RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 ZNF706Q9Y5V0 76 aaPredicted RBP7.53□□□□□ -1.2
UBE2D3-209ENST00000394804 IGFL1Q6UW32 110 aa7.52□□□□□ -1.21
UBE2D3-209ENST00000394804 PHF5AQ7RTV0 110 aaKnown RBP7.51□□□□□ -1.21
UBE2D3-209ENST00000394804 C1orf195Q5TG92 126 aa7.51□□□□□ -1.21
UBE2D3-209ENST00000394804 EPM2AB3EWF7 344 aa7.5□□□□□ -1.21
UBE2D3-209ENST00000394804 PSPHP1O15172 72 aa7.5□□□□□ -1.21
UBE2D3-209ENST00000394804 OXTP01178 125 aa7.5□□□□□ -1.21
UBE2D3-209ENST00000394804 CHTF8P0CG12 524 aa7.49□□□□□ -1.21
UBE2D3-209ENST00000394804 RPL37AP61513 92 aaKnown RBP7.49□□□□□ -1.21
UBE2D3-209ENST00000394804 Q5XG85 94 aa7.49□□□□□ -1.21
UBE2D3-209ENST00000394804 LINC00336Q6ZUF6 198 aa7.49□□□□□ -1.21
UBE2D3-209ENST00000394804 A0A0G2JQZ4 141 aa7.48□□□□□ -1.21
UBE2D3-209ENST00000394804 A0A1W2PNN7 141 aa7.48□□□□□ -1.21
UBE2D3-209ENST00000394804 KRTAP21-3Q3LHN1 58 aa7.48□□□□□ -1.21
UBE2D3-209ENST00000394804 C1orf64Q8NEQ6 169 aa7.48□□□□□ -1.21
UBE2D3-209ENST00000394804 SPRR4Q96PI1 79 aa7.48□□□□□ -1.21
UBE2D3-209ENST00000394804 NUPR2A6NF83 97 aa7.47□□□□□ -1.21
UBE2D3-209ENST00000394804 H3BPC8 53 aa7.47□□□□□ -1.21
UBE2D3-209ENST00000394804 ANK2Q01484 3957 aa7.47□□□□□ -1.21
UBE2D3-209ENST00000394804 SPRR1AP35321 89 aa7.46□□□□□ -1.21
UBE2D3-209ENST00000394804 CHKB-CPT1BH3BT56 60 aa7.45□□□□□ -1.22
UBE2D3-209ENST00000394804 SPINK6Q6UWN8 80 aa7.45□□□□□ -1.22
UBE2D3-209ENST00000394804 DSCR10P59022 87 aa7.45□□□□□ -1.22
UBE2D3-209ENST00000394804 K7EIL1 84 aa7.44□□□□□ -1.22
UBE2D3-209ENST00000394804 IGHV6-1A0A0B4J1U7 121 aa7.44□□□□□ -1.22
UBE2D3-209ENST00000394804 A8MWP4 228 aa7.44□□□□□ -1.22
UBE2D3-209ENST00000394804 PCOTHQ58A44 107 aa7.44□□□□□ -1.22
UBE2D3-209ENST00000394804 SPTSSBQ8NFR3 76 aa7.44□□□□□ -1.22
UBE2D3-209ENST00000394804 PRR15LQ9BU68 103 aa7.42□□□□□ -1.22
UBE2D3-209ENST00000394804 TRAV22A0A0B4J277 110 aa7.41□□□□□ -1.22
UBE2D3-209ENST00000394804 A6NED7 52 aa7.41□□□□□ -1.22
UBE2D3-209ENST00000394804 CNBPP62633 177 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-209ENST00000394804 PRR15Q8IV56 129 aa7.41□□□□□ -1.22
UBE2D3-209ENST00000394804 NBDYA0A0U1RRE5 68 aa7.4□□□□□ -1.23
UBE2D3-209ENST00000394804 TP53AIP1Q9HCN2 124 aa7.4□□□□□ -1.23
UBE2D3-209ENST00000394804 FP248Q71RG6 208 aaPredicted RBP7.39□□□□□ -1.23
UBE2D3-209ENST00000394804 LIMD2Q9BT23 127 aa7.39□□□□□ -1.23
UBE2D3-209ENST00000394804 TNP2Q05952 138 aa7.38□□□□□ -1.23
UBE2D3-209ENST00000394804 C9orf163Q8N9P6 203 aa7.38□□□□□ -1.23
UBE2D3-209ENST00000394804 KRTAP4-16G5E9R7 235 aaPredicted RBP7.37□□□□□ -1.23
UBE2D3-209ENST00000394804 MOBPQ13875 183 aa7.36□□□□□ -1.23
UBE2D3-209ENST00000394804 CMYA5Q8N3K9 4069 aa7.35□□□□□ -1.23
UBE2D3-209ENST00000394804 CIRBP-AS1Q8TBR5 109 aa7.34□□□□□ -1.23
UBE2D3-209ENST00000394804 PMAIP1Q13794 54 aa7.34□□□□□ -1.23
UBE2D3-209ENST00000394804 IGLV5-52A0A0A0MRZ9 124 aa7.34□□□□□ -1.23
UBE2D3-209ENST00000394804 FAM229BQ4G0N7 80 aa7.33□□□□□ -1.24
UBE2D3-209ENST00000394804 C4orf48Q5BLP8 95 aa7.33□□□□□ -1.24
UBE2D3-209ENST00000394804 A8MUN3 132 aa7.32□□□□□ -1.24
UBE2D3-209ENST00000394804 CYP4F30PQ9H0H9 118 aa7.31□□□□□ -1.24
UBE2D3-209ENST00000394804 APLNQ9ULZ1 77 aa7.3□□□□□ -1.24
UBE2D3-209ENST00000394804 IGLV8-61A0A075B6I0 122 aa7.3□□□□□ -1.24
UBE2D3-209ENST00000394804 SPANXA2-OT1Q8N9U9 137 aa7.3□□□□□ -1.24
UBE2D3-209ENST00000394804 MEGF8Q7Z7M0 2845 aa7.29□□□□□ -1.24
UBE2D3-209ENST00000394804 RTL8CO15255 209 aa7.28□□□□□ -1.24
UBE2D3-209ENST00000394804 C8orf17Q9NRJ1 99 aa7.28□□□□□ -1.24
UBE2D3-209ENST00000394804 LY6G6CO95867 125 aa7.28□□□□□ -1.24
UBE2D3-209ENST00000394804 COA5Q86WW8 74 aa7.28□□□□□ -1.24
UBE2D3-209ENST00000394804 Q1T7F1 81 aa7.27□□□□□ -1.25
UBE2D3-209ENST00000394804 C1orf134Q5TEV5 83 aa7.27□□□□□ -1.25
UBE2D3-209ENST00000394804 MRPL34Q9BQ48 92 aaKnown RBP7.26□□□□□ -1.25
UBE2D3-209ENST00000394804 KRTAP1-5Q9BYS1 174 aa7.26□□□□□ -1.25
UBE2D3-209ENST00000394804 SPRR1BP22528 89 aa7.26□□□□□ -1.25
UBE2D3-209ENST00000394804 FBN3Q75N90 2809 aa7.25□□□□□ -1.25
UBE2D3-209ENST00000394804 TGP01266 2768 aa7.25□□□□□ -1.25
UBE2D3-209ENST00000394804 A0A1B0GVX0 72 aa7.25□□□□□ -1.25
UBE2D3-209ENST00000394804 KRTAP7-1Q8IUC3 87 aa7.24□□□□□ -1.25
UBE2D3-209ENST00000394804 SPAG11AQ6PDA7 123 aa7.24□□□□□ -1.25
UBE2D3-209ENST00000394804 A0A087WTM6 91 aa7.22□□□□□ -1.25
UBE2D3-209ENST00000394804 LINC00472Q9H8W2 130 aa7.22□□□□□ -1.25
UBE2D3-209ENST00000394804 ZNF861PO60384 105 aa7.21□□□□□ -1.25
UBE2D3-209ENST00000394804 LOC101927531A0A1B0GV80 90 aa7.21□□□□□ -1.26
UBE2D3-209ENST00000394804 ZCCHC13Q8WW36 166 aaKnown RBP7.21□□□□□ -1.26
UBE2D3-209ENST00000394804 PSORS1C2Q9UIG4 136 aa7.2□□□□□ -1.26
UBE2D3-209ENST00000394804 MMP24-AS1A0A0U1RRL7 71 aa7.19□□□□□ -1.26
UBE2D3-209ENST00000394804 LCE6AA0A183 80 aa7.19□□□□□ -1.26
UBE2D3-209ENST00000394804 RETNLBQ9BQ08 111 aa7.19□□□□□ -1.26
UBE2D3-209ENST00000394804 PRKDCP78527 4128 aaKnown RBP7.19□□□□□ -1.26
UBE2D3-209ENST00000394804 TENM3Q9P273 2699 aa7.18□□□□□ -1.26
UBE2D3-209ENST00000394804 ANAPC11Q9NYG5 84 aa7.18□□□□□ -1.26
UBE2D3-209ENST00000394804 ACYP2P14621 99 aa7.18□□□□□ -1.26
UBE2D3-209ENST00000394804 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.17□□□□□ -1.26
UBE2D3-209ENST00000394804 STAB2Q8WWQ8 2551 aa7.17□□□□□ -1.26
UBE2D3-209ENST00000394804 KRTAP29-1A8MX34 341 aaPredicted RBP7.16□□□□□ -1.26
UBE2D3-209ENST00000394804 SEC61GP60059 68 aa7.16□□□□□ -1.26
UBE2D3-209ENST00000394804 C8orf87E5RJ46 101 aa7.16□□□□□ -1.26
UBE2D3-209ENST00000394804 SPACA4Q8TDM5 124 aa7.16□□□□□ -1.26
UBE2D3-209ENST00000394804 DNAH3Q8TD57 4116 aa7.15□□□□□ -1.26
UBE2D3-209ENST00000394804 IGLV7-46A0A075B6I9 117 aa7.15□□□□□ -1.26
UBE2D3-209ENST00000394804 LINC00313P59037 77 aa7.14□□□□□ -1.27
UBE2D3-209ENST00000394804 COL7A1Q02388 2944 aa7.13□□□□□ -1.27
UBE2D3-209ENST00000394804 SSBP3-AS1Q7Z2R9 100 aa7.12□□□□□ -1.27
UBE2D3-209ENST00000394804 Q8N9P0 234 aaPredicted RBP7.12□□□□□ -1.27
UBE2D3-209ENST00000394804 FAM229AH3BQW9 127 aa7.12□□□□□ -1.27
UBE2D3-209ENST00000394804 IGLV7-43P04211 117 aa7.1□□□□□ -1.27
UBE2D3-209ENST00000394804 IGKV2D-30A0A075B6S6 120 aa7.1□□□□□ -1.27
UBE2D3-209ENST00000394804 IGKV2-30P06310 120 aa7.1□□□□□ -1.27
UBE2D3-209ENST00000394804 KRTAP11-1Q8IUC1 163 aa7.1□□□□□ -1.27
UBE2D3-209ENST00000394804 DNAH9Q9NYC9 4486 aa7.09□□□□□ -1.27
UBE2D3-209ENST00000394804 ATP11AUNQ6ZP68 121 aa7.09□□□□□ -1.28
UBE2D3-209ENST00000394804 A0A1B0GU69 56 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms