RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 Q6Q795 121 aa11.01□□□□□ -0.65
CLDND1-204ENST00000394185 HAMPP81172 84 aa11□□□□□ -0.65
CLDND1-204ENST00000394185 C1orf137Q5JT78 98 aa10.99□□□□□ -0.65
CLDND1-204ENST00000394185 Q6JHZ5 121 aa10.99□□□□□ -0.65
CLDND1-204ENST00000394185 UBL5Q9BZL1 73 aa10.99□□□□□ -0.65
CLDND1-204ENST00000394185 Q6ZVQ6 151 aa10.98□□□□□ -0.65
CLDND1-204ENST00000394185 RYR2Q92736 4967 aa10.97□□□□□ -0.65
CLDND1-204ENST00000394185 A0A1W2PNM2 257 aa10.97□□□□□ -0.65
CLDND1-204ENST00000394185 KRTAP10-1P60331 282 aa10.97□□□□□ -0.65
CLDND1-204ENST00000394185 CIRBP-AS1Q8TBR5 109 aa10.96□□□□□ -0.65
CLDND1-204ENST00000394185 IMUPQ9GZP8 106 aa10.96□□□□□ -0.66
CLDND1-204ENST00000394185 A0A087WVE0 104 aa10.94□□□□□ -0.66
CLDND1-204ENST00000394185 F8WEM9 126 aa10.93□□□□□ -0.66
CLDND1-204ENST00000394185 FAM236AA0A1B0GUQ0 79 aa10.92□□□□□ -0.66
CLDND1-204ENST00000394185 FAM236BA0A1B0GV22 79 aa10.92□□□□□ -0.66
CLDND1-204ENST00000394185 IGFL1Q6UW32 110 aa10.92□□□□□ -0.66
CLDND1-204ENST00000394185 SCXQ7RTU7 201 aa10.92□□□□□ -0.66
CLDND1-204ENST00000394185 SPRR1BP22528 89 aa10.92□□□□□ -0.66
CLDND1-204ENST00000394185 LCE6AA0A183 80 aa10.91□□□□□ -0.66
CLDND1-204ENST00000394185 Q6ZSA8 131 aa10.9□□□□□ -0.66
CLDND1-204ENST00000394185 Q8NBF4 154 aa10.9□□□□□ -0.66
CLDND1-204ENST00000394185 VPS13BQ7Z7G8 4022 aa10.89□□□□□ -0.67
CLDND1-204ENST00000394185 HIST1H4AP62805 103 aaKnown RBP10.89□□□□□ -0.67
CLDND1-204ENST00000394185 DYNC1H1Q14204 4646 aaKnown RBP10.88□□□□□ -0.67
CLDND1-204ENST00000394185 IGLV8-61A0A075B6I0 122 aa10.87□□□□□ -0.67
CLDND1-204ENST00000394185 ATP5EP2Q5VTU8 51 aa10.87□□□□□ -0.67
CLDND1-204ENST00000394185 SPRR4Q96PI1 79 aa10.87□□□□□ -0.67
CLDND1-204ENST00000394185 ZNF861PO60384 105 aa10.86□□□□□ -0.67
CLDND1-204ENST00000394185 ANAPC13Q9BS18 74 aa10.86□□□□□ -0.67
CLDND1-204ENST00000394185 ANAPC11Q9NYG5 84 aa10.86□□□□□ -0.67
CLDND1-204ENST00000394185 NREPQ16612 68 aa10.84□□□□□ -0.67
CLDND1-204ENST00000394185 IGLV7-43P04211 117 aa10.83□□□□□ -0.68
CLDND1-204ENST00000394185 CRYGAP11844 174 aa10.83□□□□□ -0.68
CLDND1-204ENST00000394185 IGLV9-49A0A0B4J1Y8 123 aa10.82□□□□□ -0.68
CLDND1-204ENST00000394185 CXCL6P80162 114 aa10.81□□□□□ -0.68
CLDND1-204ENST00000394185 Q8N9L7 120 aa10.81□□□□□ -0.68
CLDND1-204ENST00000394185 LINC00483Q53H64 154 aa10.8□□□□□ -0.68
CLDND1-204ENST00000394185 A0A087WSZ3 146 aa10.77□□□□□ -0.68
CLDND1-204ENST00000394185 A0A1B0GW54 56 aa10.77□□□□□ -0.68
CLDND1-204ENST00000394185 RYR3Q15413 4870 aa10.77□□□□□ -0.69
CLDND1-204ENST00000394185 C9orf153Q5TBE3 101 aa10.76□□□□□ -0.69
CLDND1-204ENST00000394185 ZNF706Q9Y5V0 76 aaPredicted RBP10.75□□□□□ -0.69
CLDND1-204ENST00000394185 BPY2O14599 106 aa10.75□□□□□ -0.69
CLDND1-204ENST00000394185 APOBP04114 4563 aaKnown RBP10.74□□□□□ -0.69
CLDND1-204ENST00000394185 LINC00336Q6ZUF6 198 aa10.73□□□□□ -0.69
CLDND1-204ENST00000394185 A0A1B0GVY2 172 aa10.73□□□□□ -0.69
CLDND1-204ENST00000394185 DEFB116Q30KQ4 102 aa10.73□□□□□ -0.69
CLDND1-204ENST00000394185 MOBPQ13875 183 aa10.72□□□□□ -0.69
CLDND1-204ENST00000394185 CCDC179H3BU77 68 aa10.71□□□□□ -0.69
CLDND1-204ENST00000394185 IGKV4-1P06312 121 aa10.7□□□□□ -0.7
CLDND1-204ENST00000394185 FAT1Q14517 4588 aa10.7□□□□□ -0.7
CLDND1-204ENST00000394185 HRCT1Q6UXD1 115 aa10.69□□□□□ -0.7
CLDND1-204ENST00000394185 ATOX1O00244 68 aa10.67□□□□□ -0.7
CLDND1-204ENST00000394185 DSCR10P59022 87 aa10.67□□□□□ -0.7
CLDND1-204ENST00000394185 K7EQZ3 153 aa10.64□□□□□ -0.71
CLDND1-204ENST00000394185 RPL37AP61513 92 aaKnown RBP10.61□□□□□ -0.71
CLDND1-204ENST00000394185 A0A087X002 238 aa10.6□□□□□ -0.71
CLDND1-204ENST00000394185 SMR3BP02814 79 aaPredicted RBP10.6□□□□□ -0.71
CLDND1-204ENST00000394185 LINC00472Q9H8W2 130 aa10.59□□□□□ -0.71
CLDND1-204ENST00000394185 COX7CP15954 63 aa10.57□□□□□ -0.72
CLDND1-204ENST00000394185 SERP2Q8N6R1 65 aa10.57□□□□□ -0.72
CLDND1-204ENST00000394185 KRTAP1-4P0C5Y4 121 aa10.56□□□□□ -0.72
CLDND1-204ENST00000394185 KRTAP13-2Q52LG2 175 aa10.56□□□□□ -0.72
CLDND1-204ENST00000394185 UQCRQO14949 82 aa10.54□□□□□ -0.72
CLDND1-204ENST00000394185 Q96NJ1 140 aa10.54□□□□□ -0.72
CLDND1-204ENST00000394185 CYSTM1Q9H1C7 97 aa10.5□□□□□ -0.73
CLDND1-204ENST00000394185 A8MWP4 228 aa10.47□□□□□ -0.73
CLDND1-204ENST00000394185 SSBP3-AS1Q7Z2R9 100 aa10.47□□□□□ -0.73
CLDND1-204ENST00000394185 TRAV7A0A075B6U4 112 aa10.46□□□□□ -0.73
CLDND1-204ENST00000394185 HCG22E2RYF7 251 aa10.46□□□□□ -0.74
CLDND1-204ENST00000394185 PRR15Q8IV56 129 aa10.46□□□□□ -0.74
CLDND1-204ENST00000394185 PLA2G1BP04054 148 aaKnown RBP10.45□□□□□ -0.74
CLDND1-204ENST00000394185 FAM229BQ4G0N7 80 aa10.45□□□□□ -0.74
CLDND1-204ENST00000394185 SS18L2Q9UHA2 77 aa10.45□□□□□ -0.74
CLDND1-204ENST00000394185 WFDC13Q8IUB5 93 aa10.45□□□□□ -0.74
CLDND1-204ENST00000394185 HSPG2P98160 4391 aa10.44□□□□□ -0.74
CLDND1-204ENST00000394185 KRTAP10-4P60372 401 aaPredicted RBP10.44□□□□□ -0.74
CLDND1-204ENST00000394185 OCR1Q9BZK8 76 aa10.44□□□□□ -0.74
CLDND1-204ENST00000394185 SPINK6Q6UWN8 80 aa10.42□□□□□ -0.74
CLDND1-204ENST00000394185 C20orf197Q8N268 126 aa10.41□□□□□ -0.74
CLDND1-204ENST00000394185 SMIM20Q8N5G0 67 aa10.41□□□□□ -0.74
CLDND1-204ENST00000394185 J3KT08 172 aa10.41□□□□□ -0.74
CLDND1-204ENST00000394185 CD164Q04900 197 aa10.4□□□□□ -0.74
CLDND1-204ENST00000394185 KRTAP29-1A8MX34 341 aaPredicted RBP10.38□□□□□ -0.75
CLDND1-204ENST00000394185 EPPK1P58107 5090 aaKnown RBP10.37□□□□□ -0.75
CLDND1-204ENST00000394185 PRR26Q8N8Z3 221 aa10.36□□□□□ -0.75
CLDND1-204ENST00000394185 RYR1P21817 5038 aa10.36□□□□□ -0.75
CLDND1-204ENST00000394185 SNURFQ9Y675 71 aa10.36□□□□□ -0.75
CLDND1-204ENST00000394185 MMP24-AS1A0A0U1RRL7 71 aa10.35□□□□□ -0.75
CLDND1-204ENST00000394185 CASC2Q6XLA1 102 aa10.35□□□□□ -0.75
CLDND1-204ENST00000394185 NDUFB1O75438 58 aa10.35□□□□□ -0.75
CLDND1-204ENST00000394185 TYMSOSQ8TAI1 123 aa10.35□□□□□ -0.75
CLDND1-204ENST00000394185 IGHV6-1A0A0B4J1U7 121 aa10.34□□□□□ -0.75
CLDND1-204ENST00000394185 NOTCH2NLQ7Z3S9 236 aa10.33□□□□□ -0.76
CLDND1-204ENST00000394185 PKHD1L1Q86WI1 4243 aa10.32□□□□□ -0.76
CLDND1-204ENST00000394185 A0A1B0GVX0 72 aa10.32□□□□□ -0.76
CLDND1-204ENST00000394185 KIAA1109Q2LD37 5005 aa10.32□□□□□ -0.76
CLDND1-204ENST00000394185 LRP1Q07954 4544 aaKnown RBP10.3□□□□□ -0.76
CLDND1-204ENST00000394185 TMEM254Q8TBM7 123 aa10.29□□□□□ -0.76
CLDND1-204ENST00000394185 CDK2AP2O75956 126 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms