RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 IGHV6-1A0A0B4J1U7 121 aa5.78□□□□□ -1.48
RTN4-206ENST00000394611 KRTAP21-3Q3LHN1 58 aa5.78□□□□□ -1.48
RTN4-206ENST00000394611 TENM2Q9NT68 2774 aa5.78□□□□□ -1.48
RTN4-206ENST00000394611 A0A1W2PNM2 257 aa5.78□□□□□ -1.48
RTN4-206ENST00000394611 H3BQ85 93 aa5.77□□□□□ -1.48
RTN4-206ENST00000394611 Q9BRP9 147 aa5.77□□□□□ -1.48
RTN4-206ENST00000394611 DHRS4-AS1Q9P1J3 65 aa5.77□□□□□ -1.48
RTN4-206ENST00000394611 EPM2AB3EWF7 344 aa5.77□□□□□ -1.49
RTN4-206ENST00000394611 LINC00612Q8N6U2 182 aa5.76□□□□□ -1.49
RTN4-206ENST00000394611 Q8NBF4 154 aa5.76□□□□□ -1.49
RTN4-206ENST00000394611 OCR1Q9BZK8 76 aa5.76□□□□□ -1.49
RTN4-206ENST00000394611 REG3GQ6UW15 175 aa5.75□□□□□ -1.49
RTN4-206ENST00000394611 IGLV8-61A0A075B6I0 122 aa5.75□□□□□ -1.49
RTN4-206ENST00000394611 Q8NAQ8 132 aa5.74□□□□□ -1.49
RTN4-206ENST00000394611 Q6ZRX8 168 aa5.74□□□□□ -1.49
RTN4-206ENST00000394611 C15orf56Q8N910 161 aa5.74□□□□□ -1.49
RTN4-206ENST00000394611 KRTAP10-11P60412 298 aa5.73□□□□□ -1.49
RTN4-206ENST00000394611 FLG2Q5D862 2391 aaPredicted RBP5.72□□□□□ -1.49
RTN4-206ENST00000394611 CSMD3Q7Z407 3707 aa5.72□□□□□ -1.49
RTN4-206ENST00000394611 hDV103S1A0JD37 113 aa5.72□□□□□ -1.49
RTN4-206ENST00000394611 PHF5AQ7RTV0 110 aaKnown RBP5.72□□□□□ -1.49
RTN4-206ENST00000394611 SPINK1P00995 79 aa5.71□□□□□ -1.49
RTN4-206ENST00000394611 DNAH3Q8TD57 4116 aa5.71□□□□□ -1.5
RTN4-206ENST00000394611 ANAPC11Q9NYG5 84 aa5.7□□□□□ -1.5
RTN4-206ENST00000394611 COL7A1Q02388 2944 aa5.7□□□□□ -1.5
RTN4-206ENST00000394611 IGFL1Q6UW32 110 aa5.7□□□□□ -1.5
RTN4-206ENST00000394611 DSCR10P59022 87 aa5.69□□□□□ -1.5
RTN4-206ENST00000394611 F8WDY8 70 aa5.69□□□□□ -1.5
RTN4-206ENST00000394611 BCE1O60756 84 aa5.68□□□□□ -1.5
RTN4-206ENST00000394611 PRR34Q9NV39 138 aa5.67□□□□□ -1.5
RTN4-206ENST00000394611 COA5Q86WW8 74 aa5.67□□□□□ -1.5
RTN4-206ENST00000394611 CIRBP-AS1Q8TBR5 109 aa5.65□□□□□ -1.5
RTN4-206ENST00000394611 K7EIL1 84 aa5.64□□□□□ -1.51
RTN4-206ENST00000394611 PRAC1Q96KF2 57 aa5.64□□□□□ -1.51
RTN4-206ENST00000394611 KCNQ1DNQ9H478 68 aa5.64□□□□□ -1.51
RTN4-206ENST00000394611 IGLV1-50A0A075B6I6 118 aa5.63□□□□□ -1.51
RTN4-206ENST00000394611 PRR26Q8N8Z3 221 aa5.63□□□□□ -1.51
RTN4-206ENST00000394611 MEGF8Q7Z7M0 2845 aa5.63□□□□□ -1.51
RTN4-206ENST00000394611 GVQW2A0A096LPI5 108 aaPredicted RBP5.63□□□□□ -1.51
RTN4-206ENST00000394611 LINC01556Q5JQF7 62 aa5.63□□□□□ -1.51
RTN4-206ENST00000394611 LINC00588Q9Y4M8 146 aa5.63□□□□□ -1.51
RTN4-206ENST00000394611 DNAH10OSP0CZ25 163 aa5.61□□□□□ -1.51
RTN4-206ENST00000394611 MOBPQ13875 183 aa5.61□□□□□ -1.51
RTN4-206ENST00000394611 LIMD2Q9BT23 127 aa5.61□□□□□ -1.51
RTN4-206ENST00000394611 PRR15Q8IV56 129 aa5.61□□□□□ -1.51
RTN4-206ENST00000394611 C16orf90A8MZG2 172 aa5.6□□□□□ -1.51
RTN4-206ENST00000394611 RBM12B-AS1Q9P1G2 102 aa5.59□□□□□ -1.51
RTN4-206ENST00000394611 PRKDCP78527 4128 aaKnown RBP5.59□□□□□ -1.51
RTN4-206ENST00000394611 Q5VV11 94 aa5.59□□□□□ -1.52
RTN4-206ENST00000394611 IGLV5-48A0A075B6I7 105 aa5.58□□□□□ -1.52
RTN4-206ENST00000394611 IGKV2D-30A0A075B6S6 120 aa5.58□□□□□ -1.52
RTN4-206ENST00000394611 IGKV2-30P06310 120 aa5.58□□□□□ -1.52
RTN4-206ENST00000394611 DNAH9Q9NYC9 4486 aa5.56□□□□□ -1.52
RTN4-206ENST00000394611 Q8N9P0 234 aaPredicted RBP5.56□□□□□ -1.52
RTN4-206ENST00000394611 HUWE1Q7Z6Z7 4374 aaKnown RBP5.56□□□□□ -1.52
RTN4-206ENST00000394611 Q1T7F1 81 aa5.56□□□□□ -1.52
RTN4-206ENST00000394611 KTN1-AS1Q86SY8 53 aa5.55□□□□□ -1.52
RTN4-206ENST00000394611 LOC101927531A0A1B0GV80 90 aa5.55□□□□□ -1.52
RTN4-206ENST00000394611 CD164Q04900 197 aa5.55□□□□□ -1.52
RTN4-206ENST00000394611 SPINK7P58062 85 aa5.54□□□□□ -1.52
RTN4-206ENST00000394611 A8MWP4 228 aa5.54□□□□□ -1.52
RTN4-206ENST00000394611 FBN3Q75N90 2809 aa5.54□□□□□ -1.52
RTN4-206ENST00000394611 ATP11AUNQ6ZP68 121 aa5.53□□□□□ -1.52
RTN4-206ENST00000394611 CNBPP62633 177 aaKnown RBP5.52□□□□□ -1.53
RTN4-206ENST00000394611 TGP01266 2768 aa5.52□□□□□ -1.53
RTN4-206ENST00000394611 A0A1B0GU69 56 aa5.51□□□□□ -1.53
RTN4-206ENST00000394611 LCA10Q71F78 164 aa5.5□□□□□ -1.53
RTN4-206ENST00000394611 ADM2Q7Z4H4 148 aa5.49□□□□□ -1.53
RTN4-206ENST00000394611 RTL8CO15255 209 aa5.48□□□□□ -1.53
RTN4-206ENST00000394611 SPRR4Q96PI1 79 aa5.48□□□□□ -1.53
RTN4-206ENST00000394611 KRTAP26-1Q6PEX3 210 aa5.47□□□□□ -1.53
RTN4-206ENST00000394611 SPACA4Q8TDM5 124 aa5.47□□□□□ -1.53
RTN4-206ENST00000394611 C8orf17Q9NRJ1 99 aa5.47□□□□□ -1.53
RTN4-206ENST00000394611 C7orf65Q6ZTY9 151 aa5.46□□□□□ -1.54
RTN4-206ENST00000394611 CRIPTQ9P021 101 aa5.45□□□□□ -1.54
RTN4-206ENST00000394611 CYP4F30PQ9H0H9 118 aa5.45□□□□□ -1.54
RTN4-206ENST00000394611 KRTAP11-1Q8IUC1 163 aa5.45□□□□□ -1.54
RTN4-206ENST00000394611 KRTAP7-1Q8IUC3 87 aa5.45□□□□□ -1.54
RTN4-206ENST00000394611 C14orf177Q52M58 125 aa5.44□□□□□ -1.54
RTN4-206ENST00000394611 MRPL34Q9BQ48 92 aaKnown RBP5.44□□□□□ -1.54
RTN4-206ENST00000394611 KRTAP1-5Q9BYS1 174 aa5.44□□□□□ -1.54
RTN4-206ENST00000394611 LINC00313P59037 77 aa5.44□□□□□ -1.54
RTN4-206ENST00000394611 CDC42SE1Q9NRR8 79 aa5.43□□□□□ -1.54
RTN4-206ENST00000394611 A0A087X002 238 aa5.43□□□□□ -1.54
RTN4-206ENST00000394611 NOTCH2NLQ7Z3S9 236 aa5.43□□□□□ -1.54
RTN4-206ENST00000394611 C9orf163Q8N9P6 203 aa5.43□□□□□ -1.54
RTN4-206ENST00000394611 TNP2Q05952 138 aa5.43□□□□□ -1.54
RTN4-206ENST00000394611 ZCCHC13Q8WW36 166 aaKnown RBP5.43□□□□□ -1.54
RTN4-206ENST00000394611 LY6G6CO95867 125 aa5.42□□□□□ -1.54
RTN4-206ENST00000394611 HRES1P13985 223 aa5.42□□□□□ -1.54
RTN4-206ENST00000394611 MMP24-AS1A0A0U1RRL7 71 aa5.42□□□□□ -1.54
RTN4-206ENST00000394611 C4orf48Q5BLP8 95 aa5.42□□□□□ -1.54
RTN4-206ENST00000394611 DNAH7Q8WXX0 4024 aa5.41□□□□□ -1.54
RTN4-206ENST00000394611 PANO1I0J062 215 aa5.41□□□□□ -1.54
RTN4-206ENST00000394611 A0A1B0GW54 56 aa5.41□□□□□ -1.54
RTN4-206ENST00000394611 ACYP2P14621 99 aa5.41□□□□□ -1.54
RTN4-206ENST00000394611 Q8N1X5 172 aa5.4□□□□□ -1.54
RTN4-206ENST00000394611 A0A1B0GVX0 72 aa5.4□□□□□ -1.55
RTN4-206ENST00000394611 H3BNG1 76 aa5.4□□□□□ -1.55
RTN4-206ENST00000394611 H3BS24 57 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms