RNA–Protein interactions for RNA: ENST00000394196.8

CHD2-201, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD2, Length 9,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-201ENST00000394196 S4R3F8 94 aa5.65□□□□□ -1.5
CHD2-201ENST00000394196 HELZ2Q9BYK8 2649 aaKnown RBP5.64□□□□□ -1.51
CHD2-201ENST00000394196 CASC10Q5T4H9 136 aa5.63□□□□□ -1.51
CHD2-201ENST00000394196 GIG44P09565 113 aaPredicted RBP5.63□□□□□ -1.51
CHD2-201ENST00000394196 KRTAP10-9P60411 292 aa5.63□□□□□ -1.51
CHD2-201ENST00000394196 A0A1W2PNN7 141 aa5.62□□□□□ -1.51
CHD2-201ENST00000394196 A0A087WTM6 91 aa5.62□□□□□ -1.51
CHD2-201ENST00000394196 PCNTO95613 3336 aa5.62□□□□□ -1.51
CHD2-201ENST00000394196 ZCCHC13Q8WW36 166 aaKnown RBP5.62□□□□□ -1.51
CHD2-201ENST00000394196 CHD6Q8TD26 2715 aa5.62□□□□□ -1.51
CHD2-201ENST00000394196 R4GN34 69 aa5.62□□□□□ -1.51
CHD2-201ENST00000394196 UTP20O75691 2785 aaKnown RBP5.61□□□□□ -1.51
CHD2-201ENST00000394196 GCN1Q92616 2671 aaKnown RBP5.61□□□□□ -1.51
CHD2-201ENST00000394196 A0A096LNT2 108 aa5.6□□□□□ -1.51
CHD2-201ENST00000394196 Q5W150 140 aa5.59□□□□□ -1.51
CHD2-201ENST00000394196 A0A0G2JQZ4 141 aa5.59□□□□□ -1.51
CHD2-201ENST00000394196 ANAPC11Q9NYG5 84 aa5.59□□□□□ -1.52
CHD2-201ENST00000394196 LINC00472Q9H8W2 130 aa5.58□□□□□ -1.52
CHD2-201ENST00000394196 FLNAP21333 2647 aaKnown RBP5.58□□□□□ -1.52
CHD2-201ENST00000394196 WWC2-AS2Q96NR7 200 aa5.58□□□□□ -1.52
CHD2-201ENST00000394196 SPRR1AP35321 89 aa5.58□□□□□ -1.52
CHD2-201ENST00000394196 Q6ZSA8 131 aa5.57□□□□□ -1.52
CHD2-201ENST00000394196 SPRR1BP22528 89 aa5.56□□□□□ -1.52
CHD2-201ENST00000394196 A8MUU9 505 aa5.55□□□□□ -1.52
CHD2-201ENST00000394196 PANO1I0J062 215 aa5.55□□□□□ -1.52
CHD2-201ENST00000394196 LCE6AA0A183 80 aa5.54□□□□□ -1.52
CHD2-201ENST00000394196 TEP1Q99973 2627 aaKnown RBP5.54□□□□□ -1.52
CHD2-201ENST00000394196 DNAH12Q6ZR08 3092 aa5.53□□□□□ -1.52
CHD2-201ENST00000394196 M0QZ58 72 aa5.52□□□□□ -1.53
CHD2-201ENST00000394196 SETXQ7Z333 2677 aaKnown RBP5.5□□□□□ -1.53
CHD2-201ENST00000394196 MAP1AP78559 2803 aaPredicted RBP5.49□□□□□ -1.53
CHD2-201ENST00000394196 NSD1Q96L73 2696 aaPredicted RBP5.49□□□□□ -1.53
CHD2-201ENST00000394196 Q8NDZ9 215 aa5.49□□□□□ -1.53
CHD2-201ENST00000394196 ITPR2Q14571 2701 aa5.48□□□□□ -1.53
CHD2-201ENST00000394196 CENPFP49454 3210 aa5.48□□□□□ -1.53
CHD2-201ENST00000394196 TEX15Q9BXT5 2789 aa5.48□□□□□ -1.53
CHD2-201ENST00000394196 KRTAP11-1Q8IUC1 163 aa5.47□□□□□ -1.53
CHD2-201ENST00000394196 GOLGB1Q14789 3259 aaKnown RBP5.46□□□□□ -1.53
CHD2-201ENST00000394196 KMT2BQ9UMN6 2715 aaPredicted RBP5.46□□□□□ -1.54
CHD2-201ENST00000394196 ADM2Q7Z4H4 148 aa5.44□□□□□ -1.54
CHD2-201ENST00000394196 SRCAPQ6ZRS2 3230 aa5.44□□□□□ -1.54
CHD2-201ENST00000394196 MGAQ8IWI9 3026 aa5.43□□□□□ -1.54
CHD2-201ENST00000394196 KRTAP24-1Q3LI83 254 aa5.43□□□□□ -1.54
CHD2-201ENST00000394196 PLAC8Q9NZF1 115 aa5.42□□□□□ -1.54
CHD2-201ENST00000394196 KRTAP26-1Q6PEX3 210 aa5.41□□□□□ -1.54
CHD2-201ENST00000394196 K7EIL1 84 aa5.41□□□□□ -1.54
CHD2-201ENST00000394196 KRTAP29-1A8MX34 341 aaPredicted RBP5.41□□□□□ -1.54
CHD2-201ENST00000394196 ZNF292O60281 2723 aa5.4□□□□□ -1.55
CHD2-201ENST00000394196 KRTAP10-11P60412 298 aa5.39□□□□□ -1.55
CHD2-201ENST00000394196 IGSF10Q6WRI0 2623 aa5.39□□□□□ -1.55
CHD2-201ENST00000394196 LAMA2P24043 3122 aaKnown RBP5.36□□□□□ -1.55
CHD2-201ENST00000394196 C10orf95Q9H7T3 257 aa5.36□□□□□ -1.55
CHD2-201ENST00000394196 CEP350Q5VT06 3117 aa5.35□□□□□ -1.55
CHD2-201ENST00000394196 NBEAQ8NFP9 2946 aa5.34□□□□□ -1.55
CHD2-201ENST00000394196 P0C880 135 aa5.34□□□□□ -1.56
CHD2-201ENST00000394196 KRTAP4-16G5E9R7 235 aaPredicted RBP5.33□□□□□ -1.56
CHD2-201ENST00000394196 M0R2T5 61 aa5.32□□□□□ -1.56
CHD2-201ENST00000394196 SMR3BP02814 79 aaPredicted RBP5.32□□□□□ -1.56
CHD2-201ENST00000394196 TNP1P09430 55 aa5.31□□□□□ -1.56
CHD2-201ENST00000394196 DSPP15924 2871 aaKnown RBP5.3□□□□□ -1.56
CHD2-201ENST00000394196 TRANK1O15050 2925 aa5.27□□□□□ -1.57
CHD2-201ENST00000394196 RPS29P62273 56 aaKnown RBP5.26□□□□□ -1.57
CHD2-201ENST00000394196 EP400Q96L91 3159 aa5.24□□□□□ -1.57
CHD2-201ENST00000394196 KRTAP10-3P60369 221 aa5.23□□□□□ -1.57
CHD2-201ENST00000394196 APCP25054 2843 aa5.23□□□□□ -1.57
CHD2-201ENST00000394196 UBR5O95071 2799 aaPredicted RBP5.23□□□□□ -1.57
CHD2-201ENST00000394196 INE1O15225 51 aa5.2□□□□□ -1.58
CHD2-201ENST00000394196 UTRNP46939 3433 aa5.2□□□□□ -1.58
CHD2-201ENST00000394196 TACC2O95359 2948 aa5.2□□□□□ -1.58
CHD2-201ENST00000394196 A8MU10 97 aa5.2□□□□□ -1.58
CHD2-201ENST00000394196 FRYQ5TBA9 3013 aa5.18□□□□□ -1.58
CHD2-201ENST00000394196 KRTAP23-1A1A580 65 aa5.17□□□□□ -1.58
CHD2-201ENST00000394196 ITPR1Q14643 2758 aa5.16□□□□□ -1.58
CHD2-201ENST00000394196 FLNCQ14315 2725 aa5.14□□□□□ -1.59
CHD2-201ENST00000394196 TNRC18O15417 2968 aaPredicted RBP5.13□□□□□ -1.59
CHD2-201ENST00000394196 CFAP54Q96N23 3096 aa5.12□□□□□ -1.59
CHD2-201ENST00000394196 VPS13AQ96RL7 3174 aa5.08□□□□□ -1.6
CHD2-201ENST00000394196 TRIOO75962 3097 aa5.08□□□□□ -1.6
CHD2-201ENST00000394196 KRTAP1-3Q8IUG1 177 aa5.07□□□□□ -1.6
CHD2-201ENST00000394196 CHD9Q3L8U1 2897 aa5.06□□□□□ -1.6
CHD2-201ENST00000394196 RANBP2P49792 3224 aaKnown RBP5.04□□□□□ -1.6
CHD2-201ENST00000394196 CELSR2Q9HCU4 2923 aa5.03□□□□□ -1.6
CHD2-201ENST00000394196 ZFHX3Q15911 3703 aa5.03□□□□□ -1.6
CHD2-201ENST00000394196 KRTAP1-1Q07627 177 aa5.03□□□□□ -1.6
CHD2-201ENST00000394196 H0YAA0 97 aa5.02□□□□□ -1.61
CHD2-201ENST00000394196 KALRNO60229 2985 aa5.01□□□□□ -1.61
CHD2-201ENST00000394196 TENM3Q9P273 2699 aa5.01□□□□□ -1.61
CHD2-201ENST00000394196 C5orf42Q9H799 3197 aa5.01□□□□□ -1.61
CHD2-201ENST00000394196 XIRP2A4UGR9 3374 aa5□□□□□ -1.61
CHD2-201ENST00000394196 LAMA1P25391 3075 aa4.99□□□□□ -1.61
CHD2-201ENST00000394196 PRO2289Q9P1D8 64 aa4.99□□□□□ -1.61
CHD2-201ENST00000394196 NBEAL2Q6ZNJ1 2754 aa4.99□□□□□ -1.61
CHD2-201ENST00000394196 NF1P21359 2839 aa4.97□□□□□ -1.61
CHD2-201ENST00000394196 KRTAP1-5Q9BYS1 174 aa4.97□□□□□ -1.61
CHD2-201ENST00000394196 Q5VSD8 79 aa4.96□□□□□ -1.62
CHD2-201ENST00000394196 LRBAP50851 2863 aa4.95□□□□□ -1.62
CHD2-201ENST00000394196 Q6ZRN7 208 aaPredicted RBP4.94□□□□□ -1.62
CHD2-201ENST00000394196 KRTAP13-1Q8IUC0 172 aa4.93□□□□□ -1.62
CHD2-201ENST00000394196 KRTAP10-1P60331 282 aa4.93□□□□□ -1.62
CHD2-201ENST00000394196 FRYLO94915 3013 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms