RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 IGLV7-43P04211 117 aa10.88□□□□□ -0.67
PTPRU-202ENST00000373779 LRBAP50851 2863 aa10.88□□□□□ -0.67
PTPRU-202ENST00000373779 UQCR11O14957 56 aa10.87□□□□□ -0.67
PTPRU-202ENST00000373779 USP34Q70CQ2 3546 aa10.87□□□□□ -0.67
PTPRU-202ENST00000373779 EYSQ5T1H1 3165 aa10.87□□□□□ -0.67
PTPRU-202ENST00000373779 KTN1-AS1Q86SY8 53 aa10.86□□□□□ -0.67
PTPRU-202ENST00000373779 PLA2G1BP04054 148 aaKnown RBP10.86□□□□□ -0.67
PTPRU-202ENST00000373779 IGLV7-46A0A075B6I9 117 aa10.84□□□□□ -0.67
PTPRU-202ENST00000373779 CD164Q04900 197 aa10.84□□□□□ -0.67
PTPRU-202ENST00000373779 FLNBO75369 2602 aaKnown RBP10.83□□□□□ -0.68
PTPRU-202ENST00000373779 CDC42SE1Q9NRR8 79 aa10.83□□□□□ -0.68
PTPRU-202ENST00000373779 HELZ2Q9BYK8 2649 aaKnown RBP10.82□□□□□ -0.68
PTPRU-202ENST00000373779 MMP24-AS1A0A0U1RRL7 71 aa10.81□□□□□ -0.68
PTPRU-202ENST00000373779 MIR22HGQ0VDD5 57 aa10.81□□□□□ -0.68
PTPRU-202ENST00000373779 ATMQ13315 3056 aa10.8□□□□□ -0.68
PTPRU-202ENST00000373779 MGAM2Q2M2H8 2515 aa10.8□□□□□ -0.68
PTPRU-202ENST00000373779 TNP2Q05952 138 aa10.79□□□□□ -0.68
PTPRU-202ENST00000373779 MYO15AQ9UKN7 3530 aa10.79□□□□□ -0.68
PTPRU-202ENST00000373779 TEX15Q9BXT5 2789 aa10.78□□□□□ -0.68
PTPRU-202ENST00000373779 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.78□□□□□ -0.68
PTPRU-202ENST00000373779 IGSF10Q6WRI0 2623 aa10.78□□□□□ -0.68
PTPRU-202ENST00000373779 SPRR1BP22528 89 aa10.77□□□□□ -0.69
PTPRU-202ENST00000373779 LINC00472Q9H8W2 130 aa10.76□□□□□ -0.69
PTPRU-202ENST00000373779 Q8N9P0 234 aaPredicted RBP10.75□□□□□ -0.69
PTPRU-202ENST00000373779 WWC2-AS2Q96NR7 200 aa10.74□□□□□ -0.69
PTPRU-202ENST00000373779 PRR26Q8N8Z3 221 aa10.74□□□□□ -0.69
PTPRU-202ENST00000373779 MAST4O15021 2626 aa10.74□□□□□ -0.69
PTPRU-202ENST00000373779 NBEAL2Q6ZNJ1 2754 aa10.74□□□□□ -0.69
PTPRU-202ENST00000373779 Q75L30 129 aa10.74□□□□□ -0.69
PTPRU-202ENST00000373779 TACC2O95359 2948 aa10.73□□□□□ -0.69
PTPRU-202ENST00000373779 KRTAP4-16G5E9R7 235 aaPredicted RBP10.73□□□□□ -0.69
PTPRU-202ENST00000373779 DMXL2Q8TDJ6 3036 aa10.71□□□□□ -0.69
PTPRU-202ENST00000373779 LINC00304Q8N9R0 145 aa10.71□□□□□ -0.7
PTPRU-202ENST00000373779 ZZEF1O43149 2961 aa10.71□□□□□ -0.7
PTPRU-202ENST00000373779 UNC79Q9P2D8 2635 aa10.69□□□□□ -0.7
PTPRU-202ENST00000373779 KRTAP1-5Q9BYS1 174 aa10.68□□□□□ -0.7
PTPRU-202ENST00000373779 LCA10Q71F78 164 aa10.67□□□□□ -0.7
PTPRU-202ENST00000373779 SETXQ7Z333 2677 aaKnown RBP10.66□□□□□ -0.7
PTPRU-202ENST00000373779 Q5VV11 94 aa10.66□□□□□ -0.7
PTPRU-202ENST00000373779 LINC01558Q9Y6Z2 57 aa10.66□□□□□ -0.7
PTPRU-202ENST00000373779 TNRC18O15417 2968 aaPredicted RBP10.65□□□□□ -0.7
PTPRU-202ENST00000373779 HRES1P13985 223 aa10.63□□□□□ -0.71
PTPRU-202ENST00000373779 C9orf92A6NGG3 77 aa10.62□□□□□ -0.71
PTPRU-202ENST00000373779 LOC400499M0QZD8 3231 aa10.61□□□□□ -0.71
PTPRU-202ENST00000373779 COL12A1Q99715 3063 aa10.6□□□□□ -0.71
PTPRU-202ENST00000373779 PLAC8Q9NZF1 115 aa10.6□□□□□ -0.71
PTPRU-202ENST00000373779 FLNCQ14315 2725 aa10.6□□□□□ -0.71
PTPRU-202ENST00000373779 ITPR1Q14643 2758 aa10.59□□□□□ -0.71
PTPRU-202ENST00000373779 Q8N1X5 172 aa10.59□□□□□ -0.71
PTPRU-202ENST00000373779 ZCCHC13Q8WW36 166 aaKnown RBP10.57□□□□□ -0.72
PTPRU-202ENST00000373779 KRTAP29-1A8MX34 341 aaPredicted RBP10.55□□□□□ -0.72
PTPRU-202ENST00000373779 HRNRQ86YZ3 2850 aaPredicted RBP10.53□□□□□ -0.72
PTPRU-202ENST00000373779 DMXL1Q9Y485 3027 aa10.52□□□□□ -0.72
PTPRU-202ENST00000373779 CFAP47Q6ZTR5 3102 aa10.51□□□□□ -0.73
PTPRU-202ENST00000373779 SMR3BP02814 79 aaPredicted RBP10.5□□□□□ -0.73
PTPRU-202ENST00000373779 TEP1Q99973 2627 aaKnown RBP10.49□□□□□ -0.73
PTPRU-202ENST00000373779 RBM12B-AS1Q9P1G2 102 aa10.48□□□□□ -0.73
PTPRU-202ENST00000373779 Q5W150 140 aa10.47□□□□□ -0.73
PTPRU-202ENST00000373779 LINC00483Q53H64 154 aa10.47□□□□□ -0.73
PTPRU-202ENST00000373779 UTP20O75691 2785 aaKnown RBP10.47□□□□□ -0.73
PTPRU-202ENST00000373779 SPINK7P58062 85 aa10.46□□□□□ -0.74
PTPRU-202ENST00000373779 KRTAP7-1Q8IUC3 87 aa10.45□□□□□ -0.74
PTPRU-202ENST00000373779 LCE6AA0A183 80 aa10.45□□□□□ -0.74
PTPRU-202ENST00000373779 UBR5O95071 2799 aaPredicted RBP10.44□□□□□ -0.74
PTPRU-202ENST00000373779 Q6ZR54 194 aa10.43□□□□□ -0.74
PTPRU-202ENST00000373779 PANO1I0J062 215 aa10.42□□□□□ -0.74
PTPRU-202ENST00000373779 SPINT4Q6UDR6 99 aa10.41□□□□□ -0.74
PTPRU-202ENST00000373779 NOTCH1P46531 2555 aa10.41□□□□□ -0.74
PTPRU-202ENST00000373779 WDFY3Q8IZQ1 3526 aa10.37□□□□□ -0.75
PTPRU-202ENST00000373779 KRTAP11-1Q8IUC1 163 aa10.36□□□□□ -0.75
PTPRU-202ENST00000373779 ZANQ9Y493 2812 aa10.32□□□□□ -0.76
PTPRU-202ENST00000373779 COL6A5A8TX70 2615 aa10.32□□□□□ -0.76
PTPRU-202ENST00000373779 DMAC1Q96GE9 116 aa10.31□□□□□ -0.76
PTPRU-202ENST00000373779 ASH1LQ9NR48 2969 aaKnown RBP10.31□□□□□ -0.76
PTPRU-202ENST00000373779 PRAC1Q96KF2 57 aa10.31□□□□□ -0.76
PTPRU-202ENST00000373779 A0A1B0GU33 70 aa10.3□□□□□ -0.76
PTPRU-202ENST00000373779 NBEAL1Q6ZS30 2694 aa10.3□□□□□ -0.76
PTPRU-202ENST00000373779 CRIPTQ9P021 101 aa10.28□□□□□ -0.76
PTPRU-202ENST00000373779 STAB1Q9NY15 2570 aa10.26□□□□□ -0.77
PTPRU-202ENST00000373779 A0A0D9SG42 100 aa10.26□□□□□ -0.77
PTPRU-202ENST00000373779 ITPR2Q14571 2701 aa10.25□□□□□ -0.77
PTPRU-202ENST00000373779 A0A087X002 238 aa10.25□□□□□ -0.77
PTPRU-202ENST00000373779 NOTCH2NLQ7Z3S9 236 aa10.25□□□□□ -0.77
PTPRU-202ENST00000373779 LINC01554Q52M75 96 aa10.23□□□□□ -0.77
PTPRU-202ENST00000373779 APCP25054 2843 aa10.23□□□□□ -0.77
PTPRU-202ENST00000373779 BAHCC1Q9P281 2608 aa10.2□□□□□ -0.78
PTPRU-202ENST00000373779 ZFHX4Q86UP3 3567 aa10.19□□□□□ -0.78
PTPRU-202ENST00000373779 KRTAP10-2P60368 255 aa10.18□□□□□ -0.78
PTPRU-202ENST00000373779 Q6ZRN7 208 aaPredicted RBP10.18□□□□□ -0.78
PTPRU-202ENST00000373779 KRTAP13-1Q8IUC0 172 aa10.18□□□□□ -0.78
PTPRU-202ENST00000373779 KRTAP10-1P60331 282 aa10.16□□□□□ -0.78
PTPRU-202ENST00000373779 CSAG1Q6PB30 78 aa10.12□□□□□ -0.79
PTPRU-202ENST00000373779 NSD1Q96L73 2696 aaPredicted RBP10.1□□□□□ -0.79
PTPRU-202ENST00000373779 DCHS1Q96JQ0 3298 aa10.1□□□□□ -0.79
PTPRU-202ENST00000373779 ASB16-AS1Q495Z4 193 aa10.09□□□□□ -0.79
PTPRU-202ENST00000373779 RELNP78509 3460 aa10.09□□□□□ -0.79
PTPRU-202ENST00000373779 FBN2P35556 2912 aa10.09□□□□□ -0.79
PTPRU-202ENST00000373779 KMT2BQ9UMN6 2715 aaPredicted RBP10.09□□□□□ -0.79
PTPRU-202ENST00000373779 DMDP11532 3685 aa10.08□□□□□ -0.8
PTPRU-202ENST00000373779 CELSR2Q9HCU4 2923 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms