RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 H1FX-AS1Q4G0G2 97 aa5.38□□□□□ -1.55
NCKAP1-202ENST00000361354 C19orf73Q9NVV2 129 aa5.38□□□□□ -1.55
NCKAP1-202ENST00000361354 CNBPP62633 177 aaKnown RBP5.37□□□□□ -1.55
NCKAP1-202ENST00000361354 ASB16-AS1Q495Z4 193 aa5.37□□□□□ -1.55
NCKAP1-202ENST00000361354 EIF4EBP3O60516 100 aaPredicted RBP5.37□□□□□ -1.55
NCKAP1-202ENST00000361354 TNP2Q05952 138 aa5.37□□□□□ -1.55
NCKAP1-202ENST00000361354 A0A087WTM6 91 aa5.37□□□□□ -1.55
NCKAP1-202ENST00000361354 RPL37P61927 97 aaKnown RBP5.36□□□□□ -1.55
NCKAP1-202ENST00000361354 FP248Q71RG6 208 aaPredicted RBP5.34□□□□□ -1.55
NCKAP1-202ENST00000361354 ITPR1Q14643 2758 aa5.34□□□□□ -1.55
NCKAP1-202ENST00000361354 UBR5O95071 2799 aaPredicted RBP5.34□□□□□ -1.55
NCKAP1-202ENST00000361354 NBEAL2Q6ZNJ1 2754 aa5.34□□□□□ -1.55
NCKAP1-202ENST00000361354 ZCCHC13Q8WW36 166 aaKnown RBP5.34□□□□□ -1.55
NCKAP1-202ENST00000361354 PLAC4Q8WY50 150 aa5.33□□□□□ -1.56
NCKAP1-202ENST00000361354 SMR3BP02814 79 aaPredicted RBP5.33□□□□□ -1.56
NCKAP1-202ENST00000361354 LINC00612Q8N6U2 182 aa5.31□□□□□ -1.56
NCKAP1-202ENST00000361354 DNAH12Q6ZR08 3092 aa5.29□□□□□ -1.56
NCKAP1-202ENST00000361354 GIG44P09565 113 aaPredicted RBP5.29□□□□□ -1.56
NCKAP1-202ENST00000361354 KLK9Q2XQG4 91 aa5.29□□□□□ -1.56
NCKAP1-202ENST00000361354 Q5W150 140 aa5.28□□□□□ -1.56
NCKAP1-202ENST00000361354 KRTAP24-1Q3LI83 254 aa5.28□□□□□ -1.56
NCKAP1-202ENST00000361354 TRANK1O15050 2925 aa5.28□□□□□ -1.56
NCKAP1-202ENST00000361354 SRCAPQ6ZRS2 3230 aa5.26□□□□□ -1.57
NCKAP1-202ENST00000361354 MMP24-AS1A0A0U1RRL7 71 aa5.26□□□□□ -1.57
NCKAP1-202ENST00000361354 CFAP54Q96N23 3096 aa5.26□□□□□ -1.57
NCKAP1-202ENST00000361354 M0QZ58 72 aa5.24□□□□□ -1.57
NCKAP1-202ENST00000361354 LRBAP50851 2863 aa5.24□□□□□ -1.57
NCKAP1-202ENST00000361354 K7EIL1 84 aa5.24□□□□□ -1.57
NCKAP1-202ENST00000361354 DSPP15924 2871 aaKnown RBP5.23□□□□□ -1.57
NCKAP1-202ENST00000361354 KRTAP10-11P60412 298 aa5.22□□□□□ -1.57
NCKAP1-202ENST00000361354 PCNTO95613 3336 aa5.21□□□□□ -1.58
NCKAP1-202ENST00000361354 A0A0C4DFX4 3053 aa5.2□□□□□ -1.58
NCKAP1-202ENST00000361354 C20orf166-AS1Q96NR2 134 aa5.19□□□□□ -1.58
NCKAP1-202ENST00000361354 CYSTM1Q9H1C7 97 aa5.18□□□□□ -1.58
NCKAP1-202ENST00000361354 SEC61BP60468 96 aaKnown RBP5.18□□□□□ -1.58
NCKAP1-202ENST00000361354 C5orf42Q9H799 3197 aa5.17□□□□□ -1.58
NCKAP1-202ENST00000361354 LAMA2P24043 3122 aaKnown RBP5.16□□□□□ -1.58
NCKAP1-202ENST00000361354 CASC10Q5T4H9 136 aa5.16□□□□□ -1.58
NCKAP1-202ENST00000361354 C10orf142B7Z368 130 aa5.16□□□□□ -1.58
NCKAP1-202ENST00000361354 NDUFAF8A1L188 74 aa5.15□□□□□ -1.59
NCKAP1-202ENST00000361354 CHD9Q3L8U1 2897 aa5.15□□□□□ -1.59
NCKAP1-202ENST00000361354 KRTAP25-1Q3LHN0 102 aa5.15□□□□□ -1.59
NCKAP1-202ENST00000361354 Q8NDZ9 215 aa5.15□□□□□ -1.59
NCKAP1-202ENST00000361354 LINC00472Q9H8W2 130 aa5.13□□□□□ -1.59
NCKAP1-202ENST00000361354 FLNCQ14315 2725 aa5.13□□□□□ -1.59
NCKAP1-202ENST00000361354 A0A096LNT2 108 aa5.13□□□□□ -1.59
NCKAP1-202ENST00000361354 EP400Q96L91 3159 aa5.13□□□□□ -1.59
NCKAP1-202ENST00000361354 PANO1I0J062 215 aa5.12□□□□□ -1.59
NCKAP1-202ENST00000361354 KALRNO60229 2985 aa5.12□□□□□ -1.59
NCKAP1-202ENST00000361354 ADM2Q7Z4H4 148 aa5.12□□□□□ -1.59
NCKAP1-202ENST00000361354 TENM3Q9P273 2699 aa5.12□□□□□ -1.59
NCKAP1-202ENST00000361354 SPATA8Q6RVD6 105 aa5.1□□□□□ -1.59
NCKAP1-202ENST00000361354 Q6ZR54 194 aa5.1□□□□□ -1.59
NCKAP1-202ENST00000361354 NF1P21359 2839 aa5.1□□□□□ -1.59
NCKAP1-202ENST00000361354 FRYLO94915 3013 aa5.08□□□□□ -1.6
NCKAP1-202ENST00000361354 OXTP01178 125 aa5.08□□□□□ -1.6
NCKAP1-202ENST00000361354 PLAC8Q9NZF1 115 aa5.07□□□□□ -1.6
NCKAP1-202ENST00000361354 ASH1LQ9NR48 2969 aaKnown RBP5.07□□□□□ -1.6
NCKAP1-202ENST00000361354 SPRR1AP35321 89 aa5.06□□□□□ -1.6
NCKAP1-202ENST00000361354 A6NN06 94 aa5.06□□□□□ -1.6
NCKAP1-202ENST00000361354 TRIOO75962 3097 aa5.05□□□□□ -1.6
NCKAP1-202ENST00000361354 TENM1Q9UKZ4 2725 aa5.04□□□□□ -1.6
NCKAP1-202ENST00000361354 CHD7Q9P2D1 2997 aa5.04□□□□□ -1.6
NCKAP1-202ENST00000361354 SPRR1BP22528 89 aa5.04□□□□□ -1.6
NCKAP1-202ENST00000361354 KRTAP26-1Q6PEX3 210 aa5.03□□□□□ -1.6
NCKAP1-202ENST00000361354 FRYQ5TBA9 3013 aa5.01□□□□□ -1.61
NCKAP1-202ENST00000361354 CELSR2Q9HCU4 2923 aa5□□□□□ -1.61
NCKAP1-202ENST00000361354 C10orf95Q9H7T3 257 aa5□□□□□ -1.61
NCKAP1-202ENST00000361354 HIVEP1P15822 2718 aa4.99□□□□□ -1.61
NCKAP1-202ENST00000361354 MGAQ8IWI9 3026 aa4.98□□□□□ -1.61
NCKAP1-202ENST00000361354 GOLGB1Q14789 3259 aaKnown RBP4.97□□□□□ -1.61
NCKAP1-202ENST00000361354 KRTAP10-3P60369 221 aa4.97□□□□□ -1.61
NCKAP1-202ENST00000361354 NIPBLQ6KC79 2804 aaeCLIP4.96□□□□□ -1.62
NCKAP1-202ENST00000361354 A8MUU9 505 aa4.95□□□□□ -1.62
NCKAP1-202ENST00000361354 Q5VSD8 79 aa4.95□□□□□ -1.62
NCKAP1-202ENST00000361354 A0A087X002 238 aa4.95□□□□□ -1.62
NCKAP1-202ENST00000361354 CRYBG3Q68DQ2 2970 aa4.94□□□□□ -1.62
NCKAP1-202ENST00000361354 PDZD2O15018 2839 aa4.94□□□□□ -1.62
NCKAP1-202ENST00000361354 TNP1P09430 55 aa4.94□□□□□ -1.62
NCKAP1-202ENST00000361354 COL12A1Q99715 3063 aa4.92□□□□□ -1.62
NCKAP1-202ENST00000361354 A8MU10 97 aa4.91□□□□□ -1.62
NCKAP1-202ENST00000361354 PP632Q6XCG6 107 aa4.91□□□□□ -1.62
NCKAP1-202ENST00000361354 PRUNE2Q8WUY3 3088 aa4.9□□□□□ -1.62
NCKAP1-202ENST00000361354 TGP01266 2768 aa4.9□□□□□ -1.63
NCKAP1-202ENST00000361354 KRTAP29-1A8MX34 341 aaPredicted RBP4.89□□□□□ -1.63
NCKAP1-202ENST00000361354 DMXL2Q8TDJ6 3036 aa4.89□□□□□ -1.63
NCKAP1-202ENST00000361354 FREM2Q5SZK8 3169 aa4.88□□□□□ -1.63
NCKAP1-202ENST00000361354 SRRM2Q9UQ35 2752 aaKnown RBP4.87□□□□□ -1.63
NCKAP1-202ENST00000361354 RPS29P62273 56 aaKnown RBP4.83□□□□□ -1.64
NCKAP1-202ENST00000361354 VPS13AQ96RL7 3174 aa4.83□□□□□ -1.64
NCKAP1-202ENST00000361354 TNRC18O15417 2968 aaPredicted RBP4.83□□□□□ -1.64
NCKAP1-202ENST00000361354 KRTAP11-1Q8IUC1 163 aa4.82□□□□□ -1.64
NCKAP1-202ENST00000361354 TACC2O95359 2948 aa4.81□□□□□ -1.64
NCKAP1-202ENST00000361354 LCE6AA0A183 80 aa4.79□□□□□ -1.64
NCKAP1-202ENST00000361354 UTRNP46939 3433 aa4.79□□□□□ -1.64
NCKAP1-202ENST00000361354 KRTAP4-16G5E9R7 235 aaPredicted RBP4.79□□□□□ -1.64
NCKAP1-202ENST00000361354 NOTCH2NLQ7Z3S9 236 aa4.78□□□□□ -1.64
NCKAP1-202ENST00000361354 LAMA1P25391 3075 aa4.76□□□□□ -1.65
NCKAP1-202ENST00000361354 P0C880 135 aa4.76□□□□□ -1.65
NCKAP1-202ENST00000361354 KRTAP1-3Q8IUG1 177 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms