RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 ATP5EP2Q5VTU8 51 aa5.06□□□□□ -1.6
PDLIM5-204ENST00000380176 A0A1W2PNN7 141 aa5.06□□□□□ -1.6
PDLIM5-204ENST00000380176 CNBPP62633 177 aaKnown RBP5.05□□□□□ -1.6
PDLIM5-204ENST00000380176 DHRS4-AS1Q9P1J3 65 aa5.05□□□□□ -1.6
PDLIM5-204ENST00000380176 C16orf90A8MZG2 172 aa5.05□□□□□ -1.6
PDLIM5-204ENST00000380176 SCXQ7RTU7 201 aa5.05□□□□□ -1.6
PDLIM5-204ENST00000380176 ATP5EP56381 51 aaPredicted RBP5.04□□□□□ -1.6
PDLIM5-204ENST00000380176 CHTF8P0CG12 524 aa5.04□□□□□ -1.6
PDLIM5-204ENST00000380176 REG3GQ6UW15 175 aa5.04□□□□□ -1.6
PDLIM5-204ENST00000380176 VPS13DQ5THJ4 4388 aa5.03□□□□□ -1.6
PDLIM5-204ENST00000380176 IGLV5-48A0A075B6I7 105 aa5.03□□□□□ -1.6
PDLIM5-204ENST00000380176 UBE2BP63146 152 aa5.03□□□□□ -1.6
PDLIM5-204ENST00000380176 KMT2AQ03164 3969 aa5.03□□□□□ -1.6
PDLIM5-204ENST00000380176 SRRM2Q9UQ35 2752 aaKnown RBP5.03□□□□□ -1.6
PDLIM5-204ENST00000380176 KRTAP11-1Q8IUC1 163 aa5.03□□□□□ -1.6
PDLIM5-204ENST00000380176 LRCOL1A6NCL2 159 aa5.02□□□□□ -1.61
PDLIM5-204ENST00000380176 C3orf84H3BNL1 204 aa5.02□□□□□ -1.61
PDLIM5-204ENST00000380176 DNHD1Q96M86 4753 aa5.02□□□□□ -1.61
PDLIM5-204ENST00000380176 MEGF8Q7Z7M0 2845 aa5.02□□□□□ -1.61
PDLIM5-204ENST00000380176 NBDYA0A0U1RRE5 68 aa5.02□□□□□ -1.61
PDLIM5-204ENST00000380176 PRLHP81277 87 aa5.02□□□□□ -1.61
PDLIM5-204ENST00000380176 NDUFS5O43920 106 aa5.01□□□□□ -1.61
PDLIM5-204ENST00000380176 CXCL6P80162 114 aa5.01□□□□□ -1.61
PDLIM5-204ENST00000380176 WWC2-AS2Q96NR7 200 aa5.01□□□□□ -1.61
PDLIM5-204ENST00000380176 NUPR2A6NF83 97 aa5□□□□□ -1.61
PDLIM5-204ENST00000380176 Q6ZRN7 208 aaPredicted RBP5□□□□□ -1.61
PDLIM5-204ENST00000380176 PHF5AQ7RTV0 110 aaKnown RBP5□□□□□ -1.61
PDLIM5-204ENST00000380176 DNAH2Q9P225 4427 aa5□□□□□ -1.61
PDLIM5-204ENST00000380176 A0A1W2PNM2 257 aa5□□□□□ -1.61
PDLIM5-204ENST00000380176 Q8N9L7 120 aa5□□□□□ -1.61
PDLIM5-204ENST00000380176 PANO1I0J062 215 aa5□□□□□ -1.61
PDLIM5-204ENST00000380176 SMIM29Q86T20 159 aa5□□□□□ -1.61
PDLIM5-204ENST00000380176 A0A0G2JQZ4 141 aa4.99□□□□□ -1.61
PDLIM5-204ENST00000380176 C1orf137Q5JT78 98 aa4.99□□□□□ -1.61
PDLIM5-204ENST00000380176 C9orf163Q8N9P6 203 aa4.99□□□□□ -1.61
PDLIM5-204ENST00000380176 C14orf177Q52M58 125 aa4.99□□□□□ -1.61
PDLIM5-204ENST00000380176 H7BZZ5 65 aa4.98□□□□□ -1.61
PDLIM5-204ENST00000380176 FUSP35637 526 aaKnown RBP eCLIP4.98□□□□□ -1.61
PDLIM5-204ENST00000380176 NREPQ16612 68 aa4.98□□□□□ -1.61
PDLIM5-204ENST00000380176 HIGD2AQ9BW72 106 aa4.98□□□□□ -1.61
PDLIM5-204ENST00000380176 LINC00474Q9P2X8 69 aa4.97□□□□□ -1.61
PDLIM5-204ENST00000380176 HECTD4Q9Y4D8 3996 aa4.96□□□□□ -1.61
PDLIM5-204ENST00000380176 BPY2O14599 106 aa4.96□□□□□ -1.61
PDLIM5-204ENST00000380176 BCE1O60756 84 aa4.96□□□□□ -1.62
PDLIM5-204ENST00000380176 Q8NBF4 154 aa4.96□□□□□ -1.62
PDLIM5-204ENST00000380176 LINC00476Q8WZB0 136 aa4.95□□□□□ -1.62
PDLIM5-204ENST00000380176 TGP01266 2768 aa4.95□□□□□ -1.62
PDLIM5-204ENST00000380176 IGKV4-1P06312 121 aa4.95□□□□□ -1.62
PDLIM5-204ENST00000380176 SPRR4Q96PI1 79 aa4.95□□□□□ -1.62
PDLIM5-204ENST00000380176 KRTAP23-1A1A580 65 aa4.94□□□□□ -1.62
PDLIM5-204ENST00000380176 NDUFC1O43677 76 aa4.94□□□□□ -1.62
PDLIM5-204ENST00000380176 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.94□□□□□ -1.62
PDLIM5-204ENST00000380176 KLKP1Q107X0 134 aa4.94□□□□□ -1.62
PDLIM5-204ENST00000380176 IGFL1Q6UW32 110 aa4.94□□□□□ -1.62
PDLIM5-204ENST00000380176 C20orf197Q8N268 126 aa4.93□□□□□ -1.62
PDLIM5-204ENST00000380176 FBN3Q75N90 2809 aa4.93□□□□□ -1.62
PDLIM5-204ENST00000380176 FRAS1Q86XX4 4008 aa4.93□□□□□ -1.62
PDLIM5-204ENST00000380176 DNAH17Q9UFH2 4485 aa4.93□□□□□ -1.62
PDLIM5-204ENST00000380176 TRAV7A0A075B6U4 112 aa4.93□□□□□ -1.62
PDLIM5-204ENST00000380176 A0A087WTM6 91 aa4.93□□□□□ -1.62
PDLIM5-204ENST00000380176 F8WEM9 126 aa4.92□□□□□ -1.62
PDLIM5-204ENST00000380176 LCA10Q71F78 164 aa4.92□□□□□ -1.62
PDLIM5-204ENST00000380176 DNAH8Q96JB1 4490 aa4.92□□□□□ -1.62
PDLIM5-204ENST00000380176 A0A1B0GW54 56 aa4.92□□□□□ -1.62
PDLIM5-204ENST00000380176 A8MUN3 132 aa4.91□□□□□ -1.62
PDLIM5-204ENST00000380176 IGLV9-49A0A0B4J1Y8 123 aa4.91□□□□□ -1.62
PDLIM5-204ENST00000380176 H0Y9J4 135 aa4.91□□□□□ -1.62
PDLIM5-204ENST00000380176 UBE2AP49459 152 aa4.91□□□□□ -1.62
PDLIM5-204ENST00000380176 SPACA4Q8TDM5 124 aa4.91□□□□□ -1.62
PDLIM5-204ENST00000380176 Q6ZR54 194 aa4.91□□□□□ -1.62
PDLIM5-204ENST00000380176 IGLV8-61A0A075B6I0 122 aa4.9□□□□□ -1.62
PDLIM5-204ENST00000380176 DSCR10P59022 87 aa4.9□□□□□ -1.62
PDLIM5-204ENST00000380176 DEFB116Q30KQ4 102 aa4.9□□□□□ -1.63
PDLIM5-204ENST00000380176 SNURFQ9Y675 71 aa4.9□□□□□ -1.63
PDLIM5-204ENST00000380176 Q1T7F1 81 aa4.89□□□□□ -1.63
PDLIM5-204ENST00000380176 KRTAP13-1Q8IUC0 172 aa4.89□□□□□ -1.63
PDLIM5-204ENST00000380176 DNAH6Q9C0G6 4158 aa4.89□□□□□ -1.63
PDLIM5-204ENST00000380176 A0A087WSZ3 146 aa4.88□□□□□ -1.63
PDLIM5-204ENST00000380176 K7EQZ3 153 aa4.88□□□□□ -1.63
PDLIM5-204ENST00000380176 RTL8CO15255 209 aa4.88□□□□□ -1.63
PDLIM5-204ENST00000380176 SPRR1BP22528 89 aa4.88□□□□□ -1.63
PDLIM5-204ENST00000380176 OCR1Q9BZK8 76 aa4.87□□□□□ -1.63
PDLIM5-204ENST00000380176 CDK2AP2O75956 126 aa4.87□□□□□ -1.63
PDLIM5-204ENST00000380176 MPLKIPQ8TAP9 179 aa4.86□□□□□ -1.63
PDLIM5-204ENST00000380176 C7orf65Q6ZTY9 151 aa4.86□□□□□ -1.63
PDLIM5-204ENST00000380176 DNAH5Q8TE73 4624 aa4.85□□□□□ -1.63
PDLIM5-204ENST00000380176 LY6G6CO95867 125 aa4.85□□□□□ -1.63
PDLIM5-204ENST00000380176 RPL37AP61513 92 aaKnown RBP4.85□□□□□ -1.63
PDLIM5-204ENST00000380176 FAM229BQ4G0N7 80 aa4.84□□□□□ -1.63
PDLIM5-204ENST00000380176 C1orf134Q5TEV5 83 aa4.84□□□□□ -1.63
PDLIM5-204ENST00000380176 PSORS1C2Q9UIG4 136 aa4.84□□□□□ -1.63
PDLIM5-204ENST00000380176 TMEM254Q8TBM7 123 aa4.83□□□□□ -1.64
PDLIM5-204ENST00000380176 DNAH11Q96DT5 4516 aa4.83□□□□□ -1.64
PDLIM5-204ENST00000380176 HYDINQ4G0P3 5121 aa4.83□□□□□ -1.64
PDLIM5-204ENST00000380176 IGLV5-52A0A0A0MRZ9 124 aa4.83□□□□□ -1.64
PDLIM5-204ENST00000380176 A6NN06 94 aa4.83□□□□□ -1.64
PDLIM5-204ENST00000380176 LINC00313P59037 77 aa4.83□□□□□ -1.64
PDLIM5-204ENST00000380176 ATP11AUNQ6ZP68 121 aa4.83□□□□□ -1.64
PDLIM5-204ENST00000380176 PLAC8Q9NZF1 115 aa4.83□□□□□ -1.64
PDLIM5-204ENST00000380176 ALMS1Q8TCU4 4167 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 208 ms