RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 POLQO75417 2590 aa1.35□□□□□ -2.19
TRAJ17-201ENST00000390520 KRTAP10-7P60409 375 aaPredicted RBP1.34□□□□□ -2.19
TRAJ17-201ENST00000390520 PRLHP81277 87 aa1.34□□□□□ -2.19
TRAJ17-201ENST00000390520 KRTAP1-1Q07627 177 aa1.34□□□□□ -2.19
TRAJ17-201ENST00000390520 LCE1DQ5T752 114 aa1.34□□□□□ -2.19
TRAJ17-201ENST00000390520 AKAP6Q13023 2319 aa1.34□□□□□ -2.2
TRAJ17-201ENST00000390520 CHD9Q3L8U1 2897 aa1.33□□□□□ -2.2
TRAJ17-201ENST00000390520 HECTD1Q9ULT8 2610 aa1.33□□□□□ -2.2
TRAJ17-201ENST00000390520 RPL39P5Q59GN2 51 aa1.33□□□□□ -2.2
TRAJ17-201ENST00000390520 KRTAP13-1Q8IUC0 172 aa1.33□□□□□ -2.2
TRAJ17-201ENST00000390520 DEFB106AQ8N104 65 aa1.33□□□□□ -2.2
TRAJ17-201ENST00000390520 DEFB104AQ8WTQ1 72 aa1.33□□□□□ -2.2
TRAJ17-201ENST00000390520 ACACAQ13085 2346 aa1.33□□□□□ -2.2
TRAJ17-201ENST00000390520 KLK9Q2XQG4 91 aa1.32□□□□□ -2.2
TRAJ17-201ENST00000390520 PKD1L2Q7Z442 2459 aa1.32□□□□□ -2.2
TRAJ17-201ENST00000390520 AKAP13Q12802 2813 aa1.31□□□□□ -2.2
TRAJ17-201ENST00000390520 CREBBPQ92793 2442 aa1.3□□□□□ -2.2
TRAJ17-201ENST00000390520 ATRQ13535 2644 aa1.3□□□□□ -2.2
TRAJ17-201ENST00000390520 TENM2Q9NT68 2774 aa1.3□□□□□ -2.2
TRAJ17-201ENST00000390520 A0A0D9SG42 100 aa1.3□□□□□ -2.2
TRAJ17-201ENST00000390520 SETD2Q9BYW2 2564 aaPredicted RBP1.29□□□□□ -2.2
TRAJ17-201ENST00000390520 CRYBG3Q68DQ2 2970 aa1.29□□□□□ -2.2
TRAJ17-201ENST00000390520 NOP10Q9NPE3 64 aaKnown RBP1.29□□□□□ -2.2
TRAJ17-201ENST00000390520 RP1L1Q8IWN7 2480 aaPredicted RBP1.28□□□□□ -2.2
TRAJ17-201ENST00000390520 SPTBN4Q9H254 2564 aa1.28□□□□□ -2.2
TRAJ17-201ENST00000390520 DEFB108AA8MXU0 73 aa1.28□□□□□ -2.2
TRAJ17-201ENST00000390520 CEP250Q9BV73 2442 aa1.28□□□□□ -2.2
TRAJ17-201ENST00000390520 TTC28Q96AY4 2481 aa1.27□□□□□ -2.21
TRAJ17-201ENST00000390520 LCE3EQ5T5B0 92 aa1.27□□□□□ -2.21
TRAJ17-201ENST00000390520 KRTAP4-12Q9BQ66 201 aa1.27□□□□□ -2.21
TRAJ17-201ENST00000390520 CSMD3Q7Z407 3707 aa1.27□□□□□ -2.21
TRAJ17-201ENST00000390520 BDP1A6H8Y1 2624 aa1.26□□□□□ -2.21
TRAJ17-201ENST00000390520 KRTAP9-8Q9BYQ0 159 aa1.26□□□□□ -2.21
TRAJ17-201ENST00000390520 NAV2Q8IVL1 2488 aa1.26□□□□□ -2.21
TRAJ17-201ENST00000390520 SPINK1P00995 79 aa1.25□□□□□ -2.21
TRAJ17-201ENST00000390520 TNRC18O15417 2968 aaPredicted RBP1.25□□□□□ -2.21
TRAJ17-201ENST00000390520 EP300Q09472 2414 aaPredicted RBP1.25□□□□□ -2.21
TRAJ17-201ENST00000390520 NBASA2RRP1 2371 aa1.25□□□□□ -2.21
TRAJ17-201ENST00000390520 KRTAP10-5P60370 271 aa1.24□□□□□ -2.21
TRAJ17-201ENST00000390520 CHD6Q8TD26 2715 aa1.24□□□□□ -2.21
TRAJ17-201ENST00000390520 ANK2Q01484 3957 aa1.23□□□□□ -2.21
TRAJ17-201ENST00000390520 EPG5Q9HCE0 2579 aa1.22□□□□□ -2.21
TRAJ17-201ENST00000390520 PIEZO1Q92508 2521 aa1.22□□□□□ -2.21
TRAJ17-201ENST00000390520 J3QKU1 62 aa1.22□□□□□ -2.21
TRAJ17-201ENST00000390520 APCP25054 2843 aa1.22□□□□□ -2.21
TRAJ17-201ENST00000390520 CELSR1Q9NYQ6 3014 aa1.22□□□□□ -2.21
TRAJ17-201ENST00000390520 CCDC168Q8NDH2 2452 aa1.22□□□□□ -2.21
TRAJ17-201ENST00000390520 NCOR1O75376 2440 aa1.21□□□□□ -2.22
TRAJ17-201ENST00000390520 DMBT1Q9UGM3 2413 aaPredicted RBP1.21□□□□□ -2.22
TRAJ17-201ENST00000390520 COL6A5A8TX70 2615 aa1.21□□□□□ -2.22
TRAJ17-201ENST00000390520 DNAH11Q96DT5 4516 aa1.21□□□□□ -2.22
TRAJ17-201ENST00000390520 NBPF19A0A087WUL8 3843 aa1.2□□□□□ -2.22
TRAJ17-201ENST00000390520 PDZD2O15018 2839 aa1.2□□□□□ -2.22
TRAJ17-201ENST00000390520 RANBP2P49792 3224 aaKnown RBP1.19□□□□□ -2.22
TRAJ17-201ENST00000390520 LCE3DQ9BYE3 92 aa1.19□□□□□ -2.22
TRAJ17-201ENST00000390520 USP24Q9UPU5 2620 aa1.19□□□□□ -2.22
TRAJ17-201ENST00000390520 FRYQ5TBA9 3013 aa1.19□□□□□ -2.22
TRAJ17-201ENST00000390520 MAP1BP46821 2468 aaKnown RBP1.18□□□□□ -2.22
TRAJ17-201ENST00000390520 USP9YO00507 2555 aaPredicted RBP1.18□□□□□ -2.22
TRAJ17-201ENST00000390520 VPS13DQ5THJ4 4388 aa1.18□□□□□ -2.22
TRAJ17-201ENST00000390520 TENM4Q6N022 2769 aa1.18□□□□□ -2.22
TRAJ17-201ENST00000390520 M0QZ58 72 aa1.18□□□□□ -2.22
TRAJ17-201ENST00000390520 KRTAP10-4P60372 401 aaPredicted RBP1.18□□□□□ -2.22
TRAJ17-201ENST00000390520 APC2O95996 2303 aa1.17□□□□□ -2.22
TRAJ17-201ENST00000390520 NF1P21359 2839 aa1.17□□□□□ -2.22
TRAJ17-201ENST00000390520 PRKDCP78527 4128 aaKnown RBP1.17□□□□□ -2.22
TRAJ17-201ENST00000390520 RIF1Q5UIP0 2472 aaKnown RBP1.17□□□□□ -2.22
TRAJ17-201ENST00000390520 CHD8Q9HCK8 2581 aa1.17□□□□□ -2.22
TRAJ17-201ENST00000390520 CFAP54Q96N23 3096 aa1.17□□□□□ -2.22
TRAJ17-201ENST00000390520 FLNCQ14315 2725 aa1.16□□□□□ -2.22
TRAJ17-201ENST00000390520 DCHS2Q6V1P9 2916 aa1.16□□□□□ -2.22
TRAJ17-201ENST00000390520 HELZ2Q9BYK8 2649 aaKnown RBP1.16□□□□□ -2.22
TRAJ17-201ENST00000390520 ZFHX4Q86UP3 3567 aa1.15□□□□□ -2.23
TRAJ17-201ENST00000390520 NBEAQ8NFP9 2946 aa1.15□□□□□ -2.23
TRAJ17-201ENST00000390520 KRTAP21-3Q3LHN1 58 aa1.15□□□□□ -2.23
TRAJ17-201ENST00000390520 COL6A3P12111 3177 aa1.15□□□□□ -2.23
TRAJ17-201ENST00000390520 FRYLO94915 3013 aa1.15□□□□□ -2.23
TRAJ17-201ENST00000390520 ITPR3Q14573 2671 aa1.14□□□□□ -2.23
TRAJ17-201ENST00000390520 FAM186AA6NE01 2351 aa1.14□□□□□ -2.23
TRAJ17-201ENST00000390520 BSNQ9UPA5 3926 aa1.14□□□□□ -2.23
TRAJ17-201ENST00000390520 KRTAP12-3P60328 96 aa1.14□□□□□ -2.23
TRAJ17-201ENST00000390520 WDR87Q6ZQQ6 2873 aa1.14□□□□□ -2.23
TRAJ17-201ENST00000390520 LYSTQ99698 3801 aa1.14□□□□□ -2.23
TRAJ17-201ENST00000390520 COL12A1Q99715 3063 aa1.14□□□□□ -2.23
TRAJ17-201ENST00000390520 VPS13BQ7Z7G8 4022 aa1.13□□□□□ -2.23
TRAJ17-201ENST00000390520 RELNP78509 3460 aa1.13□□□□□ -2.23
TRAJ17-201ENST00000390520 ZZEF1O43149 2961 aa1.13□□□□□ -2.23
TRAJ17-201ENST00000390520 NCOR2Q9Y618 2525 aa1.13□□□□□ -2.23
TRAJ17-201ENST00000390520 UTP20O75691 2785 aaKnown RBP1.13□□□□□ -2.23
TRAJ17-201ENST00000390520 H3BUX3 64 aa1.13□□□□□ -2.23
TRAJ17-201ENST00000390520 APELAP0DMC3 54 aa1.13□□□□□ -2.23
TRAJ17-201ENST00000390520 KRTAP9-2Q9BYQ4 174 aa1.13□□□□□ -2.23
TRAJ17-201ENST00000390520 AKAP9Q99996 3911 aa1.12□□□□□ -2.23
TRAJ17-201ENST00000390520 GCN1Q92616 2671 aaKnown RBP1.12□□□□□ -2.23
TRAJ17-201ENST00000390520 KRTAP4-8Q9BYQ9 185 aa1.12□□□□□ -2.23
TRAJ17-201ENST00000390520 SPENQ96T58 3664 aaKnown RBP1.12□□□□□ -2.23
TRAJ17-201ENST00000390520 ATMQ13315 3056 aa1.12□□□□□ -2.23
TRAJ17-201ENST00000390520 MYCBP2O75592 4640 aa1.11□□□□□ -2.23
TRAJ17-201ENST00000390520 KMT2AQ03164 3969 aa1.11□□□□□ -2.23
TRAJ17-201ENST00000390520 TRIOO75962 3097 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms