RNA–Protein interactions for RNA: ENST00000374695.7

HSPG2-203, Transcript of heparan sulfate proteoglycan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPG2, Length 14,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-203ENST00000374695 DSCR10P59022 87 aa5.56□□□□□ -1.52
HSPG2-203ENST00000374695 ZNF861PO60384 105 aa5.55□□□□□ -1.52
HSPG2-203ENST00000374695 J3QL48 77 aa5.55□□□□□ -1.52
HSPG2-203ENST00000374695 SETXQ7Z333 2677 aaKnown RBP5.55□□□□□ -1.52
HSPG2-203ENST00000374695 OCR1Q9BZK8 76 aa5.54□□□□□ -1.52
HSPG2-203ENST00000374695 H3BS24 57 aa5.54□□□□□ -1.52
HSPG2-203ENST00000374695 C10orf142B7Z368 130 aa5.54□□□□□ -1.52
HSPG2-203ENST00000374695 EIF4EBP3O60516 100 aaPredicted RBP5.54□□□□□ -1.52
HSPG2-203ENST00000374695 COL12A1Q99715 3063 aa5.54□□□□□ -1.52
HSPG2-203ENST00000374695 A0A1W2PPR1 153 aa5.54□□□□□ -1.52
HSPG2-203ENST00000374695 TLX1NBP0CAT3 122 aa5.54□□□□□ -1.52
HSPG2-203ENST00000374695 A0A087X002 238 aa5.53□□□□□ -1.52
HSPG2-203ENST00000374695 DMAC1Q96GE9 116 aa5.53□□□□□ -1.52
HSPG2-203ENST00000374695 ATMQ13315 3056 aa5.52□□□□□ -1.53
HSPG2-203ENST00000374695 IGLV5-37A0A075B6J1 123 aa5.52□□□□□ -1.53
HSPG2-203ENST00000374695 A0A0A0MQY5 61 aa5.51□□□□□ -1.53
HSPG2-203ENST00000374695 NSD1Q96L73 2696 aaPredicted RBP5.51□□□□□ -1.53
HSPG2-203ENST00000374695 VCANP13611 3396 aa5.51□□□□□ -1.53
HSPG2-203ENST00000374695 PRR34Q9NV39 138 aa5.51□□□□□ -1.53
HSPG2-203ENST00000374695 CSNK1G2-AS1Q8NCQ2 148 aa5.5□□□□□ -1.53
HSPG2-203ENST00000374695 Q8N377 158 aa5.5□□□□□ -1.53
HSPG2-203ENST00000374695 WWC2-AS2Q96NR7 200 aa5.49□□□□□ -1.53
HSPG2-203ENST00000374695 IGLV7-46A0A075B6I9 117 aa5.49□□□□□ -1.53
HSPG2-203ENST00000374695 A0A0D9SG42 100 aa5.49□□□□□ -1.53
HSPG2-203ENST00000374695 FP248Q71RG6 208 aaPredicted RBP5.48□□□□□ -1.53
HSPG2-203ENST00000374695 NBEAL2Q6ZNJ1 2754 aa5.48□□□□□ -1.53
HSPG2-203ENST00000374695 SZT2Q5T011 3432 aa5.47□□□□□ -1.53
HSPG2-203ENST00000374695 TNRC18O15417 2968 aaPredicted RBP5.47□□□□□ -1.53
HSPG2-203ENST00000374695 IGLV5-48A0A075B6I7 105 aa5.47□□□□□ -1.53
HSPG2-203ENST00000374695 C9orf92A6NGG3 77 aa5.47□□□□□ -1.53
HSPG2-203ENST00000374695 LINC01558Q9Y6Z2 57 aa5.46□□□□□ -1.54
HSPG2-203ENST00000374695 DCHS2Q6V1P9 2916 aa5.46□□□□□ -1.54
HSPG2-203ENST00000374695 CNBPP62633 177 aaKnown RBP5.46□□□□□ -1.54
HSPG2-203ENST00000374695 ITPR1Q14643 2758 aa5.45□□□□□ -1.54
HSPG2-203ENST00000374695 SPRR4Q96PI1 79 aa5.45□□□□□ -1.54
HSPG2-203ENST00000374695 A0A1B0GU33 70 aa5.45□□□□□ -1.54
HSPG2-203ENST00000374695 IGLV7-43P04211 117 aa5.44□□□□□ -1.54
HSPG2-203ENST00000374695 HRES1P13985 223 aa5.43□□□□□ -1.54
HSPG2-203ENST00000374695 Q8N9P0 234 aaPredicted RBP5.42□□□□□ -1.54
HSPG2-203ENST00000374695 CAMK2N1Q7Z7J9 78 aa5.42□□□□□ -1.54
HSPG2-203ENST00000374695 C9orf163Q8N9P6 203 aa5.42□□□□□ -1.54
HSPG2-203ENST00000374695 IGSF10Q6WRI0 2623 aa5.41□□□□□ -1.54
HSPG2-203ENST00000374695 Q8N1X5 172 aa5.41□□□□□ -1.54
HSPG2-203ENST00000374695 LRBAP50851 2863 aa5.4□□□□□ -1.54
HSPG2-203ENST00000374695 A0A087WTM6 91 aa5.4□□□□□ -1.54
HSPG2-203ENST00000374695 PSORS1C2Q9UIG4 136 aa5.4□□□□□ -1.55
HSPG2-203ENST00000374695 UBR5O95071 2799 aaPredicted RBP5.39□□□□□ -1.55
HSPG2-203ENST00000374695 Q5VV11 94 aa5.39□□□□□ -1.55
HSPG2-203ENST00000374695 LOC400499M0QZD8 3231 aa5.39□□□□□ -1.55
HSPG2-203ENST00000374695 LINC00612Q8N6U2 182 aa5.38□□□□□ -1.55
HSPG2-203ENST00000374695 CELSR2Q9HCU4 2923 aa5.37□□□□□ -1.55
HSPG2-203ENST00000374695 Q6ZSA8 131 aa5.37□□□□□ -1.55
HSPG2-203ENST00000374695 KRTAP24-1Q3LI83 254 aa5.36□□□□□ -1.55
HSPG2-203ENST00000374695 ZNF575Q86XF7 245 aa5.36□□□□□ -1.55
HSPG2-203ENST00000374695 C19orf73Q9NVV2 129 aa5.36□□□□□ -1.55
HSPG2-203ENST00000374695 A0A1W2PNM2 257 aa5.36□□□□□ -1.55
HSPG2-203ENST00000374695 FAM229BQ4G0N7 80 aa5.36□□□□□ -1.55
HSPG2-203ENST00000374695 CRYBG3Q68DQ2 2970 aa5.35□□□□□ -1.55
HSPG2-203ENST00000374695 PRR26Q8N8Z3 221 aa5.34□□□□□ -1.56
HSPG2-203ENST00000374695 S4R3F8 94 aa5.33□□□□□ -1.56
HSPG2-203ENST00000374695 TNP2Q05952 138 aa5.33□□□□□ -1.56
HSPG2-203ENST00000374695 GIG44P09565 113 aaPredicted RBP5.33□□□□□ -1.56
HSPG2-203ENST00000374695 KRTAP16-1A8MUX0 517 aa5.32□□□□□ -1.56
HSPG2-203ENST00000374695 K7EIL1 84 aa5.32□□□□□ -1.56
HSPG2-203ENST00000374695 A0A0G2JQZ4 141 aa5.31□□□□□ -1.56
HSPG2-203ENST00000374695 A0A1W2PNN7 141 aa5.31□□□□□ -1.56
HSPG2-203ENST00000374695 CSAG1Q6PB30 78 aa5.3□□□□□ -1.56
HSPG2-203ENST00000374695 KRTAP10-11P60412 298 aa5.3□□□□□ -1.56
HSPG2-203ENST00000374695 USP34Q70CQ2 3546 aa5.29□□□□□ -1.56
HSPG2-203ENST00000374695 ANAPC11Q9NYG5 84 aa5.29□□□□□ -1.56
HSPG2-203ENST00000374695 ZCCHC13Q8WW36 166 aaKnown RBP5.29□□□□□ -1.56
HSPG2-203ENST00000374695 ZANQ9Y493 2812 aa5.29□□□□□ -1.56
HSPG2-203ENST00000374695 SPINK7P58062 85 aa5.29□□□□□ -1.56
HSPG2-203ENST00000374695 NF1P21359 2839 aa5.28□□□□□ -1.56
HSPG2-203ENST00000374695 ROMO1P60602 79 aa5.26□□□□□ -1.57
HSPG2-203ENST00000374695 M0R2T5 61 aa5.25□□□□□ -1.57
HSPG2-203ENST00000374695 FBN2P35556 2912 aa5.25□□□□□ -1.57
HSPG2-203ENST00000374695 MYO15AQ9UKN7 3530 aa5.24□□□□□ -1.57
HSPG2-203ENST00000374695 CYSTM1Q9H1C7 97 aa5.23□□□□□ -1.57
HSPG2-203ENST00000374695 OXTP01178 125 aa5.23□□□□□ -1.57
HSPG2-203ENST00000374695 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.23□□□□□ -1.57
HSPG2-203ENST00000374695 SMR3BP02814 79 aaPredicted RBP5.22□□□□□ -1.57
HSPG2-203ENST00000374695 FLNCQ14315 2725 aa5.22□□□□□ -1.57
HSPG2-203ENST00000374695 RPL37P61927 97 aaKnown RBP5.22□□□□□ -1.57
HSPG2-203ENST00000374695 MMP24-AS1A0A0U1RRL7 71 aa5.22□□□□□ -1.57
HSPG2-203ENST00000374695 R4GN34 69 aa5.22□□□□□ -1.57
HSPG2-203ENST00000374695 SEC61BP60468 96 aaKnown RBP5.21□□□□□ -1.58
HSPG2-203ENST00000374695 DCHS1Q96JQ0 3298 aa5.21□□□□□ -1.58
HSPG2-203ENST00000374695 PRAC1Q96KF2 57 aa5.2□□□□□ -1.58
HSPG2-203ENST00000374695 NIPBLQ6KC79 2804 aaeCLIP5.2□□□□□ -1.581e-8■■■■■ 61.2
HSPG2-203ENST00000374695 Q5W150 140 aa5.2□□□□□ -1.58
HSPG2-203ENST00000374695 A6NN06 94 aa5.19□□□□□ -1.58
HSPG2-203ENST00000374695 A0A096LNT2 108 aa5.18□□□□□ -1.58
HSPG2-203ENST00000374695 SPATA8Q6RVD6 105 aa5.18□□□□□ -1.58
HSPG2-203ENST00000374695 CASC10Q5T4H9 136 aa5.16□□□□□ -1.58
HSPG2-203ENST00000374695 H1FX-AS1Q4G0G2 97 aa5.16□□□□□ -1.58
HSPG2-203ENST00000374695 CELSR1Q9NYQ6 3014 aa5.15□□□□□ -1.58
HSPG2-203ENST00000374695 LCE6AA0A183 80 aa5.15□□□□□ -1.58
HSPG2-203ENST00000374695 WDFY3Q8IZQ1 3526 aa5.15□□□□□ -1.58
HSPG2-203ENST00000374695 Q6ZR54 194 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms