RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 H0Y9J4 135 aa13.45□□□□□ -0.26
RNF39-202ENST00000376751 TGP01266 2768 aa13.45□□□□□ -0.26
RNF39-202ENST00000376751 F8WEM9 126 aa13.45□□□□□ -0.26
RNF39-202ENST00000376751 IGKV4-1P06312 121 aa13.45□□□□□ -0.26
RNF39-202ENST00000376751 A0A1B0GW54 56 aa13.44□□□□□ -0.26
RNF39-202ENST00000376751 BPY2O14599 106 aa13.43□□□□□ -0.26
RNF39-202ENST00000376751 IGFL1Q6UW32 110 aa13.43□□□□□ -0.26
RNF39-202ENST00000376751 DPH3Q96FX2 82 aa13.42□□□□□ -0.26
RNF39-202ENST00000376751 UBE2AP49459 152 aa13.41□□□□□ -0.26
RNF39-202ENST00000376751 IGLV8-61A0A075B6I0 122 aa13.41□□□□□ -0.26
RNF39-202ENST00000376751 RTL8CO15255 209 aa13.4□□□□□ -0.27
RNF39-202ENST00000376751 BCE1O60756 84 aa13.4□□□□□ -0.27
RNF39-202ENST00000376751 KRTAP13-1Q8IUC0 172 aa13.4□□□□□ -0.27
RNF39-202ENST00000376751 DNAH6Q9C0G6 4158 aa13.38□□□□□ -0.27
RNF39-202ENST00000376751 SPRR1BP22528 89 aa13.38□□□□□ -0.27
RNF39-202ENST00000376751 TRAV7A0A075B6U4 112 aa13.36□□□□□ -0.27
RNF39-202ENST00000376751 C1orf134Q5TEV5 83 aa13.32□□□□□ -0.28
RNF39-202ENST00000376751 SMIM20Q8N5G0 67 aa13.31□□□□□ -0.28
RNF39-202ENST00000376751 LY6G6CO95867 125 aa13.3□□□□□ -0.28
RNF39-202ENST00000376751 DSCR10P59022 87 aa13.29□□□□□ -0.28
RNF39-202ENST00000376751 C20orf197Q8N268 126 aa13.29□□□□□ -0.28
RNF39-202ENST00000376751 DNAH8Q96JB1 4490 aa13.26□□□□□ -0.29
RNF39-202ENST00000376751 A0A087WSZ3 146 aa13.26□□□□□ -0.29
RNF39-202ENST00000376751 IGLV5-52A0A0A0MRZ9 124 aa13.26□□□□□ -0.29
RNF39-202ENST00000376751 PLAC8Q9NZF1 115 aa13.25□□□□□ -0.29
RNF39-202ENST00000376751 ALMS1Q8TCU4 4167 aa13.25□□□□□ -0.29
RNF39-202ENST00000376751 FRAS1Q86XX4 4008 aa13.23□□□□□ -0.29
RNF39-202ENST00000376751 K7EQZ3 153 aa13.23□□□□□ -0.29
RNF39-202ENST00000376751 PSORS1C2Q9UIG4 136 aa13.23□□□□□ -0.29
RNF39-202ENST00000376751 DEFB116Q30KQ4 102 aa13.21□□□□□ -0.29
RNF39-202ENST00000376751 OCR1Q9BZK8 76 aa13.2□□□□□ -0.3
RNF39-202ENST00000376751 TMEM258P61165 79 aa13.19□□□□□ -0.3
RNF39-202ENST00000376751 DNAH11Q96DT5 4516 aa13.18□□□□□ -0.3
RNF39-202ENST00000376751 SNURFQ9Y675 71 aa13.17□□□□□ -0.3
RNF39-202ENST00000376751 DNAH5Q8TE73 4624 aa13.16□□□□□ -0.3
RNF39-202ENST00000376751 KLKP1Q107X0 134 aa13.15□□□□□ -0.3
RNF39-202ENST00000376751 KRTAP21-3Q3LHN1 58 aa13.14□□□□□ -0.31
RNF39-202ENST00000376751 LINC00483Q53H64 154 aa13.14□□□□□ -0.31
RNF39-202ENST00000376751 WWC2-AS2Q96NR7 200 aa13.14□□□□□ -0.31
RNF39-202ENST00000376751 IGLV9-49A0A0B4J1Y8 123 aa13.12□□□□□ -0.31
RNF39-202ENST00000376751 KRTAP10-2P60368 255 aa13.12□□□□□ -0.31
RNF39-202ENST00000376751 H7BZZ5 65 aa13.11□□□□□ -0.31
RNF39-202ENST00000376751 RPL37AP61513 92 aaKnown RBP13.1□□□□□ -0.31
RNF39-202ENST00000376751 FAM30AQ9NZY2 134 aa13.09□□□□□ -0.31
RNF39-202ENST00000376751 HYDINQ4G0P3 5121 aa13.09□□□□□ -0.31
RNF39-202ENST00000376751 ZNF861PO60384 105 aa13.09□□□□□ -0.31
RNF39-202ENST00000376751 TMEM254Q8TBM7 123 aa13.08□□□□□ -0.32
RNF39-202ENST00000376751 LINC00472Q9H8W2 130 aa13.07□□□□□ -0.32
RNF39-202ENST00000376751 HCG22E2RYF7 251 aa13.07□□□□□ -0.32
RNF39-202ENST00000376751 ANAPC11Q9NYG5 84 aa13.07□□□□□ -0.32
RNF39-202ENST00000376751 ZNF706Q9Y5V0 76 aaPredicted RBP13.07□□□□□ -0.32
RNF39-202ENST00000376751 PKD1P98161 4303 aa13.04□□□□□ -0.32
RNF39-202ENST00000376751 FAT2Q9NYQ8 4349 aa13.03□□□□□ -0.32
RNF39-202ENST00000376751 A0A0U1RQV1 116 aa13.02□□□□□ -0.32
RNF39-202ENST00000376751 J3KT08 172 aa13.01□□□□□ -0.33
RNF39-202ENST00000376751 IGLV7-43P04211 117 aa13.01□□□□□ -0.33
RNF39-202ENST00000376751 MOBPQ13875 183 aa13□□□□□ -0.33
RNF39-202ENST00000376751 WFDC13Q8IUB5 93 aa13□□□□□ -0.33
RNF39-202ENST00000376751 CIRBP-AS1Q8TBR5 109 aa13□□□□□ -0.33
RNF39-202ENST00000376751 FAM236DA0A1B0GTK5 79 aa13□□□□□ -0.33
RNF39-202ENST00000376751 FAM236CP0DP71 79 aa13□□□□□ -0.33
RNF39-202ENST00000376751 LCE6AA0A183 80 aa12.98□□□□□ -0.33
RNF39-202ENST00000376751 HRCT1Q6UXD1 115 aa12.98□□□□□ -0.33
RNF39-202ENST00000376751 PRR15Q8IV56 129 aa12.98□□□□□ -0.33
RNF39-202ENST00000376751 A8MWP4 228 aa12.97□□□□□ -0.33
RNF39-202ENST00000376751 OXTP01178 125 aa12.96□□□□□ -0.33
RNF39-202ENST00000376751 RPS28P62857 69 aaKnown RBP12.96□□□□□ -0.33
RNF39-202ENST00000376751 Q96NJ1 140 aa12.96□□□□□ -0.33
RNF39-202ENST00000376751 KRTAP29-1A8MX34 341 aaPredicted RBP12.96□□□□□ -0.34
RNF39-202ENST00000376751 KRTAP10-1P60331 282 aa12.95□□□□□ -0.34
RNF39-202ENST00000376751 NDUFC1O43677 76 aa12.94□□□□□ -0.34
RNF39-202ENST00000376751 Q6ZSA8 131 aa12.92□□□□□ -0.34
RNF39-202ENST00000376751 CASC2Q6XLA1 102 aa12.89□□□□□ -0.35
RNF39-202ENST00000376751 LRP1BQ9NZR2 4599 aa12.86□□□□□ -0.35
RNF39-202ENST00000376751 MMP24-AS1A0A0U1RRL7 71 aa12.85□□□□□ -0.35
RNF39-202ENST00000376751 ZCCHC13Q8WW36 166 aaKnown RBP12.85□□□□□ -0.35
RNF39-202ENST00000376751 C5orf47Q569G3 176 aa12.82□□□□□ -0.36
RNF39-202ENST00000376751 SACSQ9NZJ4 4579 aa12.8□□□□□ -0.36
RNF39-202ENST00000376751 NDUFB1O75438 58 aa12.8□□□□□ -0.36
RNF39-202ENST00000376751 SERP1Q9Y6X1 66 aa12.8□□□□□ -0.36
RNF39-202ENST00000376751 ATP5EP56381 51 aaPredicted RBP12.77□□□□□ -0.37
RNF39-202ENST00000376751 hDV103S1A0JD37 113 aa12.74□□□□□ -0.37
RNF39-202ENST00000376751 ASB16-AS1Q495Z4 193 aa12.73□□□□□ -0.37
RNF39-202ENST00000376751 C8orf17Q9NRJ1 99 aa12.73□□□□□ -0.37
RNF39-202ENST00000376751 VPS13BQ7Z7G8 4022 aa12.73□□□□□ -0.37
RNF39-202ENST00000376751 A0A1B0GVX0 72 aa12.72□□□□□ -0.37
RNF39-202ENST00000376751 A0A087X002 238 aa12.72□□□□□ -0.37
RNF39-202ENST00000376751 PKHD1P08F94 4074 aa12.71□□□□□ -0.37
RNF39-202ENST00000376751 IGHV6-1A0A0B4J1U7 121 aa12.71□□□□□ -0.37
RNF39-202ENST00000376751 KRTAP13-2Q52LG2 175 aa12.7□□□□□ -0.38
RNF39-202ENST00000376751 H0Y9P7 68 aa12.69□□□□□ -0.38
RNF39-202ENST00000376751 MP68P56378 58 aa12.69□□□□□ -0.38
RNF39-202ENST00000376751 SSBP3-AS1Q7Z2R9 100 aa12.69□□□□□ -0.38
RNF39-202ENST00000376751 CD164Q04900 197 aa12.68□□□□□ -0.38
RNF39-202ENST00000376751 LINC00208Q96KT6 92 aa12.67□□□□□ -0.38
RNF39-202ENST00000376751 NOTCH2NLQ7Z3S9 236 aa12.67□□□□□ -0.38
RNF39-202ENST00000376751 CDK2AP2O75956 126 aa12.65□□□□□ -0.38
RNF39-202ENST00000376751 SPINK6Q6UWN8 80 aa12.65□□□□□ -0.38
RNF39-202ENST00000376751 TRAV22A0A0B4J277 110 aa12.63□□□□□ -0.39
RNF39-202ENST00000376751 KRTAP1-4P0C5Y4 121 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms