RNA–Protein interactions for RNA: ENST00000377877.4

RNF38-205, Transcript of ring finger protein 38, humanhuman

TSL 2 BASIC

Gene RNF38, Length 1,974 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-205ENST00000377877 SPRR1AP35321 89 aa13.12□□□□□ -0.31
RNF38-205ENST00000377877 ELOF1P60002 83 aaKnown RBP13.12□□□□□ -0.31
RNF38-205ENST00000377877 UBE2BP63146 152 aa13.12□□□□□ -0.31
RNF38-205ENST00000377877 HAMPP81172 84 aa13.12□□□□□ -0.31
RNF38-205ENST00000377877 CIRBP-AS1Q8TBR5 109 aa13.12□□□□□ -0.31
RNF38-205ENST00000377877 REG3GQ6UW15 175 aa13.11□□□□□ -0.31
RNF38-205ENST00000377877 SVIPQ8NHG7 77 aa13.09□□□□□ -0.31
RNF38-205ENST00000377877 SCXQ7RTU7 201 aa13.09□□□□□ -0.31
RNF38-205ENST00000377877 FAM19A1Q7Z5A9 133 aa13.07□□□□□ -0.32
RNF38-205ENST00000377877 LINC00528Q8N1L1 170 aa13.07□□□□□ -0.32
RNF38-205ENST00000377877 ETDCA0A1B0GVM5 59 aa13.05□□□□□ -0.32
RNF38-205ENST00000377877 TRBV7-4A0A0J9YYF1 115 aa13.04□□□□□ -0.32
RNF38-205ENST00000377877 Q6ZVQ6 151 aa13.04□□□□□ -0.32
RNF38-205ENST00000377877 BCE1O60756 84 aa13.02□□□□□ -0.32
RNF38-205ENST00000377877 LINC01547P58512 204 aaPredicted RBP13.02□□□□□ -0.32
RNF38-205ENST00000377877 TMEM258P61165 79 aa13.02□□□□□ -0.32
RNF38-205ENST00000377877 Q6ZRX8 168 aa13.02□□□□□ -0.32
RNF38-205ENST00000377877 Q9BRP9 147 aa13.02□□□□□ -0.32
RNF38-205ENST00000377877 SRRM2Q9UQ35 2752 aaKnown RBP13.01□□□□□ -0.33
RNF38-205ENST00000377877 CXCL6P80162 114 aa13.01□□□□□ -0.33
RNF38-205ENST00000377877 PRLHP81277 87 aa13□□□□□ -0.33
RNF38-205ENST00000377877 PSORS1C2Q9UIG4 136 aa13□□□□□ -0.33
RNF38-205ENST00000377877 J3KT08 172 aa12.99□□□□□ -0.33
RNF38-205ENST00000377877 CYSTM1Q9H1C7 97 aa12.98□□□□□ -0.33
RNF38-205ENST00000377877 ERC2-IT1O76042 136 aa12.96□□□□□ -0.33
RNF38-205ENST00000377877 APOBP04114 4563 aaKnown RBP12.95□□□□□ -0.34
RNF38-205ENST00000377877 RPS28P62857 69 aaKnown RBP12.94□□□□□ -0.34
RNF38-205ENST00000377877 C1orf137Q5JT78 98 aa12.93□□□□□ -0.34
RNF38-205ENST00000377877 DHRS4-AS1Q9P1J3 65 aa12.93□□□□□ -0.34
RNF38-205ENST00000377877 TRAV7A0A075B6U4 112 aa12.92□□□□□ -0.34
RNF38-205ENST00000377877 KRTAP13-1Q8IUC0 172 aa12.92□□□□□ -0.34
RNF38-205ENST00000377877 UBE2AP49459 152 aa12.91□□□□□ -0.34
RNF38-205ENST00000377877 HIGD2AQ9BW72 106 aa12.9□□□□□ -0.34
RNF38-205ENST00000377877 H0Y9J4 135 aa12.9□□□□□ -0.34
RNF38-205ENST00000377877 ST20-AS1Q8NBB2 130 aa12.9□□□□□ -0.34
RNF38-205ENST00000377877 VPS13BQ7Z7G8 4022 aa12.87□□□□□ -0.35
RNF38-205ENST00000377877 DEFB105AQ8NG35 78 aa12.86□□□□□ -0.35
RNF38-205ENST00000377877 C20orf197Q8N268 126 aa12.85□□□□□ -0.35
RNF38-205ENST00000377877 SMR3BP02814 79 aaPredicted RBP12.84□□□□□ -0.35
RNF38-205ENST00000377877 IGLV7-43P04211 117 aa12.83□□□□□ -0.36
RNF38-205ENST00000377877 EPPK1P58107 5090 aaKnown RBP12.83□□□□□ -0.36
RNF38-205ENST00000377877 Q8N377 158 aa12.82□□□□□ -0.36
RNF38-205ENST00000377877 ZNF861PO60384 105 aa12.81□□□□□ -0.36
RNF38-205ENST00000377877 FAT1Q14517 4588 aa12.8□□□□□ -0.36
RNF38-205ENST00000377877 IGLV5-48A0A075B6I7 105 aa12.78□□□□□ -0.36
RNF38-205ENST00000377877 NREPQ16612 68 aa12.77□□□□□ -0.37
RNF38-205ENST00000377877 KLKP1Q107X0 134 aa12.76□□□□□ -0.37
RNF38-205ENST00000377877 A0A1B0GW54 56 aa12.76□□□□□ -0.37
RNF38-205ENST00000377877 FAM236DA0A1B0GTK5 79 aa12.73□□□□□ -0.37
RNF38-205ENST00000377877 FAM236CP0DP71 79 aa12.73□□□□□ -0.37
RNF38-205ENST00000377877 SMIM29Q86T20 159 aa12.72□□□□□ -0.37
RNF38-205ENST00000377877 IGKV4-1P06312 121 aa12.71□□□□□ -0.37
RNF38-205ENST00000377877 H7BZZ5 65 aa12.7□□□□□ -0.38
RNF38-205ENST00000377877 BPY2O14599 106 aa12.7□□□□□ -0.38
RNF38-205ENST00000377877 RPL37AP61513 92 aaKnown RBP12.7□□□□□ -0.38
RNF38-205ENST00000377877 HSPG2P98160 4391 aa12.7□□□□□ -0.38
RNF38-205ENST00000377877 SPRR4Q96PI1 79 aa12.69□□□□□ -0.38
RNF38-205ENST00000377877 RYR1P21817 5038 aa12.68□□□□□ -0.38
RNF38-205ENST00000377877 NDUFC1O43677 76 aa12.67□□□□□ -0.38
RNF38-205ENST00000377877 SPRR1BP22528 89 aa12.67□□□□□ -0.38
RNF38-205ENST00000377877 ANAPC11Q9NYG5 84 aa12.67□□□□□ -0.38
RNF38-205ENST00000377877 CDK2AP2O75956 126 aa12.66□□□□□ -0.38
RNF38-205ENST00000377877 OXTP01178 125 aa12.66□□□□□ -0.38
RNF38-205ENST00000377877 KRTAP10-4P60372 401 aaPredicted RBP12.66□□□□□ -0.38
RNF38-205ENST00000377877 SNURFQ9Y675 71 aa12.65□□□□□ -0.38
RNF38-205ENST00000377877 Q8N9L7 120 aa12.65□□□□□ -0.38
RNF38-205ENST00000377877 KIAA1109Q2LD37 5005 aa12.65□□□□□ -0.39
RNF38-205ENST00000377877 Q8NBF4 154 aa12.63□□□□□ -0.39
RNF38-205ENST00000377877 A0A1W2PNM2 257 aa12.63□□□□□ -0.39
RNF38-205ENST00000377877 KRTAP17-1Q9BYP8 105 aa12.62□□□□□ -0.39
RNF38-205ENST00000377877 SERP1Q9Y6X1 66 aa12.62□□□□□ -0.39
RNF38-205ENST00000377877 LINC00483Q53H64 154 aa12.61□□□□□ -0.39
RNF38-205ENST00000377877 ZNF706Q9Y5V0 76 aaPredicted RBP12.61□□□□□ -0.39
RNF38-205ENST00000377877 F8WEM9 126 aa12.6□□□□□ -0.39
RNF38-205ENST00000377877 ATP5EP56381 51 aaPredicted RBP12.59□□□□□ -0.39
RNF38-205ENST00000377877 TMEM254Q8TBM7 123 aa12.59□□□□□ -0.39
RNF38-205ENST00000377877 OCR1Q9BZK8 76 aa12.58□□□□□ -0.4
RNF38-205ENST00000377877 A0A0G2JQZ4 141 aa12.57□□□□□ -0.4
RNF38-205ENST00000377877 SPINK6Q6UWN8 80 aa12.54□□□□□ -0.4
RNF38-205ENST00000377877 IGLV9-49A0A0B4J1Y8 123 aa12.53□□□□□ -0.4
RNF38-205ENST00000377877 FAM229AH3BQW9 127 aa12.53□□□□□ -0.4
RNF38-205ENST00000377877 KRTAP1-4P0C5Y4 121 aa12.52□□□□□ -0.4
RNF38-205ENST00000377877 C5orf47Q569G3 176 aa12.52□□□□□ -0.4
RNF38-205ENST00000377877 IGLV8-61A0A075B6I0 122 aa12.51□□□□□ -0.41
RNF38-205ENST00000377877 A0A0U1RQV1 116 aa12.5□□□□□ -0.41
RNF38-205ENST00000377877 Q5XG85 94 aa12.5□□□□□ -0.41
RNF38-205ENST00000377877 Q5VSD8 79 aa12.5□□□□□ -0.41
RNF38-205ENST00000377877 PLA2G1BP04054 148 aaKnown RBP12.49□□□□□ -0.41
RNF38-205ENST00000377877 IGFL1Q6UW32 110 aa12.49□□□□□ -0.41
RNF38-205ENST00000377877 A0A087X002 238 aa12.48□□□□□ -0.41
RNF38-205ENST00000377877 PKHD1L1Q86WI1 4243 aa12.46□□□□□ -0.42
RNF38-205ENST00000377877 MOBPQ13875 183 aa12.45□□□□□ -0.42
RNF38-205ENST00000377877 DSCR10P59022 87 aa12.45□□□□□ -0.42
RNF38-205ENST00000377877 KRTAP13-2Q52LG2 175 aa12.44□□□□□ -0.42
RNF38-205ENST00000377877 C4orf26Q17RF5 130 aa12.42□□□□□ -0.42
RNF38-205ENST00000377877 FAM229BQ4G0N7 80 aa12.41□□□□□ -0.42
RNF38-205ENST00000377877 Q8N1X5 172 aa12.41□□□□□ -0.42
RNF38-205ENST00000377877 SMIM26A0A096LP01 95 aa12.41□□□□□ -0.42
RNF38-205ENST00000377877 K7EQZ3 153 aa12.39□□□□□ -0.43
RNF38-205ENST00000377877 BIRC6Q9NR09 4857 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms