RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 DNAH11Q96DT5 4516 aa12.16□□□□□ -0.46
PDLIM5-205ENST00000380180 HAMPP81172 84 aa12.16□□□□□ -0.46
PDLIM5-205ENST00000380180 DNAH8Q96JB1 4490 aa12.15□□□□□ -0.46
PDLIM5-205ENST00000380180 FAM236AA0A1B0GUQ0 79 aa12.15□□□□□ -0.47
PDLIM5-205ENST00000380180 FAM236BA0A1B0GV22 79 aa12.15□□□□□ -0.47
PDLIM5-205ENST00000380180 DNAH5Q8TE73 4624 aa12.14□□□□□ -0.47
PDLIM5-205ENST00000380180 Q8NBF4 154 aa12.14□□□□□ -0.47
PDLIM5-205ENST00000380180 PKD1P98161 4303 aa12.14□□□□□ -0.47
PDLIM5-205ENST00000380180 IGLV8-61A0A075B6I0 122 aa12.13□□□□□ -0.47
PDLIM5-205ENST00000380180 A0A0G2JQZ4 141 aa12.13□□□□□ -0.47
PDLIM5-205ENST00000380180 CIRBP-AS1Q8TBR5 109 aa12.13□□□□□ -0.47
PDLIM5-205ENST00000380180 FAT2Q9NYQ8 4349 aa12.13□□□□□ -0.47
PDLIM5-205ENST00000380180 HIST1H4AP62805 103 aaKnown RBP12.12□□□□□ -0.47
PDLIM5-205ENST00000380180 IGFL1Q6UW32 110 aa12.12□□□□□ -0.47
PDLIM5-205ENST00000380180 ANAPC13Q9BS18 74 aa12.12□□□□□ -0.47
PDLIM5-205ENST00000380180 A0A087WVE0 104 aa12.11□□□□□ -0.47
PDLIM5-205ENST00000380180 KRTAP10-1P60331 282 aa12.11□□□□□ -0.47
PDLIM5-205ENST00000380180 A0A1B0GW54 56 aa12.11□□□□□ -0.47
PDLIM5-205ENST00000380180 SPRR4Q96PI1 79 aa12.11□□□□□ -0.47
PDLIM5-205ENST00000380180 NREPQ16612 68 aa12.1□□□□□ -0.47
PDLIM5-205ENST00000380180 LCE6AA0A183 80 aa12.08□□□□□ -0.48
PDLIM5-205ENST00000380180 CXCL6P80162 114 aa12.08□□□□□ -0.48
PDLIM5-205ENST00000380180 Q6ZSA8 131 aa12.08□□□□□ -0.48
PDLIM5-205ENST00000380180 ZNF861PO60384 105 aa12.08□□□□□ -0.48
PDLIM5-205ENST00000380180 SCXQ7RTU7 201 aa12.07□□□□□ -0.48
PDLIM5-205ENST00000380180 CRYGAP11844 174 aa12.06□□□□□ -0.48
PDLIM5-205ENST00000380180 SACSQ9NZJ4 4579 aa12.04□□□□□ -0.48
PDLIM5-205ENST00000380180 IGLV7-43P04211 117 aa12.03□□□□□ -0.48
PDLIM5-205ENST00000380180 LINC00483Q53H64 154 aa12.02□□□□□ -0.49
PDLIM5-205ENST00000380180 ZNF706Q9Y5V0 76 aaPredicted RBP12.01□□□□□ -0.49
PDLIM5-205ENST00000380180 BPY2O14599 106 aa11.98□□□□□ -0.49
PDLIM5-205ENST00000380180 IGLV9-49A0A0B4J1Y8 123 aa11.98□□□□□ -0.49
PDLIM5-205ENST00000380180 LINC00336Q6ZUF6 198 aa11.96□□□□□ -0.49
PDLIM5-205ENST00000380180 ANAPC11Q9NYG5 84 aa11.96□□□□□ -0.5
PDLIM5-205ENST00000380180 A0A087WSZ3 146 aa11.95□□□□□ -0.5
PDLIM5-205ENST00000380180 ATOX1O00244 68 aa11.95□□□□□ -0.5
PDLIM5-205ENST00000380180 C9orf153Q5TBE3 101 aa11.94□□□□□ -0.5
PDLIM5-205ENST00000380180 Q8N9L7 120 aa11.94□□□□□ -0.5
PDLIM5-205ENST00000380180 CCDC179H3BU77 68 aa11.9□□□□□ -0.5
PDLIM5-205ENST00000380180 IGKV4-1P06312 121 aa11.9□□□□□ -0.5
PDLIM5-205ENST00000380180 RPL37AP61513 92 aaKnown RBP11.87□□□□□ -0.51
PDLIM5-205ENST00000380180 MOBPQ13875 183 aa11.87□□□□□ -0.51
PDLIM5-205ENST00000380180 PKHD1P08F94 4074 aa11.86□□□□□ -0.51
PDLIM5-205ENST00000380180 LRP1BQ9NZR2 4599 aa11.86□□□□□ -0.51
PDLIM5-205ENST00000380180 A0A1B0GVY2 172 aa11.86□□□□□ -0.51
PDLIM5-205ENST00000380180 DSCR10P59022 87 aa11.86□□□□□ -0.51
PDLIM5-205ENST00000380180 DEFB116Q30KQ4 102 aa11.85□□□□□ -0.51
PDLIM5-205ENST00000380180 COX7CP15954 63 aa11.82□□□□□ -0.52
PDLIM5-205ENST00000380180 SERP2Q8N6R1 65 aa11.81□□□□□ -0.52
PDLIM5-205ENST00000380180 HRCT1Q6UXD1 115 aa11.81□□□□□ -0.52
PDLIM5-205ENST00000380180 UQCRQO14949 82 aa11.8□□□□□ -0.52
PDLIM5-205ENST00000380180 K7EQZ3 153 aa11.79□□□□□ -0.52
PDLIM5-205ENST00000380180 RYR2Q92736 4967 aa11.78□□□□□ -0.52
PDLIM5-205ENST00000380180 LINC00472Q9H8W2 130 aa11.78□□□□□ -0.52
PDLIM5-205ENST00000380180 KMT2CQ8NEZ4 4911 aaKnown RBP11.76□□□□□ -0.53
PDLIM5-205ENST00000380180 VPS13BQ7Z7G8 4022 aa11.76□□□□□ -0.53
PDLIM5-205ENST00000380180 A0A087X002 238 aa11.71□□□□□ -0.53
PDLIM5-205ENST00000380180 TRAV7A0A075B6U4 112 aa11.7□□□□□ -0.54
PDLIM5-205ENST00000380180 SSBP3-AS1Q7Z2R9 100 aa11.7□□□□□ -0.54
PDLIM5-205ENST00000380180 SMIM20Q8N5G0 67 aa11.7□□□□□ -0.54
PDLIM5-205ENST00000380180 DYNC1H1Q14204 4646 aaKnown RBP11.69□□□□□ -0.54
PDLIM5-205ENST00000380180 Q96NJ1 140 aa11.69□□□□□ -0.54
PDLIM5-205ENST00000380180 SS18L2Q9UHA2 77 aa11.69□□□□□ -0.54
PDLIM5-205ENST00000380180 SMR3BP02814 79 aaPredicted RBP11.68□□□□□ -0.54
PDLIM5-205ENST00000380180 KRTAP1-4P0C5Y4 121 aa11.67□□□□□ -0.54
PDLIM5-205ENST00000380180 FAM229BQ4G0N7 80 aa11.67□□□□□ -0.54
PDLIM5-205ENST00000380180 KRTAP13-2Q52LG2 175 aa11.67□□□□□ -0.54
PDLIM5-205ENST00000380180 A8MWP4 228 aa11.66□□□□□ -0.54
PDLIM5-205ENST00000380180 HCG22E2RYF7 251 aa11.65□□□□□ -0.54
PDLIM5-205ENST00000380180 J3KT08 172 aa11.65□□□□□ -0.54
PDLIM5-205ENST00000380180 PRR15Q8IV56 129 aa11.65□□□□□ -0.54
PDLIM5-205ENST00000380180 CD164Q04900 197 aa11.64□□□□□ -0.55
PDLIM5-205ENST00000380180 OCR1Q9BZK8 76 aa11.62□□□□□ -0.55
PDLIM5-205ENST00000380180 SPINK6Q6UWN8 80 aa11.6□□□□□ -0.55
PDLIM5-205ENST00000380180 PLA2G1BP04054 148 aaKnown RBP11.6□□□□□ -0.55
PDLIM5-205ENST00000380180 CYSTM1Q9H1C7 97 aa11.6□□□□□ -0.55
PDLIM5-205ENST00000380180 WFDC13Q8IUB5 93 aa11.59□□□□□ -0.55
PDLIM5-205ENST00000380180 C20orf197Q8N268 126 aa11.59□□□□□ -0.55
PDLIM5-205ENST00000380180 NDUFB1O75438 58 aa11.57□□□□□ -0.56
PDLIM5-205ENST00000380180 APOBP04114 4563 aaKnown RBP11.56□□□□□ -0.56
PDLIM5-205ENST00000380180 KRTAP29-1A8MX34 341 aaPredicted RBP11.55□□□□□ -0.56
PDLIM5-205ENST00000380180 KRTAP10-4P60372 401 aaPredicted RBP11.53□□□□□ -0.56
PDLIM5-205ENST00000380180 CASC2Q6XLA1 102 aa11.53□□□□□ -0.56
PDLIM5-205ENST00000380180 MMP24-AS1A0A0U1RRL7 71 aa11.5□□□□□ -0.57
PDLIM5-205ENST00000380180 TYMSOSQ8TAI1 123 aa11.5□□□□□ -0.57
PDLIM5-205ENST00000380180 CDK2AP2O75956 126 aa11.49□□□□□ -0.57
PDLIM5-205ENST00000380180 ASB16-AS1Q495Z4 193 aa11.49□□□□□ -0.57
PDLIM5-205ENST00000380180 SNURFQ9Y675 71 aa11.49□□□□□ -0.57
PDLIM5-205ENST00000380180 A0A1B0GVX0 72 aa11.48□□□□□ -0.57
PDLIM5-205ENST00000380180 KLKP1Q107X0 134 aa11.48□□□□□ -0.57
PDLIM5-205ENST00000380180 IGHV6-1A0A0B4J1U7 121 aa11.47□□□□□ -0.57
PDLIM5-205ENST00000380180 TMEM254Q8TBM7 123 aa11.47□□□□□ -0.57
PDLIM5-205ENST00000380180 RYR3Q15413 4870 aa11.45□□□□□ -0.58
PDLIM5-205ENST00000380180 Q5XG85 94 aa11.45□□□□□ -0.58
PDLIM5-205ENST00000380180 PRR26Q8N8Z3 221 aa11.45□□□□□ -0.58
PDLIM5-205ENST00000380180 C8orf17Q9NRJ1 99 aa11.45□□□□□ -0.58
PDLIM5-205ENST00000380180 FAT1Q14517 4588 aa11.45□□□□□ -0.58
PDLIM5-205ENST00000380180 hDV103S1A0JD37 113 aa11.45□□□□□ -0.58
PDLIM5-205ENST00000380180 C4orf48Q5BLP8 95 aa11.42□□□□□ -0.58
PDLIM5-205ENST00000380180 A0A0U1RQV1 116 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms