RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 CENPEQ02224 2701 aa6.21□□□□□ -1.42
PTCH1-204ENST00000375290 MAST4O15021 2626 aa6.21□□□□□ -1.42
PTCH1-204ENST00000375290 KRTAP10-3P60369 221 aa6.21□□□□□ -1.42
PTCH1-204ENST00000375290 A0A0G2JQZ4 141 aa6.2□□□□□ -1.42
PTCH1-204ENST00000375290 KMT2BQ9UMN6 2715 aaPredicted RBP6.18□□□□□ -1.42
PTCH1-204ENST00000375290 KRTAP1-1Q07627 177 aa6.18□□□□□ -1.42
PTCH1-204ENST00000375290 MGAM2Q2M2H8 2515 aa6.17□□□□□ -1.42
PTCH1-204ENST00000375290 CASC10Q5T4H9 136 aa6.16□□□□□ -1.42
PTCH1-204ENST00000375290 C9orf92A6NGG3 77 aa6.14□□□□□ -1.43
PTCH1-204ENST00000375290 H1FX-AS1Q4G0G2 97 aa6.14□□□□□ -1.43
PTCH1-204ENST00000375290 GOLGB1Q14789 3259 aaKnown RBP6.14□□□□□ -1.43
PTCH1-204ENST00000375290 S4R3F8 94 aa6.14□□□□□ -1.43
PTCH1-204ENST00000375290 A0A0D9SG42 100 aa6.13□□□□□ -1.43
PTCH1-204ENST00000375290 AKAP13Q12802 2813 aa6.13□□□□□ -1.43
PTCH1-204ENST00000375290 UNC79Q9P2D8 2635 aa6.12□□□□□ -1.43
PTCH1-204ENST00000375290 ZNF292O60281 2723 aa6.11□□□□□ -1.43
PTCH1-204ENST00000375290 PRAC1Q96KF2 57 aa6.11□□□□□ -1.43
PTCH1-204ENST00000375290 Q6ZSA8 131 aa6.11□□□□□ -1.43
PTCH1-204ENST00000375290 CHD6Q8TD26 2715 aa6.11□□□□□ -1.43
PTCH1-204ENST00000375290 ANAPC11Q9NYG5 84 aa6.11□□□□□ -1.43
PTCH1-204ENST00000375290 CAMK2N1Q7Z7J9 78 aa6.11□□□□□ -1.43
PTCH1-204ENST00000375290 HELZ2Q9BYK8 2649 aaKnown RBP6.11□□□□□ -1.43
PTCH1-204ENST00000375290 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.09□□□□□ -1.43
PTCH1-204ENST00000375290 CFAP46Q8IYW2 2715 aa6.09□□□□□ -1.44
PTCH1-204ENST00000375290 A0A0C4DFX4 3053 aa6.07□□□□□ -1.44
PTCH1-204ENST00000375290 KRTAP25-1Q3LHN0 102 aa6.07□□□□□ -1.44
PTCH1-204ENST00000375290 FLNBO75369 2602 aaKnown RBP6.07□□□□□ -1.44
PTCH1-204ENST00000375290 KRTAP16-1A8MUX0 517 aa6.06□□□□□ -1.44
PTCH1-204ENST00000375290 HECTD1Q9ULT8 2610 aa6.05□□□□□ -1.44
PTCH1-204ENST00000375290 CHD7Q9P2D1 2997 aa6.04□□□□□ -1.44
PTCH1-204ENST00000375290 J3QL48 77 aa6.04□□□□□ -1.44
PTCH1-204ENST00000375290 R4GN34 69 aa6.04□□□□□ -1.44
PTCH1-204ENST00000375290 M0QZ58 72 aa6.03□□□□□ -1.44
PTCH1-204ENST00000375290 CHD9Q3L8U1 2897 aa6.02□□□□□ -1.45
PTCH1-204ENST00000375290 STAB1Q9NY15 2570 aa6.01□□□□□ -1.45
PTCH1-204ENST00000375290 PANO1I0J062 215 aa6.01□□□□□ -1.45
PTCH1-204ENST00000375290 NOTCH1P46531 2555 aa6□□□□□ -1.45
PTCH1-204ENST00000375290 CEP350Q5VT06 3117 aa5.99□□□□□ -1.45
PTCH1-204ENST00000375290 TEP1Q99973 2627 aaKnown RBP5.99□□□□□ -1.45
PTCH1-204ENST00000375290 SEC61BP60468 96 aaKnown RBP5.98□□□□□ -1.45
PTCH1-204ENST00000375290 DMBT1Q9UGM3 2413 aaPredicted RBP5.96□□□□□ -1.46
PTCH1-204ENST00000375290 NSD1Q96L73 2696 aaPredicted RBP5.95□□□□□ -1.46
PTCH1-204ENST00000375290 SETXQ7Z333 2677 aaKnown RBP5.94□□□□□ -1.46
PTCH1-204ENST00000375290 COL6A5A8TX70 2615 aa5.92□□□□□ -1.46
PTCH1-204ENST00000375290 TEX15Q9BXT5 2789 aa5.91□□□□□ -1.46
PTCH1-204ENST00000375290 KRTAP13-1Q8IUC0 172 aa5.91□□□□□ -1.46
PTCH1-204ENST00000375290 UTRNP46939 3433 aa5.9□□□□□ -1.46
PTCH1-204ENST00000375290 C5orf42Q9H799 3197 aa5.89□□□□□ -1.47
PTCH1-204ENST00000375290 KRTAP1-5Q9BYS1 174 aa5.88□□□□□ -1.47
PTCH1-204ENST00000375290 STAB2Q8WWQ8 2551 aa5.88□□□□□ -1.47
PTCH1-204ENST00000375290 PP632Q6XCG6 107 aa5.88□□□□□ -1.47
PTCH1-204ENST00000375290 NOTCH2NLQ7Z3S9 236 aa5.87□□□□□ -1.47
PTCH1-204ENST00000375290 PCNTO95613 3336 aa5.87□□□□□ -1.47
PTCH1-204ENST00000375290 MAP1AP78559 2803 aaPredicted RBP5.86□□□□□ -1.47
PTCH1-204ENST00000375290 SMR3BP02814 79 aaPredicted RBP5.85□□□□□ -1.47
PTCH1-204ENST00000375290 ITPR2Q14571 2701 aa5.83□□□□□ -1.48
PTCH1-204ENST00000375290 CFAP54Q96N23 3096 aa5.83□□□□□ -1.48
PTCH1-204ENST00000375290 NBEAL2Q6ZNJ1 2754 aa5.82□□□□□ -1.48
PTCH1-204ENST00000375290 KRTAP11-1Q8IUC1 163 aa5.8□□□□□ -1.48
PTCH1-204ENST00000375290 ITPR1Q14643 2758 aa5.79□□□□□ -1.48
PTCH1-204ENST00000375290 MGAQ8IWI9 3026 aa5.79□□□□□ -1.48
PTCH1-204ENST00000375290 APCP25054 2843 aa5.78□□□□□ -1.48
PTCH1-204ENST00000375290 IGSF10Q6WRI0 2623 aa5.78□□□□□ -1.48
PTCH1-204ENST00000375290 LAMA2P24043 3122 aaKnown RBP5.78□□□□□ -1.48
PTCH1-204ENST00000375290 HTTP42858 3142 aa5.78□□□□□ -1.48
PTCH1-204ENST00000375290 Q6ZRN7 208 aaPredicted RBP5.77□□□□□ -1.49
PTCH1-204ENST00000375290 BAHCC1Q9P281 2608 aa5.77□□□□□ -1.49
PTCH1-204ENST00000375290 A8MUU9 505 aa5.76□□□□□ -1.49
PTCH1-204ENST00000375290 ADM2Q7Z4H4 148 aa5.76□□□□□ -1.49
PTCH1-204ENST00000375290 NIPBLQ6KC79 2804 aaeCLIP5.75□□□□□ -1.49
PTCH1-204ENST00000375290 FRYQ5TBA9 3013 aa5.75□□□□□ -1.49
PTCH1-204ENST00000375290 C20orf166-AS1Q96NR2 134 aa5.73□□□□□ -1.49
PTCH1-204ENST00000375290 KRTAP7-1Q8IUC3 87 aa5.73□□□□□ -1.49
PTCH1-204ENST00000375290 UTP20O75691 2785 aaKnown RBP5.72□□□□□ -1.49
PTCH1-204ENST00000375290 DSPP15924 2871 aaKnown RBP5.72□□□□□ -1.49
PTCH1-204ENST00000375290 PLAC4Q8WY50 150 aa5.72□□□□□ -1.49
PTCH1-204ENST00000375290 UBR5O95071 2799 aaPredicted RBP5.69□□□□□ -1.5
PTCH1-204ENST00000375290 NDUFAF8A1L188 74 aa5.69□□□□□ -1.5
PTCH1-204ENST00000375290 KRTAP10-1P60331 282 aa5.67□□□□□ -1.5
PTCH1-204ENST00000375290 VPS13AQ96RL7 3174 aa5.66□□□□□ -1.5
PTCH1-204ENST00000375290 FLNCQ14315 2725 aa5.66□□□□□ -1.5
PTCH1-204ENST00000375290 RANBP2P49792 3224 aaKnown RBP5.65□□□□□ -1.5
PTCH1-204ENST00000375290 M0R2T5 61 aa5.65□□□□□ -1.51
PTCH1-204ENST00000375290 Q5VSD8 79 aa5.65□□□□□ -1.51
PTCH1-204ENST00000375290 TNP1P09430 55 aa5.64□□□□□ -1.51
PTCH1-204ENST00000375290 KRTAP10-2P60368 255 aa5.62□□□□□ -1.51
PTCH1-204ENST00000375290 KRTAP13-2Q52LG2 175 aa5.61□□□□□ -1.51
PTCH1-204ENST00000375290 TRIOO75962 3097 aa5.6□□□□□ -1.51
PTCH1-204ENST00000375290 A8MU10 97 aa5.59□□□□□ -1.51
PTCH1-204ENST00000375290 KALRNO60229 2985 aa5.57□□□□□ -1.52
PTCH1-204ENST00000375290 NBEAQ8NFP9 2946 aa5.57□□□□□ -1.52
PTCH1-204ENST00000375290 MKI67P46013 3256 aaKnown RBP5.56□□□□□ -1.52
PTCH1-204ENST00000375290 H0YAA0 97 aa5.54□□□□□ -1.52
PTCH1-204ENST00000375290 WDFY4Q6ZS81 3184 aa5.53□□□□□ -1.52
PTCH1-204ENST00000375290 P0C880 135 aa5.53□□□□□ -1.52
PTCH1-204ENST00000375290 FRYLO94915 3013 aa5.52□□□□□ -1.53
PTCH1-204ENST00000375290 LAMA3Q16787 3333 aa5.51□□□□□ -1.53
PTCH1-204ENST00000375290 LRBAP50851 2863 aa5.5□□□□□ -1.53
PTCH1-204ENST00000375290 TACC2O95359 2948 aa5.47□□□□□ -1.53
PTCH1-204ENST00000375290 PRUNE2Q8WUY3 3088 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms