RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 TRBV7-4A0A0J9YYF1 115 aa6.93□□□□□ -1.3
CXCL12-203ENST00000374429 Q9BRP9 147 aa6.93□□□□□ -1.3
CXCL12-203ENST00000374429 TRAV22A0A0B4J277 110 aa6.92□□□□□ -1.3
CXCL12-203ENST00000374429 REG3GQ6UW15 175 aa6.92□□□□□ -1.3
CXCL12-203ENST00000374429 Q8N377 158 aa6.92□□□□□ -1.3
CXCL12-203ENST00000374429 PANO1I0J062 215 aa6.91□□□□□ -1.3
CXCL12-203ENST00000374429 C1orf137Q5JT78 98 aa6.91□□□□□ -1.3
CXCL12-203ENST00000374429 KRTAP7-1Q8IUC3 87 aa6.9□□□□□ -1.3
CXCL12-203ENST00000374429 CMYA5Q8N3K9 4069 aa6.9□□□□□ -1.31
CXCL12-203ENST00000374429 APLNQ9ULZ1 77 aa6.89□□□□□ -1.31
CXCL12-203ENST00000374429 Q6ZRX8 168 aa6.89□□□□□ -1.31
CXCL12-203ENST00000374429 IGLV1-50A0A075B6I6 118 aa6.89□□□□□ -1.31
CXCL12-203ENST00000374429 NBDYA0A0U1RRE5 68 aa6.88□□□□□ -1.31
CXCL12-203ENST00000374429 KRTAP11-1Q8IUC1 163 aa6.88□□□□□ -1.31
CXCL12-203ENST00000374429 C1orf64Q8NEQ6 169 aa6.88□□□□□ -1.31
CXCL12-203ENST00000374429 B9D2Q9BPU9 175 aa6.88□□□□□ -1.31
CXCL12-203ENST00000374429 DNAH7Q8WXX0 4024 aa6.87□□□□□ -1.31
CXCL12-203ENST00000374429 hDV103S1A0JD37 113 aa6.87□□□□□ -1.31
CXCL12-203ENST00000374429 NDUFS5O43920 106 aa6.87□□□□□ -1.31
CXCL12-203ENST00000374429 WFDC13Q8IUB5 93 aa6.87□□□□□ -1.31
CXCL12-203ENST00000374429 A0A087WSZ3 146 aa6.87□□□□□ -1.31
CXCL12-203ENST00000374429 C8orf87E5RJ46 101 aa6.87□□□□□ -1.31
CXCL12-203ENST00000374429 RPL37AP61513 92 aaKnown RBP6.87□□□□□ -1.31
CXCL12-203ENST00000374429 Q1T7F1 81 aa6.87□□□□□ -1.31
CXCL12-203ENST00000374429 FAM30AQ9NZY2 134 aa6.87□□□□□ -1.31
CXCL12-203ENST00000374429 A6NED7 52 aa6.86□□□□□ -1.31
CXCL12-203ENST00000374429 KCNQ1DNQ9H478 68 aa6.86□□□□□ -1.31
CXCL12-203ENST00000374429 HCG22E2RYF7 251 aa6.85□□□□□ -1.31
CXCL12-203ENST00000374429 CXCL6P80162 114 aa6.84□□□□□ -1.31
CXCL12-203ENST00000374429 PRKDCP78527 4128 aaKnown RBP6.84□□□□□ -1.31
CXCL12-203ENST00000374429 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.84□□□□□ -1.32
CXCL12-203ENST00000374429 PRR15LQ9BU68 103 aa6.83□□□□□ -1.32
CXCL12-203ENST00000374429 DHRS4-AS1Q9P1J3 65 aa6.83□□□□□ -1.32
CXCL12-203ENST00000374429 SPINK6Q6UWN8 80 aa6.82□□□□□ -1.32
CXCL12-203ENST00000374429 LINC00476Q8WZB0 136 aa6.82□□□□□ -1.32
CXCL12-203ENST00000374429 NUPR2A6NF83 97 aa6.82□□□□□ -1.32
CXCL12-203ENST00000374429 C16orf90A8MZG2 172 aa6.81□□□□□ -1.32
CXCL12-203ENST00000374429 A0A1W2PNM2 257 aa6.81□□□□□ -1.32
CXCL12-203ENST00000374429 H0Y9J4 135 aa6.81□□□□□ -1.32
CXCL12-203ENST00000374429 PLECQ15149 4684 aaKnown RBP6.8□□□□□ -1.32
CXCL12-203ENST00000374429 DNAH9Q9NYC9 4486 aa6.8□□□□□ -1.32
CXCL12-203ENST00000374429 IGLV5-52A0A0A0MRZ9 124 aa6.78□□□□□ -1.32
CXCL12-203ENST00000374429 LOC110117498A0A087WWA1 95 aa6.78□□□□□ -1.32
CXCL12-203ENST00000374429 PDE6GP18545 87 aa6.78□□□□□ -1.32
CXCL12-203ENST00000374429 ATP11AUNQ6ZP68 121 aa6.77□□□□□ -1.33
CXCL12-203ENST00000374429 C7orf65Q6ZTY9 151 aa6.77□□□□□ -1.33
CXCL12-203ENST00000374429 RTL8CO15255 209 aa6.77□□□□□ -1.33
CXCL12-203ENST00000374429 LCA10Q71F78 164 aa6.77□□□□□ -1.33
CXCL12-203ENST00000374429 SMIM29Q86T20 159 aa6.77□□□□□ -1.33
CXCL12-203ENST00000374429 K7EQZ3 153 aa6.76□□□□□ -1.33
CXCL12-203ENST00000374429 KMT2AQ03164 3969 aa6.76□□□□□ -1.33
CXCL12-203ENST00000374429 C14orf177Q52M58 125 aa6.76□□□□□ -1.33
CXCL12-203ENST00000374429 Q5VV11 94 aa6.76□□□□□ -1.33
CXCL12-203ENST00000374429 IGFL1Q6UW32 110 aa6.76□□□□□ -1.33
CXCL12-203ENST00000374429 C9orf163Q8N9P6 203 aa6.75□□□□□ -1.33
CXCL12-203ENST00000374429 TNP2Q05952 138 aa6.75□□□□□ -1.33
CXCL12-203ENST00000374429 C1orf134Q5TEV5 83 aa6.75□□□□□ -1.33
CXCL12-203ENST00000374429 OCR1Q9BZK8 76 aa6.75□□□□□ -1.33
CXCL12-203ENST00000374429 A0A087WTM6 91 aa6.74□□□□□ -1.33
CXCL12-203ENST00000374429 TLX1NBP0CAT3 122 aa6.74□□□□□ -1.33
CXCL12-203ENST00000374429 STARD9Q9P2P6 4700 aa6.73□□□□□ -1.33
CXCL12-203ENST00000374429 PRR26Q8N8Z3 221 aa6.72□□□□□ -1.33
CXCL12-203ENST00000374429 CIRBP-AS1Q8TBR5 109 aa6.72□□□□□ -1.33
CXCL12-203ENST00000374429 MOBPQ13875 183 aa6.72□□□□□ -1.33
CXCL12-203ENST00000374429 Q8NBF4 154 aa6.72□□□□□ -1.33
CXCL12-203ENST00000374429 KRTAP4-16G5E9R7 235 aaPredicted RBP6.71□□□□□ -1.34
CXCL12-203ENST00000374429 LIMD2Q9BT23 127 aa6.7□□□□□ -1.34
CXCL12-203ENST00000374429 RETNLBQ9BQ08 111 aa6.7□□□□□ -1.34
CXCL12-203ENST00000374429 PSORS1C2Q9UIG4 136 aa6.7□□□□□ -1.34
CXCL12-203ENST00000374429 IGKV4-1P06312 121 aa6.69□□□□□ -1.34
CXCL12-203ENST00000374429 PRAC1Q96KF2 57 aa6.69□□□□□ -1.34
CXCL12-203ENST00000374429 CNBPP62633 177 aaKnown RBP6.69□□□□□ -1.34
CXCL12-203ENST00000374429 A6NN06 94 aa6.68□□□□□ -1.34
CXCL12-203ENST00000374429 FLG2Q5D862 2391 aaPredicted RBP6.67□□□□□ -1.34
CXCL12-203ENST00000374429 H3BQ85 93 aa6.67□□□□□ -1.34
CXCL12-203ENST00000374429 SPRR1AP35321 89 aa6.67□□□□□ -1.34
CXCL12-203ENST00000374429 LCE2DQ5TA82 110 aaPredicted RBP6.67□□□□□ -1.34
CXCL12-203ENST00000374429 SMR3BP02814 79 aaPredicted RBP6.67□□□□□ -1.34
CXCL12-203ENST00000374429 KRTAP10-2P60368 255 aa6.67□□□□□ -1.34
CXCL12-203ENST00000374429 IGHV6-1A0A0B4J1U7 121 aa6.66□□□□□ -1.34
CXCL12-203ENST00000374429 J3QL48 77 aa6.66□□□□□ -1.34
CXCL12-203ENST00000374429 IGLV5-48A0A075B6I7 105 aa6.66□□□□□ -1.34
CXCL12-203ENST00000374429 LINC00208Q96KT6 92 aa6.65□□□□□ -1.35
CXCL12-203ENST00000374429 PLA2G2DQ9UNK4 145 aa6.64□□□□□ -1.35
CXCL12-203ENST00000374429 DSCR10P59022 87 aa6.64□□□□□ -1.35
CXCL12-203ENST00000374429 Q8N9P0 234 aaPredicted RBP6.64□□□□□ -1.35
CXCL12-203ENST00000374429 KRTAP3-3Q9BYR6 98 aa6.64□□□□□ -1.35
CXCL12-203ENST00000374429 KRTAP3-2Q9BYR7 98 aa6.64□□□□□ -1.35
CXCL12-203ENST00000374429 CDK2AP2O75956 126 aa6.63□□□□□ -1.35
CXCL12-203ENST00000374429 Q6ZRN7 208 aaPredicted RBP6.63□□□□□ -1.35
CXCL12-203ENST00000374429 DNAH3Q8TD57 4116 aa6.63□□□□□ -1.35
CXCL12-203ENST00000374429 LINC01554Q52M75 96 aa6.63□□□□□ -1.35
CXCL12-203ENST00000374429 DMBT1Q9UGM3 2413 aaPredicted RBP6.63□□□□□ -1.35
CXCL12-203ENST00000374429 NDUFB1O75438 58 aa6.63□□□□□ -1.35
CXCL12-203ENST00000374429 MP68P56378 58 aa6.63□□□□□ -1.35
CXCL12-203ENST00000374429 CYP4F30PQ9H0H9 118 aa6.63□□□□□ -1.35
CXCL12-203ENST00000374429 IGLV5-37A0A075B6J1 123 aa6.62□□□□□ -1.35
CXCL12-203ENST00000374429 FRAS1Q86XX4 4008 aa6.62□□□□□ -1.35
CXCL12-203ENST00000374429 PCOTHQ58A44 107 aa6.61□□□□□ -1.35
CXCL12-203ENST00000374429 CDC42SE1Q9NRR8 79 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms