RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 FRYQ5TBA9 3013 aa10.25□□□□□ -0.77
SCN3B-202ENST00000392770 MGAM2Q2M2H8 2515 aa10.24□□□□□ -0.77
SCN3B-202ENST00000392770 A8MUN3 132 aa10.23□□□□□ -0.77
SCN3B-202ENST00000392770 MYO15AQ9UKN7 3530 aa10.23□□□□□ -0.77
SCN3B-202ENST00000392770 MAST4O15021 2626 aa10.22□□□□□ -0.77
SCN3B-202ENST00000392770 PRR26Q8N8Z3 221 aa10.2□□□□□ -0.78
SCN3B-202ENST00000392770 FREM2Q5SZK8 3169 aa10.19□□□□□ -0.78
SCN3B-202ENST00000392770 OCR1Q9BZK8 76 aa10.19□□□□□ -0.78
SCN3B-202ENST00000392770 FRYLO94915 3013 aa10.17□□□□□ -0.78
SCN3B-202ENST00000392770 FAM229BQ4G0N7 80 aa10.16□□□□□ -0.78
SCN3B-202ENST00000392770 BOD1L1Q8NFC6 3051 aa10.14□□□□□ -0.79
SCN3B-202ENST00000392770 SPRR1BP22528 89 aa10.12□□□□□ -0.79
SCN3B-202ENST00000392770 SPANXA2-OT1Q8N9U9 137 aa10.12□□□□□ -0.79
SCN3B-202ENST00000392770 CYP4F30PQ9H0H9 118 aa10.12□□□□□ -0.79
SCN3B-202ENST00000392770 UNC79Q9P2D8 2635 aa10.11□□□□□ -0.79
SCN3B-202ENST00000392770 KTN1-AS1Q86SY8 53 aa10.1□□□□□ -0.79
SCN3B-202ENST00000392770 TEX15Q9BXT5 2789 aa10.09□□□□□ -0.79
SCN3B-202ENST00000392770 KRTAP10-2P60368 255 aa10.09□□□□□ -0.79
SCN3B-202ENST00000392770 DMXL2Q8TDJ6 3036 aa10.09□□□□□ -0.79
SCN3B-202ENST00000392770 Q8N1X5 172 aa10.08□□□□□ -0.8
SCN3B-202ENST00000392770 CHD6Q8TD26 2715 aa10.08□□□□□ -0.8
SCN3B-202ENST00000392770 KRTAP10-1P60331 282 aa10.07□□□□□ -0.8
SCN3B-202ENST00000392770 LRBAP50851 2863 aa10.07□□□□□ -0.8
SCN3B-202ENST00000392770 MMP24-AS1A0A0U1RRL7 71 aa10.07□□□□□ -0.8
SCN3B-202ENST00000392770 ATMQ13315 3056 aa10.06□□□□□ -0.8
SCN3B-202ENST00000392770 LCA10Q71F78 164 aa10.05□□□□□ -0.8
SCN3B-202ENST00000392770 PANO1I0J062 215 aa10.04□□□□□ -0.8
SCN3B-202ENST00000392770 LCE6AA0A183 80 aa10.03□□□□□ -0.8
SCN3B-202ENST00000392770 UQCR11O14957 56 aa10.03□□□□□ -0.8
SCN3B-202ENST00000392770 LINC01554Q52M75 96 aa10.02□□□□□ -0.8
SCN3B-202ENST00000392770 LINC00472Q9H8W2 130 aa10.02□□□□□ -0.81
SCN3B-202ENST00000392770 Q6ZR54 194 aa10.01□□□□□ -0.81
SCN3B-202ENST00000392770 KRTAP4-16G5E9R7 235 aaPredicted RBP10□□□□□ -0.81
SCN3B-202ENST00000392770 IGLV7-46A0A075B6I9 117 aa10□□□□□ -0.81
SCN3B-202ENST00000392770 RBM12B-AS1Q9P1G2 102 aa10□□□□□ -0.81
SCN3B-202ENST00000392770 ADGRG4Q8IZF6 3080 aa10□□□□□ -0.81
SCN3B-202ENST00000392770 SETXQ7Z333 2677 aaKnown RBP9.99□□□□□ -0.81
SCN3B-202ENST00000392770 DMXL1Q9Y485 3027 aa9.99□□□□□ -0.81
SCN3B-202ENST00000392770 LINC00483Q53H64 154 aa9.97□□□□□ -0.81
SCN3B-202ENST00000392770 MIR22HGQ0VDD5 57 aa9.97□□□□□ -0.81
SCN3B-202ENST00000392770 TEP1Q99973 2627 aaKnown RBP9.96□□□□□ -0.82
SCN3B-202ENST00000392770 GCN1Q92616 2671 aaKnown RBP9.95□□□□□ -0.82
SCN3B-202ENST00000392770 MAP1AP78559 2803 aaPredicted RBP9.94□□□□□ -0.82
SCN3B-202ENST00000392770 KALRNO60229 2985 aa9.94□□□□□ -0.82
SCN3B-202ENST00000392770 NBEAQ8NFP9 2946 aa9.94□□□□□ -0.82
SCN3B-202ENST00000392770 CRIPTQ9P021 101 aa9.94□□□□□ -0.82
SCN3B-202ENST00000392770 HRES1P13985 223 aa9.93□□□□□ -0.82
SCN3B-202ENST00000392770 COL12A1Q99715 3063 aa9.93□□□□□ -0.82
SCN3B-202ENST00000392770 Q5VSD8 79 aa9.9□□□□□ -0.82
SCN3B-202ENST00000392770 ZCCHC13Q8WW36 166 aaKnown RBP9.9□□□□□ -0.82
SCN3B-202ENST00000392770 UTP20O75691 2785 aaKnown RBP9.9□□□□□ -0.83
SCN3B-202ENST00000392770 Q6ZSA8 131 aa9.89□□□□□ -0.83
SCN3B-202ENST00000392770 CYSTM1Q9H1C7 97 aa9.89□□□□□ -0.83
SCN3B-202ENST00000392770 Q6ZRN7 208 aaPredicted RBP9.89□□□□□ -0.83
SCN3B-202ENST00000392770 FLNCQ14315 2725 aa9.88□□□□□ -0.83
SCN3B-202ENST00000392770 Q8N9P0 234 aaPredicted RBP9.86□□□□□ -0.83
SCN3B-202ENST00000392770 BAHCC1Q9P281 2608 aa9.86□□□□□ -0.83
SCN3B-202ENST00000392770 A0A0D9SG42 100 aa9.85□□□□□ -0.83
SCN3B-202ENST00000392770 KRTAP11-1Q8IUC1 163 aa9.85□□□□□ -0.83
SCN3B-202ENST00000392770 Q5W150 140 aa9.84□□□□□ -0.83
SCN3B-202ENST00000392770 COL6A5A8TX70 2615 aa9.83□□□□□ -0.84
SCN3B-202ENST00000392770 KRTAP7-1Q8IUC3 87 aa9.83□□□□□ -0.84
SCN3B-202ENST00000392770 ITPR1Q14643 2758 aa9.83□□□□□ -0.84
SCN3B-202ENST00000392770 LOC400499M0QZD8 3231 aa9.83□□□□□ -0.84
SCN3B-202ENST00000392770 H3BS24 57 aa9.82□□□□□ -0.84
SCN3B-202ENST00000392770 Q1T7F1 81 aa9.82□□□□□ -0.84
SCN3B-202ENST00000392770 NBEAL2Q6ZNJ1 2754 aa9.81□□□□□ -0.84
SCN3B-202ENST00000392770 ITPR2Q14571 2701 aa9.81□□□□□ -0.84
SCN3B-202ENST00000392770 WDFY3Q8IZQ1 3526 aa9.81□□□□□ -0.84
SCN3B-202ENST00000392770 CDC42SE1Q9NRR8 79 aa9.8□□□□□ -0.84
SCN3B-202ENST00000392770 HRNRQ86YZ3 2850 aaPredicted RBP9.77□□□□□ -0.85
SCN3B-202ENST00000392770 A0A087X002 238 aa9.76□□□□□ -0.85
SCN3B-202ENST00000392770 M0R2T5 61 aa9.75□□□□□ -0.85
SCN3B-202ENST00000392770 APCP25054 2843 aa9.72□□□□□ -0.85
SCN3B-202ENST00000392770 CFAP47Q6ZTR5 3102 aa9.71□□□□□ -0.85
SCN3B-202ENST00000392770 KMT2BQ9UMN6 2715 aaPredicted RBP9.71□□□□□ -0.86
SCN3B-202ENST00000392770 UBR5O95071 2799 aaPredicted RBP9.7□□□□□ -0.86
SCN3B-202ENST00000392770 DMDP11532 3685 aa9.7□□□□□ -0.86
SCN3B-202ENST00000392770 NOTCH1P46531 2555 aa9.7□□□□□ -0.86
SCN3B-202ENST00000392770 ZZEF1O43149 2961 aa9.69□□□□□ -0.86
SCN3B-202ENST00000392770 SPINK7P58062 85 aa9.69□□□□□ -0.86
SCN3B-202ENST00000392770 STAB1Q9NY15 2570 aa9.68□□□□□ -0.86
SCN3B-202ENST00000392770 TACC2O95359 2948 aa9.67□□□□□ -0.86
SCN3B-202ENST00000392770 KRTAP29-1A8MX34 341 aaPredicted RBP9.66□□□□□ -0.86
SCN3B-202ENST00000392770 S4R3F8 94 aa9.66□□□□□ -0.86
SCN3B-202ENST00000392770 Q75L30 129 aa9.65□□□□□ -0.86
SCN3B-202ENST00000392770 Q5XG85 94 aa9.64□□□□□ -0.87
SCN3B-202ENST00000392770 LINC01558Q9Y6Z2 57 aa9.64□□□□□ -0.87
SCN3B-202ENST00000392770 KRTAP21-3Q3LHN1 58 aa9.64□□□□□ -0.87
SCN3B-202ENST00000392770 HIVEP1P15822 2718 aa9.63□□□□□ -0.87
SCN3B-202ENST00000392770 LUZP6Q538Z0 58 aa9.63□□□□□ -0.87
SCN3B-202ENST00000392770 KRTAP13-1Q8IUC0 172 aa9.62□□□□□ -0.87
SCN3B-202ENST00000392770 A0A1B0GU33 70 aa9.62□□□□□ -0.87
SCN3B-202ENST00000392770 FP248Q71RG6 208 aaPredicted RBP9.62□□□□□ -0.87
SCN3B-202ENST00000392770 CAMK2N1Q7Z7J9 78 aa9.61□□□□□ -0.87
SCN3B-202ENST00000392770 ASPMQ8IZT6 3477 aa9.61□□□□□ -0.87
SCN3B-202ENST00000392770 NOTCH2NLQ7Z3S9 236 aa9.59□□□□□ -0.87
SCN3B-202ENST00000392770 ZFHX4Q86UP3 3567 aa9.58□□□□□ -0.88
SCN3B-202ENST00000392770 PRAC1Q96KF2 57 aa9.57□□□□□ -0.88
SCN3B-202ENST00000392770 ASB16-AS1Q495Z4 193 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms