RNA–Protein interactions for RNA: ENST00000381254.6

GEN1-202, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GEN1, Length 6,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-202ENST00000381254 CHTF8P0CG12 524 aa3.51□□□□□ -1.85
GEN1-202ENST00000381254 PHF5AQ7RTV0 110 aaKnown RBP3.51□□□□□ -1.85
GEN1-202ENST00000381254 RBM12B-AS1Q9P1G2 102 aa3.51□□□□□ -1.85
GEN1-202ENST00000381254 MIR22HGQ0VDD5 57 aa3.51□□□□□ -1.85
GEN1-202ENST00000381254 LAMA3Q16787 3333 aa3.51□□□□□ -1.85
GEN1-202ENST00000381254 MKI67P46013 3256 aaKnown RBP3.5□□□□□ -1.85
GEN1-202ENST00000381254 LAMA2P24043 3122 aaKnown RBP3.5□□□□□ -1.85
GEN1-202ENST00000381254 CFAP54Q96N23 3096 aa3.5□□□□□ -1.85
GEN1-202ENST00000381254 ITPR1Q14643 2758 aa3.5□□□□□ -1.85
GEN1-202ENST00000381254 SEC61BP60468 96 aaKnown RBP3.5□□□□□ -1.85
GEN1-202ENST00000381254 LINC00304Q8N9R0 145 aa3.49□□□□□ -1.85
GEN1-202ENST00000381254 UNC80Q8N2C7 3258 aa3.49□□□□□ -1.85
GEN1-202ENST00000381254 DSCR10P59022 87 aa3.48□□□□□ -1.85
GEN1-202ENST00000381254 SPACA4Q8TDM5 124 aa3.47□□□□□ -1.85
GEN1-202ENST00000381254 PLAC8Q9NZF1 115 aa3.47□□□□□ -1.85
GEN1-202ENST00000381254 KRTAP10-1P60331 282 aa3.47□□□□□ -1.85
GEN1-202ENST00000381254 KRTAP29-1A8MX34 341 aaPredicted RBP3.47□□□□□ -1.85
GEN1-202ENST00000381254 CRIPTQ9P021 101 aa3.47□□□□□ -1.85
GEN1-202ENST00000381254 KRTAP10-2P60368 255 aa3.46□□□□□ -1.86
GEN1-202ENST00000381254 DEFB116Q30KQ4 102 aa3.46□□□□□ -1.86
GEN1-202ENST00000381254 RPS29P62273 56 aaKnown RBP3.45□□□□□ -1.86
GEN1-202ENST00000381254 CENPEQ02224 2701 aa3.45□□□□□ -1.86
GEN1-202ENST00000381254 LINC00472Q9H8W2 130 aa3.45□□□□□ -1.86
GEN1-202ENST00000381254 FBN2P35556 2912 aa3.45□□□□□ -1.86
GEN1-202ENST00000381254 PRUNE2Q8WUY3 3088 aa3.44□□□□□ -1.86
GEN1-202ENST00000381254 MMP24-AS1A0A0U1RRL7 71 aa3.44□□□□□ -1.86
GEN1-202ENST00000381254 Q8N9P0 234 aaPredicted RBP3.44□□□□□ -1.86
GEN1-202ENST00000381254 Q96NJ1 140 aa3.44□□□□□ -1.86
GEN1-202ENST00000381254 DNAH12Q6ZR08 3092 aa3.44□□□□□ -1.86
GEN1-202ENST00000381254 Q5XG85 94 aa3.43□□□□□ -1.86
GEN1-202ENST00000381254 LINC00483Q53H64 154 aa3.43□□□□□ -1.86
GEN1-202ENST00000381254 H3BS24 57 aa3.43□□□□□ -1.86
GEN1-202ENST00000381254 DMAC1Q96GE9 116 aa3.42□□□□□ -1.86
GEN1-202ENST00000381254 EYSQ5T1H1 3165 aa3.41□□□□□ -1.86
GEN1-202ENST00000381254 KRTAP26-1Q6PEX3 210 aa3.41□□□□□ -1.86
GEN1-202ENST00000381254 ZCCHC13Q8WW36 166 aaKnown RBP3.41□□□□□ -1.86
GEN1-202ENST00000381254 A0A1W2PNN7 141 aa3.41□□□□□ -1.86
GEN1-202ENST00000381254 FAM168BA1KXE4 195 aa3.4□□□□□ -1.86
GEN1-202ENST00000381254 FP248Q71RG6 208 aaPredicted RBP3.4□□□□□ -1.87
GEN1-202ENST00000381254 KRTAP4-16G5E9R7 235 aaPredicted RBP3.4□□□□□ -1.87
GEN1-202ENST00000381254 FLNCQ14315 2725 aa3.39□□□□□ -1.87
GEN1-202ENST00000381254 NSD1Q96L73 2696 aaPredicted RBP3.39□□□□□ -1.87
GEN1-202ENST00000381254 Q6ZSA8 131 aa3.39□□□□□ -1.87
GEN1-202ENST00000381254 APCP25054 2843 aa3.38□□□□□ -1.87
GEN1-202ENST00000381254 MGAQ8IWI9 3026 aa3.38□□□□□ -1.87
GEN1-202ENST00000381254 A0A1B0GVY2 172 aa3.38□□□□□ -1.87
GEN1-202ENST00000381254 A0A1B0GU33 70 aa3.37□□□□□ -1.87
GEN1-202ENST00000381254 HRES1P13985 223 aa3.37□□□□□ -1.87
GEN1-202ENST00000381254 PRR26Q8N8Z3 221 aa3.36□□□□□ -1.87
GEN1-202ENST00000381254 C5orf42Q9H799 3197 aa3.36□□□□□ -1.87
GEN1-202ENST00000381254 REV3LO60673 3130 aa3.35□□□□□ -1.87
GEN1-202ENST00000381254 LINC01554Q52M75 96 aa3.35□□□□□ -1.87
GEN1-202ENST00000381254 BRCA2P51587 3418 aa3.34□□□□□ -1.88
GEN1-202ENST00000381254 Q5VV11 94 aa3.33□□□□□ -1.88
GEN1-202ENST00000381254 CSAG1Q6PB30 78 aa3.33□□□□□ -1.88
GEN1-202ENST00000381254 SPINT4Q6UDR6 99 aa3.33□□□□□ -1.88
GEN1-202ENST00000381254 DMXL1Q9Y485 3027 aa3.33□□□□□ -1.88
GEN1-202ENST00000381254 PANO1I0J062 215 aa3.32□□□□□ -1.88
GEN1-202ENST00000381254 Q5W150 140 aa3.32□□□□□ -1.88
GEN1-202ENST00000381254 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
GEN1-202ENST00000381254 SPATA8Q6RVD6 105 aa3.31□□□□□ -1.88
GEN1-202ENST00000381254 FRYQ5TBA9 3013 aa3.31□□□□□ -1.88
GEN1-202ENST00000381254 STAB2Q8WWQ8 2551 aa3.29□□□□□ -1.88
GEN1-202ENST00000381254 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.29□□□□□ -1.88
GEN1-202ENST00000381254 CYSTM1Q9H1C7 97 aa3.29□□□□□ -1.88
GEN1-202ENST00000381254 FRYLO94915 3013 aa3.29□□□□□ -1.88
GEN1-202ENST00000381254 MAP1AP78559 2803 aaPredicted RBP3.28□□□□□ -1.88
GEN1-202ENST00000381254 NOTCH2NLQ7Z3S9 236 aa3.28□□□□□ -1.88
GEN1-202ENST00000381254 Q8NDZ9 215 aa3.28□□□□□ -1.88
GEN1-202ENST00000381254 KRTAP1-5Q9BYS1 174 aa3.28□□□□□ -1.88
GEN1-202ENST00000381254 DMXL2Q8TDJ6 3036 aa3.28□□□□□ -1.88
GEN1-202ENST00000381254 CRYBG3Q68DQ2 2970 aa3.28□□□□□ -1.88
GEN1-202ENST00000381254 RPL37P61927 97 aaKnown RBP3.28□□□□□ -1.88
GEN1-202ENST00000381254 UTP20O75691 2785 aaKnown RBP3.28□□□□□ -1.88
GEN1-202ENST00000381254 PDZD2O15018 2839 aa3.27□□□□□ -1.89
GEN1-202ENST00000381254 OTOGQ6ZRI0 2925 aa3.27□□□□□ -1.89
GEN1-202ENST00000381254 KALRNO60229 2985 aa3.27□□□□□ -1.89
GEN1-202ENST00000381254 CFAP47Q6ZTR5 3102 aa3.25□□□□□ -1.89
GEN1-202ENST00000381254 NBEAQ8NFP9 2946 aa3.25□□□□□ -1.89
GEN1-202ENST00000381254 A0A0A0MQY5 61 aa3.25□□□□□ -1.89
GEN1-202ENST00000381254 KRTAP13-1Q8IUC0 172 aa3.25□□□□□ -1.89
GEN1-202ENST00000381254 Q6ZRN7 208 aaPredicted RBP3.24□□□□□ -1.89
GEN1-202ENST00000381254 CDH23Q9H251 3354 aa3.24□□□□□ -1.89
GEN1-202ENST00000381254 SPINK7P58062 85 aa3.24□□□□□ -1.89
GEN1-202ENST00000381254 WDFY4Q6ZS81 3184 aa3.23□□□□□ -1.89
GEN1-202ENST00000381254 C9orf92A6NGG3 77 aa3.23□□□□□ -1.89
GEN1-202ENST00000381254 NF1P21359 2839 aa3.23□□□□□ -1.89
GEN1-202ENST00000381254 ANAPC11Q9NYG5 84 aa3.23□□□□□ -1.89
GEN1-202ENST00000381254 M0QZ58 72 aa3.23□□□□□ -1.89
GEN1-202ENST00000381254 ROMO1P60602 79 aa3.23□□□□□ -1.89
GEN1-202ENST00000381254 H1FX-AS1Q4G0G2 97 aa3.22□□□□□ -1.89
GEN1-202ENST00000381254 USP34Q70CQ2 3546 aa3.22□□□□□ -1.89
GEN1-202ENST00000381254 DCHS1Q96JQ0 3298 aa3.22□□□□□ -1.89
GEN1-202ENST00000381254 S4R3F8 94 aa3.21□□□□□ -1.89
GEN1-202ENST00000381254 VCANP13611 3396 aa3.21□□□□□ -1.9
GEN1-202ENST00000381254 KRTAP17-1Q9BYP8 105 aa3.2□□□□□ -1.9
GEN1-202ENST00000381254 COL12A1Q99715 3063 aa3.2□□□□□ -1.9
GEN1-202ENST00000381254 TRIOO75962 3097 aa3.19□□□□□ -1.9
GEN1-202ENST00000381254 A6NN06 94 aa3.19□□□□□ -1.9
GEN1-202ENST00000381254 A0A0G2JQZ4 141 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms