RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 POLQO75417 2590 aa10.05□□□□□ -0.8
COL4A3BP-203ENST00000380494 KRTAP1-5Q9BYS1 174 aa10.04□□□□□ -0.8
COL4A3BP-203ENST00000380494 A8MU10 97 aa9.98□□□□□ -0.81
COL4A3BP-203ENST00000380494 ADM2Q7Z4H4 148 aa9.95□□□□□ -0.82
COL4A3BP-203ENST00000380494 BPTFQ12830 3046 aa9.95□□□□□ -0.82
COL4A3BP-203ENST00000380494 PANO1I0J062 215 aa9.94□□□□□ -0.82
COL4A3BP-203ENST00000380494 ACANP16112 2415 aa9.94□□□□□ -0.82
COL4A3BP-203ENST00000380494 M0QZ58 72 aa9.93□□□□□ -0.82
COL4A3BP-203ENST00000380494 M0R2T5 61 aa9.88□□□□□ -0.83
COL4A3BP-203ENST00000380494 NOTCH2NLQ7Z3S9 236 aa9.88□□□□□ -0.83
COL4A3BP-203ENST00000380494 SPTBN4Q9H254 2564 aa9.87□□□□□ -0.83
COL4A3BP-203ENST00000380494 SEC61BP60468 96 aaKnown RBP9.85□□□□□ -0.83
COL4A3BP-203ENST00000380494 RPS29P62273 56 aaKnown RBP9.84□□□□□ -0.83
COL4A3BP-203ENST00000380494 NDUFAF8A1L188 74 aa9.8□□□□□ -0.84
COL4A3BP-203ENST00000380494 KRTAP10-1P60331 282 aa9.8□□□□□ -0.84
COL4A3BP-203ENST00000380494 KRTAP7-1Q8IUC3 87 aa9.74□□□□□ -0.85
COL4A3BP-203ENST00000380494 KRTAP10-2P60368 255 aa9.73□□□□□ -0.85
COL4A3BP-203ENST00000380494 FASNP49327 2511 aaKnown RBP9.72□□□□□ -0.85
COL4A3BP-203ENST00000380494 PRRC2CQ9Y520 2896 aaKnown RBP9.72□□□□□ -0.85
COL4A3BP-203ENST00000380494 KRTAP11-1Q8IUC1 163 aa9.71□□□□□ -0.86
COL4A3BP-203ENST00000380494 KRTAP13-1Q8IUC0 172 aa9.7□□□□□ -0.86
COL4A3BP-203ENST00000380494 PLAC4Q8WY50 150 aa9.67□□□□□ -0.86
COL4A3BP-203ENST00000380494 Q5VSD8 79 aa9.65□□□□□ -0.86
COL4A3BP-203ENST00000380494 A8MUU9 505 aa9.61□□□□□ -0.87
COL4A3BP-203ENST00000380494 DNAH12Q6ZR08 3092 aa9.58□□□□□ -0.88
COL4A3BP-203ENST00000380494 EPG5Q9HCE0 2579 aa9.57□□□□□ -0.88
COL4A3BP-203ENST00000380494 Q6ZRN7 208 aaPredicted RBP9.57□□□□□ -0.88
COL4A3BP-203ENST00000380494 A0A0C4DFX4 3053 aa9.55□□□□□ -0.88
COL4A3BP-203ENST00000380494 FLNAP21333 2647 aaKnown RBP9.53□□□□□ -0.88
COL4A3BP-203ENST00000380494 C20orf166-AS1Q96NR2 134 aa9.52□□□□□ -0.89
COL4A3BP-203ENST00000380494 KRTAP13-2Q52LG2 175 aa9.51□□□□□ -0.89
COL4A3BP-203ENST00000380494 GOLGB1Q14789 3259 aaKnown RBP9.43□□□□□ -0.9
COL4A3BP-203ENST00000380494 ITPR3Q14573 2671 aa9.4□□□□□ -0.9
COL4A3BP-203ENST00000380494 USP24Q9UPU5 2620 aa9.37□□□□□ -0.91
COL4A3BP-203ENST00000380494 PP632Q6XCG6 107 aa9.36□□□□□ -0.91
COL4A3BP-203ENST00000380494 MGAM2Q2M2H8 2515 aa9.34□□□□□ -0.91
COL4A3BP-203ENST00000380494 TNP1P09430 55 aa9.33□□□□□ -0.92
COL4A3BP-203ENST00000380494 ATRQ13535 2644 aa9.33□□□□□ -0.92
COL4A3BP-203ENST00000380494 CHD7Q9P2D1 2997 aa9.29□□□□□ -0.92
COL4A3BP-203ENST00000380494 H0YAA0 97 aa9.28□□□□□ -0.92
COL4A3BP-203ENST00000380494 HECTD1Q9ULT8 2610 aa9.28□□□□□ -0.92
COL4A3BP-203ENST00000380494 C10orf95Q9H7T3 257 aa9.27□□□□□ -0.93
COL4A3BP-203ENST00000380494 DMBT1Q9UGM3 2413 aaPredicted RBP9.25□□□□□ -0.93
COL4A3BP-203ENST00000380494 FLG2Q5D862 2391 aaPredicted RBP9.21□□□□□ -0.94
COL4A3BP-203ENST00000380494 CHD9Q3L8U1 2897 aa9.19□□□□□ -0.94
COL4A3BP-203ENST00000380494 P0C880 135 aa9.19□□□□□ -0.94
COL4A3BP-203ENST00000380494 UNC79Q9P2D8 2635 aa9.18□□□□□ -0.94
COL4A3BP-203ENST00000380494 C5orf42Q9H799 3197 aa9.18□□□□□ -0.94
COL4A3BP-203ENST00000380494 AKAP13Q12802 2813 aa9.15□□□□□ -0.94
COL4A3BP-203ENST00000380494 GCN1Q92616 2671 aaKnown RBP9.13□□□□□ -0.95
COL4A3BP-203ENST00000380494 CENPEQ02224 2701 aa9.12□□□□□ -0.95
COL4A3BP-203ENST00000380494 NBEAL1Q6ZS30 2694 aa9.12□□□□□ -0.95
COL4A3BP-203ENST00000380494 CEP350Q5VT06 3117 aa9.11□□□□□ -0.95
COL4A3BP-203ENST00000380494 CHD6Q8TD26 2715 aa9.1□□□□□ -0.95
COL4A3BP-203ENST00000380494 MAST4O15021 2626 aa9.09□□□□□ -0.95
COL4A3BP-203ENST00000380494 CFAP54Q96N23 3096 aa9.08□□□□□ -0.96
COL4A3BP-203ENST00000380494 KRTAP1-4P0C5Y4 121 aa9.02□□□□□ -0.97
COL4A3BP-203ENST00000380494 TRANK1O15050 2925 aa9□□□□□ -0.97
COL4A3BP-203ENST00000380494 UTRNP46939 3433 aa9□□□□□ -0.97
COL4A3BP-203ENST00000380494 HELZ2Q9BYK8 2649 aaKnown RBP8.98□□□□□ -0.97
COL4A3BP-203ENST00000380494 XP32Q5T750 250 aa8.93□□□□□ -0.98
COL4A3BP-203ENST00000380494 CFAP46Q8IYW2 2715 aa8.93□□□□□ -0.98
COL4A3BP-203ENST00000380494 NOTCH1P46531 2555 aa8.91□□□□□ -0.98
COL4A3BP-203ENST00000380494 KRTAP13-3Q3SY46 172 aa8.91□□□□□ -0.98
COL4A3BP-203ENST00000380494 NBEAL2Q6ZNJ1 2754 aa8.91□□□□□ -0.98
COL4A3BP-203ENST00000380494 FLNBO75369 2602 aaKnown RBP8.89□□□□□ -0.99
COL4A3BP-203ENST00000380494 HTTP42858 3142 aa8.88□□□□□ -0.99
COL4A3BP-203ENST00000380494 ITPR1Q14643 2758 aa8.86□□□□□ -0.99
COL4A3BP-203ENST00000380494 KRTAP10-8P60410 259 aa8.85□□□□□ -0.99
COL4A3BP-203ENST00000380494 MGAQ8IWI9 3026 aa8.84□□□□□ -0.99
COL4A3BP-203ENST00000380494 PCNTO95613 3336 aa8.82□□□□□ -1
COL4A3BP-203ENST00000380494 TEP1Q99973 2627 aaKnown RBP8.8□□□□□ -1
COL4A3BP-203ENST00000380494 STAB1Q9NY15 2570 aa8.79□□□□□ -1
COL4A3BP-203ENST00000380494 SETXQ7Z333 2677 aaKnown RBP8.77□□□□□ -1.01
COL4A3BP-203ENST00000380494 TEX15Q9BXT5 2789 aa8.77□□□□□ -1.01
COL4A3BP-203ENST00000380494 STAB2Q8WWQ8 2551 aa8.77□□□□□ -1.01
COL4A3BP-203ENST00000380494 ZNF292O60281 2723 aa8.75□□□□□ -1.01
COL4A3BP-203ENST00000380494 BAHCC1Q9P281 2608 aa8.75□□□□□ -1.01
COL4A3BP-203ENST00000380494 COL6A5A8TX70 2615 aa8.73□□□□□ -1.01
COL4A3BP-203ENST00000380494 TPRXLQ17RH7 258 aa8.72□□□□□ -1.01
COL4A3BP-203ENST00000380494 KMT2BQ9UMN6 2715 aaPredicted RBP8.71□□□□□ -1.02
COL4A3BP-203ENST00000380494 FRYQ5TBA9 3013 aa8.69□□□□□ -1.02
COL4A3BP-203ENST00000380494 KRTAP21-3Q3LHN1 58 aa8.66□□□□□ -1.02
COL4A3BP-203ENST00000380494 LAMA2P24043 3122 aaKnown RBP8.65□□□□□ -1.02
COL4A3BP-203ENST00000380494 TRIOO75962 3097 aa8.65□□□□□ -1.03
COL4A3BP-203ENST00000380494 NSD1Q96L73 2696 aaPredicted RBP8.63□□□□□ -1.03
COL4A3BP-203ENST00000380494 FREM2Q5SZK8 3169 aa8.63□□□□□ -1.03
COL4A3BP-203ENST00000380494 MKI67P46013 3256 aaKnown RBP8.63□□□□□ -1.03
COL4A3BP-203ENST00000380494 KRTAP12-2P59991 146 aa8.62□□□□□ -1.03
COL4A3BP-203ENST00000380494 NBEAQ8NFP9 2946 aa8.62□□□□□ -1.03
COL4A3BP-203ENST00000380494 KALRNO60229 2985 aa8.6□□□□□ -1.03
COL4A3BP-203ENST00000380494 MAP1AP78559 2803 aaPredicted RBP8.56□□□□□ -1.04
COL4A3BP-203ENST00000380494 APCP25054 2843 aa8.55□□□□□ -1.04
COL4A3BP-203ENST00000380494 KRTAP13-4Q3LI77 160 aa8.53□□□□□ -1.04
COL4A3BP-203ENST00000380494 A0A1B0GVY2 172 aa8.53□□□□□ -1.04
COL4A3BP-203ENST00000380494 DSPP15924 2871 aaKnown RBP8.52□□□□□ -1.05
COL4A3BP-203ENST00000380494 IGSF10Q6WRI0 2623 aa8.52□□□□□ -1.05
COL4A3BP-203ENST00000380494 PRO2289Q9P1D8 64 aa8.5□□□□□ -1.05
COL4A3BP-203ENST00000380494 ITPR2Q14571 2701 aa8.49□□□□□ -1.05
COL4A3BP-203ENST00000380494 UBR5O95071 2799 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms