RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 Q8N1X5 172 aa11.16□□□□□ -0.62
CNTNAP3-204ENST00000377656 FRYQ5TBA9 3013 aa11.16□□□□□ -0.62
CNTNAP3-204ENST00000377656 CRIPTQ9P021 101 aa11.16□□□□□ -0.62
CNTNAP3-204ENST00000377656 GCN1Q92616 2671 aaKnown RBP11.15□□□□□ -0.62
CNTNAP3-204ENST00000377656 CDH23Q9H251 3354 aa11.14□□□□□ -0.63
CNTNAP3-204ENST00000377656 OCR1Q9BZK8 76 aa11.14□□□□□ -0.63
CNTNAP3-204ENST00000377656 FLG2Q5D862 2391 aaPredicted RBP11.13□□□□□ -0.63
CNTNAP3-204ENST00000377656 CELSR3Q9NYQ7 3312 aa11.09□□□□□ -0.63
CNTNAP3-204ENST00000377656 PRR26Q8N8Z3 221 aa11.07□□□□□ -0.64
CNTNAP3-204ENST00000377656 FAM229BQ4G0N7 80 aa11.05□□□□□ -0.64
CNTNAP3-204ENST00000377656 LINC01554Q52M75 96 aa11.04□□□□□ -0.64
CNTNAP3-204ENST00000377656 SPRR1AP35321 89 aa11.03□□□□□ -0.64
CNTNAP3-204ENST00000377656 PLAC8Q9NZF1 115 aa11.03□□□□□ -0.64
CNTNAP3-204ENST00000377656 UBR5O95071 2799 aaPredicted RBP11.03□□□□□ -0.64
CNTNAP3-204ENST00000377656 BAHCC1Q9P281 2608 aa11.02□□□□□ -0.65
CNTNAP3-204ENST00000377656 Q8NDZ9 215 aa11.02□□□□□ -0.65
CNTNAP3-204ENST00000377656 IGLV7-46A0A075B6I9 117 aa11.01□□□□□ -0.65
CNTNAP3-204ENST00000377656 NBEAL2Q6ZNJ1 2754 aa11.01□□□□□ -0.65
CNTNAP3-204ENST00000377656 A0A0D9SG42 100 aa11□□□□□ -0.65
CNTNAP3-204ENST00000377656 Q6ZSA8 131 aa11□□□□□ -0.65
CNTNAP3-204ENST00000377656 NBEAQ8NFP9 2946 aa10.97□□□□□ -0.65
CNTNAP3-204ENST00000377656 CDC42SE1Q9NRR8 79 aa10.96□□□□□ -0.65
CNTNAP3-204ENST00000377656 IGSF10Q6WRI0 2623 aa10.95□□□□□ -0.66
CNTNAP3-204ENST00000377656 HRES1P13985 223 aa10.95□□□□□ -0.66
CNTNAP3-204ENST00000377656 LAMA1P25391 3075 aa10.94□□□□□ -0.66
CNTNAP3-204ENST00000377656 VCANP13611 3396 aa10.94□□□□□ -0.66
CNTNAP3-204ENST00000377656 MMP24-AS1A0A0U1RRL7 71 aa10.93□□□□□ -0.66
CNTNAP3-204ENST00000377656 SPRR1BP22528 89 aa10.92□□□□□ -0.66
CNTNAP3-204ENST00000377656 KTN1-AS1Q86SY8 53 aa10.92□□□□□ -0.66
CNTNAP3-204ENST00000377656 KRTAP1-5Q9BYS1 174 aa10.89□□□□□ -0.67
CNTNAP3-204ENST00000377656 Q1T7F1 81 aa10.89□□□□□ -0.67
CNTNAP3-204ENST00000377656 STAB2Q8WWQ8 2551 aa10.89□□□□□ -0.67
CNTNAP3-204ENST00000377656 CYSTM1Q9H1C7 97 aa10.88□□□□□ -0.67
CNTNAP3-204ENST00000377656 NSD1Q96L73 2696 aaPredicted RBP10.88□□□□□ -0.67
CNTNAP3-204ENST00000377656 KALRNO60229 2985 aa10.87□□□□□ -0.67
CNTNAP3-204ENST00000377656 SZT2Q5T011 3432 aa10.86□□□□□ -0.67
CNTNAP3-204ENST00000377656 LCA10Q71F78 164 aa10.86□□□□□ -0.67
CNTNAP3-204ENST00000377656 ZCCHC13Q8WW36 166 aaKnown RBP10.85□□□□□ -0.67
CNTNAP3-204ENST00000377656 LINC00472Q9H8W2 130 aa10.84□□□□□ -0.67
CNTNAP3-204ENST00000377656 KRTAP26-1Q6PEX3 210 aa10.84□□□□□ -0.67
CNTNAP3-204ENST00000377656 Q8N9P0 234 aaPredicted RBP10.84□□□□□ -0.67
CNTNAP3-204ENST00000377656 TACC2O95359 2948 aa10.83□□□□□ -0.68
CNTNAP3-204ENST00000377656 A0A1B0GU33 70 aa10.83□□□□□ -0.68
CNTNAP3-204ENST00000377656 DMXL2Q8TDJ6 3036 aa10.82□□□□□ -0.68
CNTNAP3-204ENST00000377656 DNAH14Q0VDD8 3507 aa10.8□□□□□ -0.68
CNTNAP3-204ENST00000377656 ATMQ13315 3056 aa10.8□□□□□ -0.68
CNTNAP3-204ENST00000377656 Q5XG85 94 aa10.79□□□□□ -0.68
CNTNAP3-204ENST00000377656 FLNCQ14315 2725 aa10.78□□□□□ -0.68
CNTNAP3-204ENST00000377656 ADGRG4Q8IZF6 3080 aa10.78□□□□□ -0.68
CNTNAP3-204ENST00000377656 FRYLO94915 3013 aa10.77□□□□□ -0.69
CNTNAP3-204ENST00000377656 DMBT1Q9UGM3 2413 aaPredicted RBP10.77□□□□□ -0.69
CNTNAP3-204ENST00000377656 BOD1L1Q8NFC6 3051 aa10.77□□□□□ -0.69
CNTNAP3-204ENST00000377656 CAMK2N1Q7Z7J9 78 aa10.74□□□□□ -0.69
CNTNAP3-204ENST00000377656 Q5W150 140 aa10.74□□□□□ -0.69
CNTNAP3-204ENST00000377656 ITPR1Q14643 2758 aa10.73□□□□□ -0.69
CNTNAP3-204ENST00000377656 CSAG1Q6PB30 78 aa10.73□□□□□ -0.69
CNTNAP3-204ENST00000377656 Q75L30 129 aa10.72□□□□□ -0.69
CNTNAP3-204ENST00000377656 FP248Q71RG6 208 aaPredicted RBP10.72□□□□□ -0.69
CNTNAP3-204ENST00000377656 COL12A1Q99715 3063 aa10.72□□□□□ -0.69
CNTNAP3-204ENST00000377656 LINC01558Q9Y6Z2 57 aa10.72□□□□□ -0.69
CNTNAP3-204ENST00000377656 M0R2T5 61 aa10.7□□□□□ -0.7
CNTNAP3-204ENST00000377656 SPINK7P58062 85 aa10.7□□□□□ -0.7
CNTNAP3-204ENST00000377656 KRTAP10-1P60331 282 aa10.68□□□□□ -0.7
CNTNAP3-204ENST00000377656 ITPR2Q14571 2701 aa10.68□□□□□ -0.7
CNTNAP3-204ENST00000377656 ASH1LQ9NR48 2969 aaKnown RBP10.66□□□□□ -0.7
CNTNAP3-204ENST00000377656 LCE6AA0A183 80 aa10.66□□□□□ -0.7
CNTNAP3-204ENST00000377656 KRTAP10-2P60368 255 aa10.66□□□□□ -0.7
CNTNAP3-204ENST00000377656 S4R3F8 94 aa10.63□□□□□ -0.71
CNTNAP3-204ENST00000377656 Q5VSD8 79 aa10.62□□□□□ -0.71
CNTNAP3-204ENST00000377656 COL6A3P12111 3177 aa10.62□□□□□ -0.71
CNTNAP3-204ENST00000377656 OXTP01178 125 aa10.62□□□□□ -0.71
CNTNAP3-204ENST00000377656 DMAC1Q96GE9 116 aa10.61□□□□□ -0.71
CNTNAP3-204ENST00000377656 LUZP6Q538Z0 58 aa10.59□□□□□ -0.71
CNTNAP3-204ENST00000377656 REV3LO60673 3130 aa10.59□□□□□ -0.71
CNTNAP3-204ENST00000377656 LINC00483Q53H64 154 aa10.59□□□□□ -0.71
CNTNAP3-204ENST00000377656 KRTAP4-16G5E9R7 235 aaPredicted RBP10.59□□□□□ -0.71
CNTNAP3-204ENST00000377656 SEC61BP60468 96 aaKnown RBP10.58□□□□□ -0.72
CNTNAP3-204ENST00000377656 CFAP47Q6ZTR5 3102 aa10.57□□□□□ -0.72
CNTNAP3-204ENST00000377656 PANO1I0J062 215 aa10.57□□□□□ -0.72
CNTNAP3-204ENST00000377656 LRBAP50851 2863 aa10.56□□□□□ -0.72
CNTNAP3-204ENST00000377656 Q6ZR54 194 aa10.54□□□□□ -0.72
CNTNAP3-204ENST00000377656 ZZEF1O43149 2961 aa10.53□□□□□ -0.72
CNTNAP3-204ENST00000377656 R4GN34 69 aa10.51□□□□□ -0.73
CNTNAP3-204ENST00000377656 Q5VV11 94 aa10.51□□□□□ -0.73
CNTNAP3-204ENST00000377656 UTP20O75691 2785 aaKnown RBP10.49□□□□□ -0.73
CNTNAP3-204ENST00000377656 SPEGQ15772 3267 aa10.49□□□□□ -0.73
CNTNAP3-204ENST00000377656 HIVEP1P15822 2718 aa10.46□□□□□ -0.74
CNTNAP3-204ENST00000377656 EYSQ5T1H1 3165 aa10.43□□□□□ -0.74
CNTNAP3-204ENST00000377656 A0A087X002 238 aa10.42□□□□□ -0.74
CNTNAP3-204ENST00000377656 KRTAP29-1A8MX34 341 aaPredicted RBP10.42□□□□□ -0.74
CNTNAP3-204ENST00000377656 CELSR2Q9HCU4 2923 aa10.41□□□□□ -0.74
CNTNAP3-204ENST00000377656 PRAC1Q96KF2 57 aa10.38□□□□□ -0.75
CNTNAP3-204ENST00000377656 KMT2BQ9UMN6 2715 aaPredicted RBP10.37□□□□□ -0.75
CNTNAP3-204ENST00000377656 TENM4Q6N022 2769 aa10.37□□□□□ -0.75
CNTNAP3-204ENST00000377656 RPL37P61927 97 aaKnown RBP10.36□□□□□ -0.75
CNTNAP3-204ENST00000377656 ZANQ9Y493 2812 aa10.35□□□□□ -0.75
CNTNAP3-204ENST00000377656 NIPBLQ6KC79 2804 aaeCLIP10.34□□□□□ -0.75
CNTNAP3-204ENST00000377656 APCP25054 2843 aa10.33□□□□□ -0.76
CNTNAP3-204ENST00000377656 Q6ZRN7 208 aaPredicted RBP10.31□□□□□ -0.76
CNTNAP3-204ENST00000377656 KRTAP11-1Q8IUC1 163 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms