RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 CFAP54Q96N23 3096 aa11.04□□□□□ -0.64
CACNA1A-201ENST00000360228 ROMO1P60602 79 aa11.04□□□□□ -0.64
CACNA1A-201ENST00000360228 MAP1AP78559 2803 aaPredicted RBP11.03□□□□□ -0.64
CACNA1A-201ENST00000360228 TNP2Q05952 138 aa11□□□□□ -0.65
CACNA1A-201ENST00000360228 FAM229BQ4G0N7 80 aa11□□□□□ -0.65
CACNA1A-201ENST00000360228 Q5XG85 94 aa11□□□□□ -0.65
CACNA1A-201ENST00000360228 H1FX-AS1Q4G0G2 97 aa11□□□□□ -0.65
CACNA1A-201ENST00000360228 LINC00612Q8N6U2 182 aa10.99□□□□□ -0.65
CACNA1A-201ENST00000360228 Q5VV11 94 aa10.98□□□□□ -0.65
CACNA1A-201ENST00000360228 APCP25054 2843 aa10.98□□□□□ -0.65
CACNA1A-201ENST00000360228 R4GN34 69 aa10.97□□□□□ -0.65
CACNA1A-201ENST00000360228 CNBPP62633 177 aaKnown RBP10.96□□□□□ -0.65
CACNA1A-201ENST00000360228 UTP20O75691 2785 aaKnown RBP10.95□□□□□ -0.66
CACNA1A-201ENST00000360228 GIG44P09565 113 aaPredicted RBP10.94□□□□□ -0.66
CACNA1A-201ENST00000360228 C10orf142B7Z368 130 aa10.93□□□□□ -0.66
CACNA1A-201ENST00000360228 CASC10Q5T4H9 136 aa10.93□□□□□ -0.66
CACNA1A-201ENST00000360228 C19orf73Q9NVV2 129 aa10.92□□□□□ -0.66
CACNA1A-201ENST00000360228 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.9□□□□□ -0.66
CACNA1A-201ENST00000360228 FP248Q71RG6 208 aaPredicted RBP10.9□□□□□ -0.66
CACNA1A-201ENST00000360228 RPL37P61927 97 aaKnown RBP10.88□□□□□ -0.67
CACNA1A-201ENST00000360228 NSD1Q96L73 2696 aaPredicted RBP10.87□□□□□ -0.67
CACNA1A-201ENST00000360228 TEP1Q99973 2627 aaKnown RBP10.85□□□□□ -0.67
CACNA1A-201ENST00000360228 LAMA2P24043 3122 aaKnown RBP10.85□□□□□ -0.67
CACNA1A-201ENST00000360228 PLAC4Q8WY50 150 aa10.85□□□□□ -0.67
CACNA1A-201ENST00000360228 ZCCHC13Q8WW36 166 aaKnown RBP10.83□□□□□ -0.68
CACNA1A-201ENST00000360228 ITPR1Q14643 2758 aa10.83□□□□□ -0.68
CACNA1A-201ENST00000360228 ITPR2Q14571 2701 aa10.82□□□□□ -0.68
CACNA1A-201ENST00000360228 SETXQ7Z333 2677 aaKnown RBP10.77□□□□□ -0.69
CACNA1A-201ENST00000360228 ZNF292O60281 2723 aa10.75□□□□□ -0.69
CACNA1A-201ENST00000360228 A0A0C4DFX4 3053 aa10.75□□□□□ -0.69
CACNA1A-201ENST00000360228 XIRP2A4UGR9 3374 aa10.75□□□□□ -0.69
CACNA1A-201ENST00000360228 SEC61BP60468 96 aaKnown RBP10.73□□□□□ -0.69
CACNA1A-201ENST00000360228 KRTAP10-3P60369 221 aa10.73□□□□□ -0.69
CACNA1A-201ENST00000360228 M0QZ58 72 aa10.71□□□□□ -0.69
CACNA1A-201ENST00000360228 Q5W150 140 aa10.7□□□□□ -0.7
CACNA1A-201ENST00000360228 MMP24-AS1A0A0U1RRL7 71 aa10.66□□□□□ -0.7
CACNA1A-201ENST00000360228 IGSF10Q6WRI0 2623 aa10.64□□□□□ -0.71
CACNA1A-201ENST00000360228 REV3LO60673 3130 aa10.63□□□□□ -0.71
CACNA1A-201ENST00000360228 A0A087X002 238 aa10.63□□□□□ -0.71
CACNA1A-201ENST00000360228 FREM2Q5SZK8 3169 aa10.59□□□□□ -0.71
CACNA1A-201ENST00000360228 C20orf166-AS1Q96NR2 134 aa10.58□□□□□ -0.72
CACNA1A-201ENST00000360228 ADM2Q7Z4H4 148 aa10.57□□□□□ -0.72
CACNA1A-201ENST00000360228 CYSTM1Q9H1C7 97 aa10.57□□□□□ -0.72
CACNA1A-201ENST00000360228 UBR5O95071 2799 aaPredicted RBP10.56□□□□□ -0.72
CACNA1A-201ENST00000360228 NDUFAF8A1L188 74 aa10.55□□□□□ -0.72
CACNA1A-201ENST00000360228 SPATA8Q6RVD6 105 aa10.53□□□□□ -0.72
CACNA1A-201ENST00000360228 KRTAP25-1Q3LHN0 102 aa10.51□□□□□ -0.73
CACNA1A-201ENST00000360228 A0A096LNT2 108 aa10.51□□□□□ -0.73
CACNA1A-201ENST00000360228 DSPP15924 2871 aaKnown RBP10.5□□□□□ -0.73
CACNA1A-201ENST00000360228 NBEAL2Q6ZNJ1 2754 aa10.49□□□□□ -0.73
CACNA1A-201ENST00000360228 Q8NDZ9 215 aa10.47□□□□□ -0.73
CACNA1A-201ENST00000360228 PLAC8Q9NZF1 115 aa10.46□□□□□ -0.73
CACNA1A-201ENST00000360228 LINC00472Q9H8W2 130 aa10.45□□□□□ -0.74
CACNA1A-201ENST00000360228 LRBAP50851 2863 aa10.44□□□□□ -0.74
CACNA1A-201ENST00000360228 CELSR3Q9NYQ7 3312 aa10.43□□□□□ -0.74
CACNA1A-201ENST00000360228 Q5VSD8 79 aa10.43□□□□□ -0.74
CACNA1A-201ENST00000360228 RANBP2P49792 3224 aaKnown RBP10.42□□□□□ -0.74
CACNA1A-201ENST00000360228 FRYLO94915 3013 aa10.41□□□□□ -0.74
CACNA1A-201ENST00000360228 Q6ZR54 194 aa10.39□□□□□ -0.75
CACNA1A-201ENST00000360228 TRIOO75962 3097 aa10.37□□□□□ -0.75
CACNA1A-201ENST00000360228 OXTP01178 125 aa10.37□□□□□ -0.75
CACNA1A-201ENST00000360228 VPS13AQ96RL7 3174 aa10.37□□□□□ -0.75
CACNA1A-201ENST00000360228 SPRR1AP35321 89 aa10.35□□□□□ -0.75
CACNA1A-201ENST00000360228 MKI67P46013 3256 aaKnown RBP10.35□□□□□ -0.75
CACNA1A-201ENST00000360228 SPRR1BP22528 89 aa10.32□□□□□ -0.76
CACNA1A-201ENST00000360228 TRANK1O15050 2925 aa10.31□□□□□ -0.76
CACNA1A-201ENST00000360228 A6NN06 94 aa10.31□□□□□ -0.76
CACNA1A-201ENST00000360228 KRTAP26-1Q6PEX3 210 aa10.3□□□□□ -0.76
CACNA1A-201ENST00000360228 PANO1I0J062 215 aa10.29□□□□□ -0.76
CACNA1A-201ENST00000360228 CHD9Q3L8U1 2897 aa10.25□□□□□ -0.77
CACNA1A-201ENST00000360228 MGAQ8IWI9 3026 aa10.24□□□□□ -0.77
CACNA1A-201ENST00000360228 FRYQ5TBA9 3013 aa10.22□□□□□ -0.77
CACNA1A-201ENST00000360228 WDFY4Q6ZS81 3184 aa10.2□□□□□ -0.78
CACNA1A-201ENST00000360228 DNAH14Q0VDD8 3507 aa10.19□□□□□ -0.78
CACNA1A-201ENST00000360228 KRTAP1-3Q8IUG1 177 aa10.18□□□□□ -0.78
CACNA1A-201ENST00000360228 C10orf95Q9H7T3 257 aa10.17□□□□□ -0.78
CACNA1A-201ENST00000360228 A8MUU9 505 aa10.16□□□□□ -0.78
CACNA1A-201ENST00000360228 UNC80Q8N2C7 3258 aa10.16□□□□□ -0.78
CACNA1A-201ENST00000360228 KALRNO60229 2985 aa10.14□□□□□ -0.79
CACNA1A-201ENST00000360228 A8MU10 97 aa10.11□□□□□ -0.79
CACNA1A-201ENST00000360228 KRTAP1-1Q07627 177 aa10.1□□□□□ -0.79
CACNA1A-201ENST00000360228 CRYBG3Q68DQ2 2970 aa10.08□□□□□ -0.8
CACNA1A-201ENST00000360228 KRTAP10-1P60331 282 aa10.07□□□□□ -0.8
CACNA1A-201ENST00000360228 LCE6AA0A183 80 aa10.07□□□□□ -0.8
CACNA1A-201ENST00000360228 BRCA2P51587 3418 aa10.06□□□□□ -0.8
CACNA1A-201ENST00000360228 TNP1P09430 55 aa10.04□□□□□ -0.8
CACNA1A-201ENST00000360228 PRUNE2Q8WUY3 3088 aa10.04□□□□□ -0.8
CACNA1A-201ENST00000360228 KRTAP10-2P60368 255 aa10.04□□□□□ -0.8
CACNA1A-201ENST00000360228 ASH1LQ9NR48 2969 aaKnown RBP10.04□□□□□ -0.8
CACNA1A-201ENST00000360228 KRTAP1-5Q9BYS1 174 aa10.02□□□□□ -0.81
CACNA1A-201ENST00000360228 TENM3Q9P273 2699 aa10□□□□□ -0.81
CACNA1A-201ENST00000360228 KRTAP29-1A8MX34 341 aaPredicted RBP9.99□□□□□ -0.81
CACNA1A-201ENST00000360228 NF1P21359 2839 aa9.97□□□□□ -0.81
CACNA1A-201ENST00000360228 CHD7Q9P2D1 2997 aa9.96□□□□□ -0.81
CACNA1A-201ENST00000360228 PP632Q6XCG6 107 aa9.96□□□□□ -0.81
CACNA1A-201ENST00000360228 COL12A1Q99715 3063 aa9.96□□□□□ -0.81
CACNA1A-201ENST00000360228 LAMA3Q16787 3333 aa9.95□□□□□ -0.82
CACNA1A-201ENST00000360228 TACC2O95359 2948 aa9.92□□□□□ -0.82
CACNA1A-201ENST00000360228 HTTP42858 3142 aa9.91□□□□□ -0.82
CACNA1A-201ENST00000360228 DMXL2Q8TDJ6 3036 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms