RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 PPDPFLQ8WWR9 84 aa10.62□□□□□ -0.71
PBX3-202ENST00000373482 FAM218AQ96MZ4 157 aa10.62□□□□□ -0.71
PBX3-202ENST00000373482 SMIM29Q86T20 159 aa10.61□□□□□ -0.71
PBX3-202ENST00000373482 F8WEM9 126 aa10.6□□□□□ -0.71
PBX3-202ENST00000373482 GHRHP01286 108 aa10.6□□□□□ -0.71
PBX3-202ENST00000373482 CLEC2BQ92478 149 aa10.6□□□□□ -0.71
PBX3-202ENST00000373482 SPINK1P00995 79 aa10.59□□□□□ -0.71
PBX3-202ENST00000373482 SCGB1C2P0DMR2 95 aa10.59□□□□□ -0.71
PBX3-202ENST00000373482 DNAL4O96015 105 aa10.58□□□□□ -0.72
PBX3-202ENST00000373482 BATFQ16520 125 aa10.58□□□□□ -0.72
PBX3-202ENST00000373482 SNHG12Q9BXW3 62 aa10.57□□□□□ -0.72
PBX3-202ENST00000373482 RPS29P62273 56 aaKnown RBP10.54□□□□□ -0.72
PBX3-202ENST00000373482 PRR4Q16378 134 aa10.52□□□□□ -0.73
PBX3-202ENST00000373482 H3BQ85 93 aa10.51□□□□□ -0.73
PBX3-202ENST00000373482 ORMDL1Q9P0S3 153 aa10.51□□□□□ -0.73
PBX3-202ENST00000373482 HRCT1Q6UXD1 115 aa10.5□□□□□ -0.73
PBX3-202ENST00000373482 TRACP01848 142 aa10.49□□□□□ -0.73
PBX3-202ENST00000373482 FABP2P12104 132 aa10.49□□□□□ -0.73
PBX3-202ENST00000373482 CD164Q04900 197 aa10.49□□□□□ -0.73
PBX3-202ENST00000373482 Q6JHZ5 121 aa10.49□□□□□ -0.73
PBX3-202ENST00000373482 RETNLBQ9BQ08 111 aa10.49□□□□□ -0.73
PBX3-202ENST00000373482 NAA38Q9BRA0 125 aaKnown RBP10.49□□□□□ -0.73
PBX3-202ENST00000373482 LST1O00453 97 aa10.48□□□□□ -0.73
PBX3-202ENST00000373482 LYRM7Q5U5X0 104 aa10.48□□□□□ -0.73
PBX3-202ENST00000373482 IGLV8-61A0A075B6I0 122 aa10.47□□□□□ -0.73
PBX3-202ENST00000373482 NDUFV3P56181 108 aaKnown RBP10.47□□□□□ -0.73
PBX3-202ENST00000373482 LIMD2Q9BT23 127 aa10.47□□□□□ -0.73
PBX3-202ENST00000373482 TMEM256-PLSCR3K7ERE1 68 aa10.46□□□□□ -0.73
PBX3-202ENST00000373482 HMCN2Q8NDA2 5059 aa10.45□□□□□ -0.74
PBX3-202ENST00000373482 A0A0G2JQZ4 141 aa10.44□□□□□ -0.74
PBX3-202ENST00000373482 ATXN8Q156A1 80 aa10.44□□□□□ -0.74
PBX3-202ENST00000373482 H3BUT2 72 aa10.43□□□□□ -0.74
PBX3-202ENST00000373482 IGFL1Q6UW32 110 aa10.43□□□□□ -0.74
PBX3-202ENST00000373482 C9orf118A6NHY6 69 aa10.41□□□□□ -0.74
PBX3-202ENST00000373482 H3BMG7 143 aa10.41□□□□□ -0.74
PBX3-202ENST00000373482 TCL1BO95988 128 aa10.41□□□□□ -0.74
PBX3-202ENST00000373482 FP248Q71RG6 208 aaPredicted RBP10.41□□□□□ -0.74
PBX3-202ENST00000373482 TAX1BP3O14907 124 aa10.4□□□□□ -0.74
PBX3-202ENST00000373482 TRBV20-1A0A075B6N2 111 aa10.39□□□□□ -0.75
PBX3-202ENST00000373482 IGLV7-46A0A075B6I9 117 aa10.38□□□□□ -0.75
PBX3-202ENST00000373482 PCP4L1A6NKN8 68 aa10.38□□□□□ -0.75
PBX3-202ENST00000373482 UBE2V1Q13404 147 aa10.38□□□□□ -0.75
PBX3-202ENST00000373482 Q5XG85 94 aa10.36□□□□□ -0.75
PBX3-202ENST00000373482 BAALC-AS2P0C853 105 aa10.35□□□□□ -0.75
PBX3-202ENST00000373482 COL5A1-AS1Q5SY13 56 aa10.35□□□□□ -0.75
PBX3-202ENST00000373482 TRBV7-7A0A0K0K1E9 115 aa10.34□□□□□ -0.75
PBX3-202ENST00000373482 A0A1W2PPM0 123 aa10.34□□□□□ -0.75
PBX3-202ENST00000373482 A0A1B0GV72 72 aa10.32□□□□□ -0.76
PBX3-202ENST00000373482 TEN1Q86WV5 123 aa10.32□□□□□ -0.76
PBX3-202ENST00000373482 ANKRD29Q8N6D5 301 aa10.32□□□□□ -0.76
PBX3-202ENST00000373482 Q6Q795 121 aa10.31□□□□□ -0.76
PBX3-202ENST00000373482 TPRXLQ17RH7 258 aa10.3□□□□□ -0.76
PBX3-202ENST00000373482 C9JAW5 83 aa10.28□□□□□ -0.76
PBX3-202ENST00000373482 RBM3P98179 157 aaKnown RBP10.28□□□□□ -0.76
PBX3-202ENST00000373482 LPAP08519 4548 aa10.28□□□□□ -0.76
PBX3-202ENST00000373482 ASB16-AS1Q495Z4 193 aa10.26□□□□□ -0.77
PBX3-202ENST00000373482 DSCR8Q96T75 97 aa10.26□□□□□ -0.77
PBX3-202ENST00000373482 SS18L2Q9UHA2 77 aa10.26□□□□□ -0.77
PBX3-202ENST00000373482 LRP2P98164 4655 aa10.25□□□□□ -0.77
PBX3-202ENST00000373482 C1orf195Q5TG92 126 aa10.25□□□□□ -0.77
PBX3-202ENST00000373482 CDIP1Q9H305 208 aa10.25□□□□□ -0.77
PBX3-202ENST00000373482 JMJD7-PLA2G4BH0Y9G9 81 aa10.24□□□□□ -0.77
PBX3-202ENST00000373482 SPCS1Q9Y6A9 102 aa10.24□□□□□ -0.77
PBX3-202ENST00000373482 TRBV7-4A0A0J9YYF1 115 aa10.23□□□□□ -0.77
PBX3-202ENST00000373482 A0A1W2PNM2 257 aa10.23□□□□□ -0.77
PBX3-202ENST00000373482 CCKP06307 115 aa10.23□□□□□ -0.77
PBX3-202ENST00000373482 A0A087WSZ3 146 aa10.22□□□□□ -0.77
PBX3-202ENST00000373482 KRTAP13-3Q3SY46 172 aa10.22□□□□□ -0.77
PBX3-202ENST00000373482 H3BT86 120 aa10.2□□□□□ -0.78
PBX3-202ENST00000373482 VPS25Q9BRG1 176 aa10.19□□□□□ -0.78
PBX3-202ENST00000373482 MTURNQ8N3F0 131 aa10.17□□□□□ -0.78
PBX3-202ENST00000373482 PDE6GP18545 87 aa10.15□□□□□ -0.78
PBX3-202ENST00000373482 LOC110117498A0A087WWA1 95 aa10.13□□□□□ -0.79
PBX3-202ENST00000373482 K7EP34 96 aa10.13□□□□□ -0.79
PBX3-202ENST00000373482 C21orf62-AS1Q17RA5 79 aa10.13□□□□□ -0.79
PBX3-202ENST00000373482 C14orf132Q9NPU4 83 aa10.12□□□□□ -0.79
PBX3-202ENST00000373482 UBR4Q5T4S7 5183 aa10.12□□□□□ -0.79
PBX3-202ENST00000373482 C9orf92A6NGG3 77 aa10.11□□□□□ -0.79
PBX3-202ENST00000373482 Q6ZQT0 140 aa10.11□□□□□ -0.79
PBX3-202ENST00000373482 GTF2H5Q6ZYL4 71 aa10.11□□□□□ -0.79
PBX3-202ENST00000373482 OBSCN-AS1Q96MR7 158 aa10.11□□□□□ -0.79
PBX3-202ENST00000373482 A0A1B0GW54 56 aa10.07□□□□□ -0.8
PBX3-202ENST00000373482 Q96NJ1 140 aa10.07□□□□□ -0.8
PBX3-202ENST00000373482 XP32Q5T750 250 aa10.06□□□□□ -0.8
PBX3-202ENST00000373482 SIGMAR1Q99720 223 aa10.04□□□□□ -0.8
PBX3-202ENST00000373482 IGKV4-1P06312 121 aa10.03□□□□□ -0.8
PBX3-202ENST00000373482 SMCPP49901 116 aaPredicted RBP10.03□□□□□ -0.8
PBX3-202ENST00000373482 LINC00472Q9H8W2 130 aa10.01□□□□□ -0.81
PBX3-202ENST00000373482 PRO0461Q9UI25 63 aa10.01□□□□□ -0.81
PBX3-202ENST00000373482 SEC61BP60468 96 aaKnown RBP10□□□□□ -0.81
PBX3-202ENST00000373482 F8W1H4 67 aa9.98□□□□□ -0.81
PBX3-202ENST00000373482 DEFB116Q30KQ4 102 aa9.98□□□□□ -0.81
PBX3-202ENST00000373482 J3KT08 172 aa9.96□□□□□ -0.82
PBX3-202ENST00000373482 NREPQ16612 68 aa9.93□□□□□ -0.82
PBX3-202ENST00000373482 LCE2DQ5TA82 110 aaPredicted RBP9.92□□□□□ -0.82
PBX3-202ENST00000373482 MUC17Q685J3 4493 aa9.91□□□□□ -0.82
PBX3-202ENST00000373482 LINC00313P59037 77 aa9.89□□□□□ -0.83
PBX3-202ENST00000373482 RPL37P61927 97 aaKnown RBP9.89□□□□□ -0.83
PBX3-202ENST00000373482 RNF213Q63HN8 5207 aa9.89□□□□□ -0.83
PBX3-202ENST00000373482 IGHV6-1A0A0B4J1U7 121 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 243 ms