□□□□□ -0.97
SCAF11-204ENST00000395454 CCDC179H3BU77 68 aa9□□□□□ -0.97
SCAF11-204ENST00000395454 UQCRQO14949 82 aa8.99□□□□□ -0.97
SCAF11-204ENST00000395454 ABCA13Q86UQ4 5058 aa8.99□□□□□ -0.97
SCAF11-204ENST00000395454 COX7CP15954 63 aa8.99□□□□□ -0.97
SCAF11-204ENST00000395454 DSCR10P59022 87 aa8.99□□□□□ -0.97
SCAF11-204ENST00000395454 SERP2Q8N6R1 65 aa8.99□□□□□ -0.97
SCAF11-204ENST00000395454 MYCBP2O75592 4640 aa8.98□□□□□ -0.97
SCAF11-204ENST00000395454 PKHD1L1Q86WI1 4243 aa8.98□□□□□ -0.97
SCAF11-204ENST00000395454 Q8N9L7 120 aa8.97□□□□□ -0.97
SCAF11-204ENST00000395454 FLG2Q5D862 2391 aaPredicted RBP8.97□□□□□ -0.97
SCAF11-204ENST00000395454 IGLV9-49A0A0B4J1Y8 123 aa8.96□□□□□ -0.97
SCAF11-204ENST00000395454 C9orf153Q5TBE3 101 aa8.95□□□□□ -0.98
SCAF11-204ENST00000395454 LINC00472Q9H8W2 130 aa8.95□□□□□ -0.98
SCAF11-204ENST00000395454 LRP1Q07954 4544 aaKnown RBP8.94□□□□□ -0.98
SCAF11-204ENST00000395454 SMIM20Q8N5G0 67 aa8.94□□□□□ -0.98
SCAF11-204ENST00000395454 MOBPQ13875 183 aa8.93□□□□□ -0.98
SCAF11-204ENST00000395454 ANAPC11Q9NYG5 84 aa8.92□□□□□ -0.98
SCAF11-204ENST00000395454 TRAV7A0A075B6U4 112 aa8.91□□□□□ -0.98
SCAF11-204ENST00000395454 K7EQZ3 153 aa8.91□□□□□ -0.98
SCAF11-204ENST00000395454 FAT3Q8TDW7 4589 aa8.89□□□□□ -0.99
SCAF11-204ENST00000395454 PCLOQ9Y6V0 5065 aa8.89□□□□□ -0.99
SCAF11-204ENST00000395454 FAM229BQ4G0N7 80 aa8.89□□□□□ -0.99
SCAF11-204ENST00000395454 KRTAP1-4P0C5Y4 121 aa8.88□□□□□ -0.99
SCAF11-204ENST00000395454 CD164Q04900 197 aa8.88□□□□□ -0.99
SCAF11-204ENST00000395454 SS18L2Q9UHA2 77 aa8.88□□□□□ -0.99
SCAF11-204ENST00000395454 J3KT08 172 aa8.87□□□□□ -0.99
SCAF11-204ENST00000395454 SSBP3-AS1Q7Z2R9 100 aa8.87□□□□□ -0.99
SCAF11-204ENST00000395454 Q96NJ1 140 aa8.87□□□□□ -0.99
SCAF11-204ENST00000395454 A8MWP4 228 aa8.86□□□□□ -0.99
SCAF11-204ENST00000395454 OCR1Q9BZK8 76 aa8.86□□□□□ -0.99
SCAF11-204ENST00000395454 DEFB116Q30KQ4 102 aa8.84□□□□□ -0.99
SCAF11-204ENST00000395454 PRR15Q8IV56 129 aa8.84□□□□□ -1
SCAF11-204ENST00000395454 HCG22E2RYF7 251 aa8.83□□□□□ -1
SCAF11-204ENST00000395454 A0A087X002 238 aa8.82□□□□□ -1
SCAF11-204ENST00000395454 KRTAP13-2Q52LG2 175 aa8.81□□□□□ -1
SCAF11-204ENST00000395454 PRR26Q8N8Z3 221 aa8.81□□□□□ -1
SCAF11-204ENST00000395454 TNXBP22105 4242 aa8.8□□□□□ -1
SCAF11-204ENST00000395454 KRTAP29-1A8MX34 341 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms