RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 NOTCH1P46531 2555 aa10.6□□□□□ -0.71
SIN3A-203ENST00000394949 SPINK7P58062 85 aa10.59□□□□□ -0.71
SIN3A-203ENST00000394949 UNC79Q9P2D8 2635 aa10.58□□□□□ -0.72
SIN3A-203ENST00000394949 PRAC1Q96KF2 57 aa10.58□□□□□ -0.72
SIN3A-203ENST00000394949 A0A0D9SG42 100 aa10.57□□□□□ -0.72
SIN3A-203ENST00000394949 CHD9Q3L8U1 2897 aa10.57□□□□□ -0.72
SIN3A-203ENST00000394949 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.56□□□□□ -0.72
SIN3A-203ENST00000394949 FLG2Q5D862 2391 aaPredicted RBP10.56□□□□□ -0.72
SIN3A-203ENST00000394949 C5orf42Q9H799 3197 aa10.55□□□□□ -0.72
SIN3A-203ENST00000394949 KRTAP26-1Q6PEX3 210 aa10.53□□□□□ -0.72
SIN3A-203ENST00000394949 ZCCHC13Q8WW36 166 aaKnown RBP10.51□□□□□ -0.73
SIN3A-203ENST00000394949 Q5W150 140 aa10.51□□□□□ -0.73
SIN3A-203ENST00000394949 PCNTO95613 3336 aa10.5□□□□□ -0.73
SIN3A-203ENST00000394949 MGAQ8IWI9 3026 aa10.5□□□□□ -0.73
SIN3A-203ENST00000394949 ASB16-AS1Q495Z4 193 aa10.5□□□□□ -0.73
SIN3A-203ENST00000394949 H3BS24 57 aa10.49□□□□□ -0.73
SIN3A-203ENST00000394949 A0A0C4DFX4 3053 aa10.48□□□□□ -0.73
SIN3A-203ENST00000394949 PLAC8Q9NZF1 115 aa10.48□□□□□ -0.73
SIN3A-203ENST00000394949 DMAC1Q96GE9 116 aa10.47□□□□□ -0.73
SIN3A-203ENST00000394949 CSAG1Q6PB30 78 aa10.46□□□□□ -0.73
SIN3A-203ENST00000394949 KRTAP29-1A8MX34 341 aaPredicted RBP10.45□□□□□ -0.74
SIN3A-203ENST00000394949 LUZP6Q538Z0 58 aa10.45□□□□□ -0.74
SIN3A-203ENST00000394949 GCN1Q92616 2671 aaKnown RBP10.44□□□□□ -0.74
SIN3A-203ENST00000394949 Q6ZR54 194 aa10.44□□□□□ -0.74
SIN3A-203ENST00000394949 RANBP2P49792 3224 aaKnown RBP10.44□□□□□ -0.74
SIN3A-203ENST00000394949 KRTAP4-16G5E9R7 235 aaPredicted RBP10.43□□□□□ -0.74
SIN3A-203ENST00000394949 Q6ZSA8 131 aa10.41□□□□□ -0.74
SIN3A-203ENST00000394949 UTRNP46939 3433 aa10.41□□□□□ -0.74
SIN3A-203ENST00000394949 UBR5O95071 2799 aaPredicted RBP10.39□□□□□ -0.75
SIN3A-203ENST00000394949 CFAP54Q96N23 3096 aa10.36□□□□□ -0.75
SIN3A-203ENST00000394949 LCE6AA0A183 80 aa10.35□□□□□ -0.75
SIN3A-203ENST00000394949 TRANK1O15050 2925 aa10.34□□□□□ -0.75
SIN3A-203ENST00000394949 MAP1AP78559 2803 aaPredicted RBP10.33□□□□□ -0.76
SIN3A-203ENST00000394949 LINC00483Q53H64 154 aa10.32□□□□□ -0.76
SIN3A-203ENST00000394949 DSPP15924 2871 aaKnown RBP10.3□□□□□ -0.76
SIN3A-203ENST00000394949 HTTP42858 3142 aa10.29□□□□□ -0.76
SIN3A-203ENST00000394949 IGSF10Q6WRI0 2623 aa10.29□□□□□ -0.76
SIN3A-203ENST00000394949 KRTAP1-5Q9BYS1 174 aa10.28□□□□□ -0.76
SIN3A-203ENST00000394949 STAB2Q8WWQ8 2551 aa10.28□□□□□ -0.76
SIN3A-203ENST00000394949 BAHCC1Q9P281 2608 aa10.27□□□□□ -0.77
SIN3A-203ENST00000394949 NSD1Q96L73 2696 aaPredicted RBP10.26□□□□□ -0.77
SIN3A-203ENST00000394949 A6NN06 94 aa10.24□□□□□ -0.77
SIN3A-203ENST00000394949 SPATA8Q6RVD6 105 aa10.23□□□□□ -0.77
SIN3A-203ENST00000394949 WDFY4Q6ZS81 3184 aa10.23□□□□□ -0.77
SIN3A-203ENST00000394949 NBEAL2Q6ZNJ1 2754 aa10.22□□□□□ -0.77
SIN3A-203ENST00000394949 DMBT1Q9UGM3 2413 aaPredicted RBP10.22□□□□□ -0.77
SIN3A-203ENST00000394949 RPL37P61927 97 aaKnown RBP10.21□□□□□ -0.78
SIN3A-203ENST00000394949 ROMO1P60602 79 aa10.2□□□□□ -0.78
SIN3A-203ENST00000394949 S4R3F8 94 aa10.18□□□□□ -0.78
SIN3A-203ENST00000394949 H1FX-AS1Q4G0G2 97 aa10.18□□□□□ -0.78
SIN3A-203ENST00000394949 CAMK2N1Q7Z7J9 78 aa10.15□□□□□ -0.78
SIN3A-203ENST00000394949 A0A0A0MQY5 61 aa10.12□□□□□ -0.79
SIN3A-203ENST00000394949 KRTAP10-1P60331 282 aa10.1□□□□□ -0.79
SIN3A-203ENST00000394949 M0R2T5 61 aa10.08□□□□□ -0.8
SIN3A-203ENST00000394949 LAMA3Q16787 3333 aa10.08□□□□□ -0.8
SIN3A-203ENST00000394949 TRIOO75962 3097 aa10.06□□□□□ -0.8
SIN3A-203ENST00000394949 SEC61BP60468 96 aaKnown RBP10.06□□□□□ -0.8
SIN3A-203ENST00000394949 KRTAP10-2P60368 255 aa10.06□□□□□ -0.8
SIN3A-203ENST00000394949 ITPR2Q14571 2701 aa10.05□□□□□ -0.8
SIN3A-203ENST00000394949 LAMA2P24043 3122 aaKnown RBP10.05□□□□□ -0.8
SIN3A-203ENST00000394949 Q5VSD8 79 aa10.03□□□□□ -0.8
SIN3A-203ENST00000394949 ITPR1Q14643 2758 aa10.03□□□□□ -0.8
SIN3A-203ENST00000394949 A0A087X002 238 aa10□□□□□ -0.81
SIN3A-203ENST00000394949 NOTCH2NLQ7Z3S9 236 aa10□□□□□ -0.81
SIN3A-203ENST00000394949 PANO1I0J062 215 aa10□□□□□ -0.81
SIN3A-203ENST00000394949 PRUNE2Q8WUY3 3088 aa10□□□□□ -0.81
SIN3A-203ENST00000394949 FRYQ5TBA9 3013 aa9.99□□□□□ -0.81
SIN3A-203ENST00000394949 FLNCQ14315 2725 aa9.99□□□□□ -0.81
SIN3A-203ENST00000394949 R4GN34 69 aa9.97□□□□□ -0.81
SIN3A-203ENST00000394949 KRTAP7-1Q8IUC3 87 aa9.96□□□□□ -0.81
SIN3A-203ENST00000394949 KRTAP25-1Q3LHN0 102 aa9.96□□□□□ -0.82
SIN3A-203ENST00000394949 MKI67P46013 3256 aaKnown RBP9.95□□□□□ -0.82
SIN3A-203ENST00000394949 A8MU10 97 aa9.91□□□□□ -0.82
SIN3A-203ENST00000394949 KRTAP11-1Q8IUC1 163 aa9.9□□□□□ -0.83
SIN3A-203ENST00000394949 VPS13AQ96RL7 3174 aa9.89□□□□□ -0.83
SIN3A-203ENST00000394949 TACC2O95359 2948 aa9.89□□□□□ -0.83
SIN3A-203ENST00000394949 KRTAP13-1Q8IUC0 172 aa9.86□□□□□ -0.83
SIN3A-203ENST00000394949 HIVEP1P15822 2718 aa9.86□□□□□ -0.83
SIN3A-203ENST00000394949 ADM2Q7Z4H4 148 aa9.84□□□□□ -0.83
SIN3A-203ENST00000394949 RPS29P62273 56 aaKnown RBP9.83□□□□□ -0.84
SIN3A-203ENST00000394949 BRCA2P51587 3418 aa9.8□□□□□ -0.84
SIN3A-203ENST00000394949 TENM4Q6N022 2769 aa9.79□□□□□ -0.84
SIN3A-203ENST00000394949 M0QZ58 72 aa9.79□□□□□ -0.84
SIN3A-203ENST00000394949 Q6ZRN7 208 aaPredicted RBP9.79□□□□□ -0.84
SIN3A-203ENST00000394949 KRTAP16-1A8MUX0 517 aa9.78□□□□□ -0.84
SIN3A-203ENST00000394949 NIPBLQ6KC79 2804 aaeCLIP9.77□□□□□ -0.85
SIN3A-203ENST00000394949 KMT2BQ9UMN6 2715 aaPredicted RBP9.77□□□□□ -0.85
SIN3A-203ENST00000394949 UTP20O75691 2785 aaKnown RBP9.74□□□□□ -0.85
SIN3A-203ENST00000394949 REV3LO60673 3130 aa9.73□□□□□ -0.85
SIN3A-203ENST00000394949 DMXL2Q8TDJ6 3036 aa9.72□□□□□ -0.85
SIN3A-203ENST00000394949 XIRP2A4UGR9 3374 aa9.71□□□□□ -0.85
SIN3A-203ENST00000394949 ATMQ13315 3056 aa9.71□□□□□ -0.85
SIN3A-203ENST00000394949 COL12A1Q99715 3063 aa9.68□□□□□ -0.86
SIN3A-203ENST00000394949 KALRNO60229 2985 aa9.67□□□□□ -0.86
SIN3A-203ENST00000394949 UNC80Q8N2C7 3258 aa9.66□□□□□ -0.86
SIN3A-203ENST00000394949 KRTAP13-2Q52LG2 175 aa9.64□□□□□ -0.87
SIN3A-203ENST00000394949 FRYLO94915 3013 aa9.63□□□□□ -0.87
SIN3A-203ENST00000394949 APCP25054 2843 aa9.63□□□□□ -0.87
SIN3A-203ENST00000394949 NBEAQ8NFP9 2946 aa9.63□□□□□ -0.87
SIN3A-203ENST00000394949 ASH1LQ9NR48 2969 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms