RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 DSPP15924 2871 aaKnown RBP11.72□□□□□ -0.53
CNTNAP3B-203ENST00000377561 Q1T7F1 81 aa11.71□□□□□ -0.53
CNTNAP3B-203ENST00000377561 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.68□□□□□ -0.54
CNTNAP3B-203ENST00000377561 FAM229BQ4G0N7 80 aa11.66□□□□□ -0.54
CNTNAP3B-203ENST00000377561 FP248Q71RG6 208 aaPredicted RBP11.64□□□□□ -0.55
CNTNAP3B-203ENST00000377561 TNP2Q05952 138 aa11.64□□□□□ -0.55
CNTNAP3B-203ENST00000377561 KRTAP26-1Q6PEX3 210 aa11.63□□□□□ -0.55
CNTNAP3B-203ENST00000377561 FRYQ5TBA9 3013 aa11.62□□□□□ -0.55
CNTNAP3B-203ENST00000377561 Q6ZSA8 131 aa11.62□□□□□ -0.55
CNTNAP3B-203ENST00000377561 IGSF10Q6WRI0 2623 aa11.6□□□□□ -0.55
CNTNAP3B-203ENST00000377561 LUZP6Q538Z0 58 aa11.6□□□□□ -0.55
CNTNAP3B-203ENST00000377561 GCN1Q92616 2671 aaKnown RBP11.59□□□□□ -0.55
CNTNAP3B-203ENST00000377561 MAP1AP78559 2803 aaPredicted RBP11.58□□□□□ -0.56
CNTNAP3B-203ENST00000377561 TEX15Q9BXT5 2789 aa11.57□□□□□ -0.56
CNTNAP3B-203ENST00000377561 OXTP01178 125 aa11.56□□□□□ -0.56
CNTNAP3B-203ENST00000377561 PRR26Q8N8Z3 221 aa11.56□□□□□ -0.56
CNTNAP3B-203ENST00000377561 IGLV7-46A0A075B6I9 117 aa11.56□□□□□ -0.56
CNTNAP3B-203ENST00000377561 PLAC8Q9NZF1 115 aa11.54□□□□□ -0.56
CNTNAP3B-203ENST00000377561 SPRR1BP22528 89 aa11.54□□□□□ -0.56
CNTNAP3B-203ENST00000377561 SZT2Q5T011 3432 aa11.54□□□□□ -0.56
CNTNAP3B-203ENST00000377561 LAMA1P25391 3075 aa11.54□□□□□ -0.56
CNTNAP3B-203ENST00000377561 UNC79Q9P2D8 2635 aa11.52□□□□□ -0.57
CNTNAP3B-203ENST00000377561 CAMK2N1Q7Z7J9 78 aa11.51□□□□□ -0.57
CNTNAP3B-203ENST00000377561 MMP24-AS1A0A0U1RRL7 71 aa11.51□□□□□ -0.57
CNTNAP3B-203ENST00000377561 KRTAP1-5Q9BYS1 174 aa11.5□□□□□ -0.57
CNTNAP3B-203ENST00000377561 TEP1Q99973 2627 aaKnown RBP11.5□□□□□ -0.57
CNTNAP3B-203ENST00000377561 CELSR3Q9NYQ7 3312 aa11.47□□□□□ -0.57
CNTNAP3B-203ENST00000377561 HRES1P13985 223 aa11.46□□□□□ -0.58
CNTNAP3B-203ENST00000377561 VCANP13611 3396 aa11.45□□□□□ -0.58
CNTNAP3B-203ENST00000377561 Q75L30 129 aa11.45□□□□□ -0.58
CNTNAP3B-203ENST00000377561 LINC00472Q9H8W2 130 aa11.45□□□□□ -0.58
CNTNAP3B-203ENST00000377561 SETXQ7Z333 2677 aaKnown RBP11.44□□□□□ -0.58
CNTNAP3B-203ENST00000377561 A0A1B0GU33 70 aa11.44□□□□□ -0.58
CNTNAP3B-203ENST00000377561 DNAH14Q0VDD8 3507 aa11.42□□□□□ -0.58
CNTNAP3B-203ENST00000377561 COL6A5A8TX70 2615 aa11.42□□□□□ -0.58
CNTNAP3B-203ENST00000377561 M0R2T5 61 aa11.41□□□□□ -0.58
CNTNAP3B-203ENST00000377561 Q8N9P0 234 aaPredicted RBP11.41□□□□□ -0.58
CNTNAP3B-203ENST00000377561 LINC00483Q53H64 154 aa11.4□□□□□ -0.58
CNTNAP3B-203ENST00000377561 NBEAL2Q6ZNJ1 2754 aa11.39□□□□□ -0.59
CNTNAP3B-203ENST00000377561 NOTCH1P46531 2555 aa11.38□□□□□ -0.59
CNTNAP3B-203ENST00000377561 STAB1Q9NY15 2570 aa11.36□□□□□ -0.59
CNTNAP3B-203ENST00000377561 ZCCHC13Q8WW36 166 aaKnown RBP11.36□□□□□ -0.59
CNTNAP3B-203ENST00000377561 Q5VV11 94 aa11.36□□□□□ -0.59
CNTNAP3B-203ENST00000377561 KRTAP4-16G5E9R7 235 aaPredicted RBP11.35□□□□□ -0.59
CNTNAP3B-203ENST00000377561 NBEAQ8NFP9 2946 aa11.33□□□□□ -0.6
CNTNAP3B-203ENST00000377561 CSAG1Q6PB30 78 aa11.32□□□□□ -0.6
CNTNAP3B-203ENST00000377561 LINC01558Q9Y6Z2 57 aa11.31□□□□□ -0.6
CNTNAP3B-203ENST00000377561 UBR5O95071 2799 aaPredicted RBP11.31□□□□□ -0.6
CNTNAP3B-203ENST00000377561 KALRNO60229 2985 aa11.3□□□□□ -0.6
CNTNAP3B-203ENST00000377561 FLG2Q5D862 2391 aaPredicted RBP11.3□□□□□ -0.6
CNTNAP3B-203ENST00000377561 FLNCQ14315 2725 aa11.28□□□□□ -0.6
CNTNAP3B-203ENST00000377561 ATMQ13315 3056 aa11.28□□□□□ -0.6
CNTNAP3B-203ENST00000377561 NBEAL1Q6ZS30 2694 aa11.28□□□□□ -0.6
CNTNAP3B-203ENST00000377561 PRAC1Q96KF2 57 aa11.27□□□□□ -0.61
CNTNAP3B-203ENST00000377561 S4R3F8 94 aa11.26□□□□□ -0.61
CNTNAP3B-203ENST00000377561 ADGRG4Q8IZF6 3080 aa11.25□□□□□ -0.61
CNTNAP3B-203ENST00000377561 DMAC1Q96GE9 116 aa11.24□□□□□ -0.61
CNTNAP3B-203ENST00000377561 BOD1L1Q8NFC6 3051 aa11.22□□□□□ -0.61
CNTNAP3B-203ENST00000377561 Q5W150 140 aa11.22□□□□□ -0.61
CNTNAP3B-203ENST00000377561 H3BS24 57 aa11.22□□□□□ -0.61
CNTNAP3B-203ENST00000377561 ITPR1Q14643 2758 aa11.21□□□□□ -0.62
CNTNAP3B-203ENST00000377561 FRYLO94915 3013 aa11.2□□□□□ -0.62
CNTNAP3B-203ENST00000377561 SPINK7P58062 85 aa11.19□□□□□ -0.62
CNTNAP3B-203ENST00000377561 FREM2Q5SZK8 3169 aa11.18□□□□□ -0.62
CNTNAP3B-203ENST00000377561 LRBAP50851 2863 aa11.18□□□□□ -0.62
CNTNAP3B-203ENST00000377561 PANO1I0J062 215 aa11.17□□□□□ -0.62
CNTNAP3B-203ENST00000377561 COL12A1Q99715 3063 aa11.15□□□□□ -0.62
CNTNAP3B-203ENST00000377561 COL6A3P12111 3177 aa11.14□□□□□ -0.63
CNTNAP3B-203ENST00000377561 DMXL2Q8TDJ6 3036 aa11.13□□□□□ -0.63
CNTNAP3B-203ENST00000377561 R4GN34 69 aa11.13□□□□□ -0.63
CNTNAP3B-203ENST00000377561 ITPR2Q14571 2701 aa11.12□□□□□ -0.63
CNTNAP3B-203ENST00000377561 SEC61BP60468 96 aaKnown RBP11.12□□□□□ -0.63
CNTNAP3B-203ENST00000377561 KRTAP10-1P60331 282 aa11.12□□□□□ -0.63
CNTNAP3B-203ENST00000377561 KRTAP10-2P60368 255 aa11.12□□□□□ -0.63
CNTNAP3B-203ENST00000377561 KRTAP29-1A8MX34 341 aaPredicted RBP11.11□□□□□ -0.63
CNTNAP3B-203ENST00000377561 Q6ZR54 194 aa11.09□□□□□ -0.63
CNTNAP3B-203ENST00000377561 TACC2O95359 2948 aa11.08□□□□□ -0.64
CNTNAP3B-203ENST00000377561 Q5VSD8 79 aa11.08□□□□□ -0.64
CNTNAP3B-203ENST00000377561 UTP20O75691 2785 aaKnown RBP11.05□□□□□ -0.64
CNTNAP3B-203ENST00000377561 NSD1Q96L73 2696 aaPredicted RBP11.04□□□□□ -0.64
CNTNAP3B-203ENST00000377561 A0A0A0MQY5 61 aa11.04□□□□□ -0.64
CNTNAP3B-203ENST00000377561 SPTBN5Q9NRC6 3674 aaKnown RBP11.02□□□□□ -0.65
CNTNAP3B-203ENST00000377561 KRTAP7-1Q8IUC3 87 aa11.02□□□□□ -0.65
CNTNAP3B-203ENST00000377561 BAHCC1Q9P281 2608 aa10.99□□□□□ -0.65
CNTNAP3B-203ENST00000377561 LCE6AA0A183 80 aa10.99□□□□□ -0.65
CNTNAP3B-203ENST00000377561 KRTAP11-1Q8IUC1 163 aa10.99□□□□□ -0.65
CNTNAP3B-203ENST00000377561 TNRC18O15417 2968 aaPredicted RBP10.98□□□□□ -0.65
CNTNAP3B-203ENST00000377561 Q6ZRN7 208 aaPredicted RBP10.97□□□□□ -0.65
CNTNAP3B-203ENST00000377561 RPL37P61927 97 aaKnown RBP10.94□□□□□ -0.66
CNTNAP3B-203ENST00000377561 KMT2BQ9UMN6 2715 aaPredicted RBP10.92□□□□□ -0.66
CNTNAP3B-203ENST00000377561 A0A087X002 238 aa10.91□□□□□ -0.66
CNTNAP3B-203ENST00000377561 ZZEF1O43149 2961 aa10.91□□□□□ -0.66
CNTNAP3B-203ENST00000377561 REV3LO60673 3130 aa10.91□□□□□ -0.66
CNTNAP3B-203ENST00000377561 STAB2Q8WWQ8 2551 aa10.9□□□□□ -0.66
CNTNAP3B-203ENST00000377561 M0QZ58 72 aa10.89□□□□□ -0.67
CNTNAP3B-203ENST00000377561 SPEGQ15772 3267 aa10.88□□□□□ -0.67
CNTNAP3B-203ENST00000377561 EYSQ5T1H1 3165 aa10.88□□□□□ -0.67
CNTNAP3B-203ENST00000377561 APCP25054 2843 aa10.87□□□□□ -0.67
CNTNAP3B-203ENST00000377561 ROMO1P60602 79 aa10.86□□□□□ -0.67
CNTNAP3B-203ENST00000377561 NOTCH2NLQ7Z3S9 236 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms