RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 TRAV7A0A075B6U4 112 aa12.43□□□□□ -0.42
CHD1L-201ENST00000361293 BCE1O60756 84 aa12.43□□□□□ -0.42
CHD1L-201ENST00000361293 C20orf197Q8N268 126 aa12.42□□□□□ -0.42
CHD1L-201ENST00000361293 H0Y9J4 135 aa12.42□□□□□ -0.42
CHD1L-201ENST00000361293 SPACA4Q8TDM5 124 aa12.42□□□□□ -0.42
CHD1L-201ENST00000361293 PKIGQ9Y2B9 76 aa12.42□□□□□ -0.42
CHD1L-201ENST00000361293 TGP01266 2768 aa12.41□□□□□ -0.42
CHD1L-201ENST00000361293 Q6ZR54 194 aa12.41□□□□□ -0.42
CHD1L-201ENST00000361293 UBE2AP49459 152 aa12.4□□□□□ -0.42
CHD1L-201ENST00000361293 HECTD4Q9Y4D8 3996 aa12.4□□□□□ -0.43
CHD1L-201ENST00000361293 DNAH2Q9P225 4427 aa12.39□□□□□ -0.43
CHD1L-201ENST00000361293 IGLV8-61A0A075B6I0 122 aa12.39□□□□□ -0.43
CHD1L-201ENST00000361293 SMIM20Q8N5G0 67 aa12.38□□□□□ -0.43
CHD1L-201ENST00000361293 FBN3Q75N90 2809 aa12.37□□□□□ -0.43
CHD1L-201ENST00000361293 KRTAP13-1Q8IUC0 172 aa12.36□□□□□ -0.43
CHD1L-201ENST00000361293 RTL8CO15255 209 aa12.35□□□□□ -0.43
CHD1L-201ENST00000361293 SPRR1BP22528 89 aa12.35□□□□□ -0.43
CHD1L-201ENST00000361293 DSCR10P59022 87 aa12.35□□□□□ -0.43
CHD1L-201ENST00000361293 A0A087WSZ3 146 aa12.32□□□□□ -0.44
CHD1L-201ENST00000361293 K7EQZ3 153 aa12.31□□□□□ -0.44
CHD1L-201ENST00000361293 TMEM258P61165 79 aa12.31□□□□□ -0.44
CHD1L-201ENST00000361293 SNURFQ9Y675 71 aa12.31□□□□□ -0.44
CHD1L-201ENST00000361293 DEFB116Q30KQ4 102 aa12.31□□□□□ -0.44
CHD1L-201ENST00000361293 OCR1Q9BZK8 76 aa12.28□□□□□ -0.44
CHD1L-201ENST00000361293 DNAH17Q9UFH2 4485 aa12.27□□□□□ -0.44
CHD1L-201ENST00000361293 KLKP1Q107X0 134 aa12.27□□□□□ -0.45
CHD1L-201ENST00000361293 LY6G6CO95867 125 aa12.26□□□□□ -0.45
CHD1L-201ENST00000361293 C1orf134Q5TEV5 83 aa12.26□□□□□ -0.45
CHD1L-201ENST00000361293 H7BZZ5 65 aa12.25□□□□□ -0.45
CHD1L-201ENST00000361293 FRAS1Q86XX4 4008 aa12.23□□□□□ -0.45
CHD1L-201ENST00000361293 PSORS1C2Q9UIG4 136 aa12.23□□□□□ -0.45
CHD1L-201ENST00000361293 IGLV5-52A0A0A0MRZ9 124 aa12.22□□□□□ -0.45
CHD1L-201ENST00000361293 PLAC8Q9NZF1 115 aa12.21□□□□□ -0.45
CHD1L-201ENST00000361293 TMEM254Q8TBM7 123 aa12.19□□□□□ -0.46
CHD1L-201ENST00000361293 FAM30AQ9NZY2 134 aa12.19□□□□□ -0.46
CHD1L-201ENST00000361293 DNAH8Q96JB1 4490 aa12.19□□□□□ -0.46
CHD1L-201ENST00000361293 RPL37AP61513 92 aaKnown RBP12.19□□□□□ -0.46
CHD1L-201ENST00000361293 IGLV9-49A0A0B4J1Y8 123 aa12.17□□□□□ -0.46
CHD1L-201ENST00000361293 J3KT08 172 aa12.16□□□□□ -0.46
CHD1L-201ENST00000361293 DNAH6Q9C0G6 4158 aa12.14□□□□□ -0.47
CHD1L-201ENST00000361293 HCG22E2RYF7 251 aa12.14□□□□□ -0.47
CHD1L-201ENST00000361293 OXTP01178 125 aa12.14□□□□□ -0.47
CHD1L-201ENST00000361293 LINC00483Q53H64 154 aa12.13□□□□□ -0.47
CHD1L-201ENST00000361293 ANAPC11Q9NYG5 84 aa12.13□□□□□ -0.47
CHD1L-201ENST00000361293 FAM236DA0A1B0GTK5 79 aa12.12□□□□□ -0.47
CHD1L-201ENST00000361293 FAM236CP0DP71 79 aa12.12□□□□□ -0.47
CHD1L-201ENST00000361293 LINC00472Q9H8W2 130 aa12.12□□□□□ -0.47
CHD1L-201ENST00000361293 RPS28P62857 69 aaKnown RBP12.11□□□□□ -0.47
CHD1L-201ENST00000361293 A0A0U1RQV1 116 aa12.11□□□□□ -0.47
CHD1L-201ENST00000361293 KRTAP10-2P60368 255 aa12.1□□□□□ -0.47
CHD1L-201ENST00000361293 WFDC13Q8IUB5 93 aa12.1□□□□□ -0.47
CHD1L-201ENST00000361293 ZNF861PO60384 105 aa12.09□□□□□ -0.47
CHD1L-201ENST00000361293 WWC2-AS2Q96NR7 200 aa12.09□□□□□ -0.47
CHD1L-201ENST00000361293 HRCT1Q6UXD1 115 aa12.06□□□□□ -0.48
CHD1L-201ENST00000361293 LCE6AA0A183 80 aa12.05□□□□□ -0.48
CHD1L-201ENST00000361293 ZNF706Q9Y5V0 76 aaPredicted RBP12.05□□□□□ -0.48
CHD1L-201ENST00000361293 NDUFC1O43677 76 aa12.04□□□□□ -0.48
CHD1L-201ENST00000361293 MOBPQ13875 183 aa12.04□□□□□ -0.48
CHD1L-201ENST00000361293 PRR15Q8IV56 129 aa12.04□□□□□ -0.48
CHD1L-201ENST00000361293 DNAH5Q8TE73 4624 aa12.04□□□□□ -0.48
CHD1L-201ENST00000361293 A8MWP4 228 aa12.03□□□□□ -0.48
CHD1L-201ENST00000361293 DNAH11Q96DT5 4516 aa12.03□□□□□ -0.48
CHD1L-201ENST00000361293 HYDINQ4G0P3 5121 aa12.02□□□□□ -0.48
CHD1L-201ENST00000361293 KRTAP29-1A8MX34 341 aaPredicted RBP12.02□□□□□ -0.49
CHD1L-201ENST00000361293 CIRBP-AS1Q8TBR5 109 aa12.01□□□□□ -0.49
CHD1L-201ENST00000361293 Q96NJ1 140 aa12.01□□□□□ -0.49
CHD1L-201ENST00000361293 IGLV7-43P04211 117 aa12□□□□□ -0.49
CHD1L-201ENST00000361293 ALMS1Q8TCU4 4167 aa11.98□□□□□ -0.49
CHD1L-201ENST00000361293 CASC2Q6XLA1 102 aa11.97□□□□□ -0.49
CHD1L-201ENST00000361293 PKD1P98161 4303 aa11.95□□□□□ -0.5
CHD1L-201ENST00000361293 FAT2Q9NYQ8 4349 aa11.94□□□□□ -0.5
CHD1L-201ENST00000361293 ZCCHC13Q8WW36 166 aaKnown RBP11.94□□□□□ -0.5
CHD1L-201ENST00000361293 SERP1Q9Y6X1 66 aa11.93□□□□□ -0.5
CHD1L-201ENST00000361293 KRTAP10-1P60331 282 aa11.93□□□□□ -0.5
CHD1L-201ENST00000361293 KRTAP21-3Q3LHN1 58 aa11.93□□□□□ -0.5
CHD1L-201ENST00000361293 C5orf47Q569G3 176 aa11.93□□□□□ -0.5
CHD1L-201ENST00000361293 MMP24-AS1A0A0U1RRL7 71 aa11.92□□□□□ -0.5
CHD1L-201ENST00000361293 Q6ZSA8 131 aa11.88□□□□□ -0.51
CHD1L-201ENST00000361293 ATP5EP56381 51 aaPredicted RBP11.87□□□□□ -0.51
CHD1L-201ENST00000361293 NDUFB1O75438 58 aa11.87□□□□□ -0.51
CHD1L-201ENST00000361293 LRP1BQ9NZR2 4599 aa11.85□□□□□ -0.51
CHD1L-201ENST00000361293 hDV103S1A0JD37 113 aa11.83□□□□□ -0.52
CHD1L-201ENST00000361293 Q5XG85 94 aa11.83□□□□□ -0.52
CHD1L-201ENST00000361293 LINC00208Q96KT6 92 aa11.81□□□□□ -0.52
CHD1L-201ENST00000361293 IGHV6-1A0A0B4J1U7 121 aa11.8□□□□□ -0.52
CHD1L-201ENST00000361293 MP68P56378 58 aa11.8□□□□□ -0.52
CHD1L-201ENST00000361293 H0Y9P7 68 aa11.8□□□□□ -0.52
CHD1L-201ENST00000361293 ASB16-AS1Q495Z4 193 aa11.79□□□□□ -0.52
CHD1L-201ENST00000361293 C8orf17Q9NRJ1 99 aa11.79□□□□□ -0.52
CHD1L-201ENST00000361293 A0A1B0GVX0 72 aa11.78□□□□□ -0.52
CHD1L-201ENST00000361293 A0A087X002 238 aa11.78□□□□□ -0.52
CHD1L-201ENST00000361293 NOTCH2NLQ7Z3S9 236 aa11.77□□□□□ -0.53
CHD1L-201ENST00000361293 C4orf26Q17RF5 130 aa11.76□□□□□ -0.53
CHD1L-201ENST00000361293 TRAV22A0A0B4J277 110 aa11.75□□□□□ -0.53
CHD1L-201ENST00000361293 FAM229BQ4G0N7 80 aa11.75□□□□□ -0.53
CHD1L-201ENST00000361293 SPINK6Q6UWN8 80 aa11.75□□□□□ -0.53
CHD1L-201ENST00000361293 PRR4Q16378 134 aa11.74□□□□□ -0.53
CHD1L-201ENST00000361293 FP248Q71RG6 208 aaPredicted RBP11.74□□□□□ -0.53
CHD1L-201ENST00000361293 KRTAP13-2Q52LG2 175 aa11.73□□□□□ -0.53
CHD1L-201ENST00000361293 CDK2AP2O75956 126 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms