RNA–Protein interactions for RNA: ENST00000392590.3

CDCA4-202, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-202ENST00000392590 HRCT1Q6UXD1 115 aa11.77□□□□□ -0.52
CDCA4-202ENST00000392590 LPAP08519 4548 aa11.76□□□□□ -0.53
CDCA4-202ENST00000392590 F8WEM9 126 aa11.76□□□□□ -0.53
CDCA4-202ENST00000392590 FP248Q71RG6 208 aaPredicted RBP11.76□□□□□ -0.53
CDCA4-202ENST00000392590 FAM218AQ96MZ4 157 aa11.76□□□□□ -0.53
CDCA4-202ENST00000392590 TRIAP1O43715 76 aa11.74□□□□□ -0.53
CDCA4-202ENST00000392590 CD164Q04900 197 aa11.73□□□□□ -0.53
CDCA4-202ENST00000392590 PPDPFLQ8WWR9 84 aa11.73□□□□□ -0.53
CDCA4-202ENST00000392590 LOC105371267A0A1B0GV96 52 aa11.72□□□□□ -0.53
CDCA4-202ENST00000392590 PSMB2P49721 201 aa11.72□□□□□ -0.53
CDCA4-202ENST00000392590 SNHG12Q9BXW3 62 aa11.71□□□□□ -0.53
CDCA4-202ENST00000392590 A0A0G2JQZ4 141 aa11.7□□□□□ -0.54
CDCA4-202ENST00000392590 A0A1B0GX51 115 aa11.7□□□□□ -0.54
CDCA4-202ENST00000392590 OCIAD2Q56VL3 154 aa11.7□□□□□ -0.54
CDCA4-202ENST00000392590 LIMD2Q9BT23 127 aa11.7□□□□□ -0.54
CDCA4-202ENST00000392590 TPRXLQ17RH7 258 aa11.7□□□□□ -0.54
CDCA4-202ENST00000392590 COX6CP09669 75 aa11.67□□□□□ -0.54
CDCA4-202ENST00000392590 CLEC2BQ92478 149 aa11.66□□□□□ -0.54
CDCA4-202ENST00000392590 IGLV8-61A0A075B6I0 122 aa11.65□□□□□ -0.54
CDCA4-202ENST00000392590 Q6JHZ5 121 aa11.65□□□□□ -0.54
CDCA4-202ENST00000392590 CDIP1Q9H305 208 aa11.65□□□□□ -0.54
CDCA4-202ENST00000392590 M0R143 59 aa11.65□□□□□ -0.55
CDCA4-202ENST00000392590 GHRHP01286 108 aa11.65□□□□□ -0.55
CDCA4-202ENST00000392590 TSTD3H0UI37 97 aa11.63□□□□□ -0.55
CDCA4-202ENST00000392590 IGFL1Q6UW32 110 aa11.61□□□□□ -0.55
CDCA4-202ENST00000392590 DNAL4O96015 105 aa11.6□□□□□ -0.55
CDCA4-202ENST00000392590 Q5XG85 94 aa11.6□□□□□ -0.55
CDCA4-202ENST00000392590 FABP2P12104 132 aa11.6□□□□□ -0.55
CDCA4-202ENST00000392590 NDUFV3P56181 108 aaKnown RBP11.6□□□□□ -0.55
CDCA4-202ENST00000392590 H3BUT2 72 aa11.59□□□□□ -0.55
CDCA4-202ENST00000392590 SCGB1C2P0DMR2 95 aa11.59□□□□□ -0.55
CDCA4-202ENST00000392590 KRTAP13-3Q3SY46 172 aa11.59□□□□□ -0.55
CDCA4-202ENST00000392590 TCL1BO95988 128 aa11.55□□□□□ -0.56
CDCA4-202ENST00000392590 ORMDL1Q9P0S3 153 aa11.55□□□□□ -0.56
CDCA4-202ENST00000392590 H3BQ85 93 aa11.54□□□□□ -0.56
CDCA4-202ENST00000392590 TRBV7-7A0A0K0K1E9 115 aa11.53□□□□□ -0.56
CDCA4-202ENST00000392590 H3BMG7 143 aa11.53□□□□□ -0.56
CDCA4-202ENST00000392590 C1orf195Q5TG92 126 aa11.52□□□□□ -0.57
CDCA4-202ENST00000392590 RNF213Q63HN8 5207 aa11.51□□□□□ -0.57
CDCA4-202ENST00000392590 TMEM256-PLSCR3K7ERE1 68 aa11.5□□□□□ -0.57
CDCA4-202ENST00000392590 TRACP01848 142 aa11.5□□□□□ -0.57
CDCA4-202ENST00000392590 LST1O00453 97 aa11.5□□□□□ -0.57
CDCA4-202ENST00000392590 BATFQ16520 125 aa11.48□□□□□ -0.57
CDCA4-202ENST00000392590 NAA38Q9BRA0 125 aaKnown RBP11.47□□□□□ -0.57
CDCA4-202ENST00000392590 Q6Q795 121 aa11.45□□□□□ -0.58
CDCA4-202ENST00000392590 ASB16-AS1Q495Z4 193 aa11.45□□□□□ -0.58
CDCA4-202ENST00000392590 TEN1Q86WV5 123 aa11.45□□□□□ -0.58
CDCA4-202ENST00000392590 UBE2V1Q13404 147 aa11.43□□□□□ -0.58
CDCA4-202ENST00000392590 A0A1B0GV72 72 aa11.42□□□□□ -0.58
CDCA4-202ENST00000392590 ANKRD29Q8N6D5 301 aa11.41□□□□□ -0.58
CDCA4-202ENST00000392590 ATXN8Q156A1 80 aa11.4□□□□□ -0.58
CDCA4-202ENST00000392590 C9orf92A6NGG3 77 aa11.4□□□□□ -0.59
CDCA4-202ENST00000392590 XP32Q5T750 250 aa11.4□□□□□ -0.59
CDCA4-202ENST00000392590 BAALC-AS2P0C853 105 aa11.38□□□□□ -0.59
CDCA4-202ENST00000392590 SS18L2Q9UHA2 77 aa11.38□□□□□ -0.59
CDCA4-202ENST00000392590 A0A087WSZ3 146 aa11.36□□□□□ -0.59
CDCA4-202ENST00000392590 A0A1W2PNM2 257 aa11.36□□□□□ -0.59
CDCA4-202ENST00000392590 LYRM7Q5U5X0 104 aa11.36□□□□□ -0.59
CDCA4-202ENST00000392590 SEC61BP60468 96 aaKnown RBP11.35□□□□□ -0.59
CDCA4-202ENST00000392590 TRBV7-4A0A0J9YYF1 115 aa11.32□□□□□ -0.6
CDCA4-202ENST00000392590 RBM3P98179 157 aaKnown RBP11.32□□□□□ -0.6
CDCA4-202ENST00000392590 TRBV20-1A0A075B6N2 111 aa11.31□□□□□ -0.6
CDCA4-202ENST00000392590 C9orf118A6NHY6 69 aa11.31□□□□□ -0.6
CDCA4-202ENST00000392590 MUC2Q02817 5179 aa11.3□□□□□ -0.6
CDCA4-202ENST00000392590 TAX1BP3O14907 124 aa11.3□□□□□ -0.6
CDCA4-202ENST00000392590 CCKP06307 115 aa11.3□□□□□ -0.6
CDCA4-202ENST00000392590 DSCR8Q96T75 97 aa11.29□□□□□ -0.6
CDCA4-202ENST00000392590 MUC17Q685J3 4493 aa11.28□□□□□ -0.6
CDCA4-202ENST00000392590 A0A1W2PPM0 123 aa11.25□□□□□ -0.61
CDCA4-202ENST00000392590 VPS25Q9BRG1 176 aa11.24□□□□□ -0.61
CDCA4-202ENST00000392590 C9JAW5 83 aa11.23□□□□□ -0.61
CDCA4-202ENST00000392590 JMJD7-PLA2G4BH0Y9G9 81 aa11.23□□□□□ -0.61
CDCA4-202ENST00000392590 A0A0U1RQV1 116 aa11.22□□□□□ -0.61
CDCA4-202ENST00000392590 Q96NJ1 140 aa11.22□□□□□ -0.61
CDCA4-202ENST00000392590 PCOTHQ58A44 107 aa11.19□□□□□ -0.62
CDCA4-202ENST00000392590 OBSCN-AS1Q96MR7 158 aa11.19□□□□□ -0.62
CDCA4-202ENST00000392590 COL5A1-AS1Q5SY13 56 aa11.17□□□□□ -0.62
CDCA4-202ENST00000392590 KRTAP4-1Q9BYQ7 146 aa11.16□□□□□ -0.62
CDCA4-202ENST00000392590 RPL37P61927 97 aaKnown RBP11.15□□□□□ -0.62
CDCA4-202ENST00000392590 IGKV4-1P06312 121 aa11.14□□□□□ -0.63
CDCA4-202ENST00000392590 SIGMAR1Q99720 223 aa11.14□□□□□ -0.63
CDCA4-202ENST00000392590 LOC110117498A0A087WWA1 95 aa11.14□□□□□ -0.63
CDCA4-202ENST00000392590 LINC00472Q9H8W2 130 aa11.14□□□□□ -0.63
CDCA4-202ENST00000392590 PDE6GP18545 87 aa11.13□□□□□ -0.63
CDCA4-202ENST00000392590 C21orf62-AS1Q17RA5 79 aa11.13□□□□□ -0.63
CDCA4-202ENST00000392590 Q6ZQT0 140 aa11.13□□□□□ -0.63
CDCA4-202ENST00000392590 H3BT86 120 aa11.12□□□□□ -0.63
CDCA4-202ENST00000392590 DEFB116Q30KQ4 102 aa11.12□□□□□ -0.63
CDCA4-202ENST00000392590 C14orf132Q9NPU4 83 aa11.11□□□□□ -0.63
CDCA4-202ENST00000392590 SPCS1Q9Y6A9 102 aa11.11□□□□□ -0.63
CDCA4-202ENST00000392590 PCP4L1A6NKN8 68 aa11.1□□□□□ -0.63
CDCA4-202ENST00000392590 MTURNQ8N3F0 131 aa11.1□□□□□ -0.63
CDCA4-202ENST00000392590 A0A1B0GW54 56 aa11.07□□□□□ -0.64
CDCA4-202ENST00000392590 DSCR10P59022 87 aa11.06□□□□□ -0.64
CDCA4-202ENST00000392590 Q75L30 129 aa11.06□□□□□ -0.64
CDCA4-202ENST00000392590 LINC00313P59037 77 aa11.04□□□□□ -0.64
CDCA4-202ENST00000392590 ATP11AUNQ6ZP68 121 aa11.02□□□□□ -0.65
CDCA4-202ENST00000392590 IGHV6-1A0A0B4J1U7 121 aa10.99□□□□□ -0.65
CDCA4-202ENST00000392590 J3KT08 172 aa10.99□□□□□ -0.65
CDCA4-202ENST00000392590 C20orf166-AS1Q96NR2 134 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms