RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 DNAL4O96015 105 aa11.11□□□□□ -0.63
HLA-DRB1-201ENST00000360004 FAM218AQ96MZ4 157 aa11.11□□□□□ -0.63
HLA-DRB1-201ENST00000360004 SNHG12Q9BXW3 62 aa11.11□□□□□ -0.63
HLA-DRB1-201ENST00000360004 A0A1B0GX51 115 aa11.1□□□□□ -0.63
HLA-DRB1-201ENST00000360004 GHRHP01286 108 aa11.1□□□□□ -0.63
HLA-DRB1-201ENST00000360004 PRR4Q16378 134 aa11.1□□□□□ -0.63
HLA-DRB1-201ENST00000360004 OCIAD2Q56VL3 154 aa11.1□□□□□ -0.63
HLA-DRB1-201ENST00000360004 CLEC2BQ92478 149 aa11.1□□□□□ -0.63
HLA-DRB1-201ENST00000360004 SPINK1P00995 79 aa11.09□□□□□ -0.63
HLA-DRB1-201ENST00000360004 SMIM29Q86T20 159 aa11.08□□□□□ -0.64
HLA-DRB1-201ENST00000360004 PPDPFLQ8WWR9 84 aa11.08□□□□□ -0.64
HLA-DRB1-201ENST00000360004 HRCT1Q6UXD1 115 aa11.06□□□□□ -0.64
HLA-DRB1-201ENST00000360004 FABP2P12104 132 aa11.04□□□□□ -0.64
HLA-DRB1-201ENST00000360004 RETNLBQ9BQ08 111 aa11.04□□□□□ -0.64
HLA-DRB1-201ENST00000360004 NAA38Q9BRA0 125 aaKnown RBP11.01□□□□□ -0.65
HLA-DRB1-201ENST00000360004 ORMDL1Q9P0S3 153 aa11.01□□□□□ -0.65
HLA-DRB1-201ENST00000360004 LIMD2Q9BT23 127 aa11□□□□□ -0.65
HLA-DRB1-201ENST00000360004 RPS29P62273 56 aaKnown RBP10.99□□□□□ -0.65
HLA-DRB1-201ENST00000360004 Q6JHZ5 121 aa10.99□□□□□ -0.65
HLA-DRB1-201ENST00000360004 H3BQ85 93 aa10.98□□□□□ -0.65
HLA-DRB1-201ENST00000360004 LYRM7Q5U5X0 104 aa10.98□□□□□ -0.65
HLA-DRB1-201ENST00000360004 NDUFV3P56181 108 aaKnown RBP10.97□□□□□ -0.65
HLA-DRB1-201ENST00000360004 HMCN2Q8NDA2 5059 aa10.97□□□□□ -0.65
HLA-DRB1-201ENST00000360004 TRACP01848 142 aa10.96□□□□□ -0.65
HLA-DRB1-201ENST00000360004 CD164Q04900 197 aa10.96□□□□□ -0.65
HLA-DRB1-201ENST00000360004 A0A0G2JQZ4 141 aa10.95□□□□□ -0.66
HLA-DRB1-201ENST00000360004 H3BUT2 72 aa10.95□□□□□ -0.66
HLA-DRB1-201ENST00000360004 LST1O00453 97 aa10.95□□□□□ -0.66
HLA-DRB1-201ENST00000360004 TMEM256-PLSCR3K7ERE1 68 aa10.93□□□□□ -0.66
HLA-DRB1-201ENST00000360004 ATXN8Q156A1 80 aa10.93□□□□□ -0.66
HLA-DRB1-201ENST00000360004 IGLV8-61A0A075B6I0 122 aa10.92□□□□□ -0.66
HLA-DRB1-201ENST00000360004 IGLV7-46A0A075B6I9 117 aa10.92□□□□□ -0.66
HLA-DRB1-201ENST00000360004 H3BMG7 143 aa10.92□□□□□ -0.66
HLA-DRB1-201ENST00000360004 IGFL1Q6UW32 110 aa10.91□□□□□ -0.66
HLA-DRB1-201ENST00000360004 PCP4L1A6NKN8 68 aa10.9□□□□□ -0.66
HLA-DRB1-201ENST00000360004 FP248Q71RG6 208 aaPredicted RBP10.9□□□□□ -0.66
HLA-DRB1-201ENST00000360004 A0A1B0GV72 72 aa10.89□□□□□ -0.67
HLA-DRB1-201ENST00000360004 TCL1BO95988 128 aa10.88□□□□□ -0.67
HLA-DRB1-201ENST00000360004 C9orf118A6NHY6 69 aa10.87□□□□□ -0.67
HLA-DRB1-201ENST00000360004 TRBV20-1A0A075B6N2 111 aa10.85□□□□□ -0.67
HLA-DRB1-201ENST00000360004 TAX1BP3O14907 124 aa10.85□□□□□ -0.67
HLA-DRB1-201ENST00000360004 BAALC-AS2P0C853 105 aa10.85□□□□□ -0.67
HLA-DRB1-201ENST00000360004 UBE2V1Q13404 147 aa10.84□□□□□ -0.67
HLA-DRB1-201ENST00000360004 COL5A1-AS1Q5SY13 56 aa10.83□□□□□ -0.68
HLA-DRB1-201ENST00000360004 ANKRD29Q8N6D5 301 aa10.83□□□□□ -0.68
HLA-DRB1-201ENST00000360004 TRBV7-7A0A0K0K1E9 115 aa10.82□□□□□ -0.68
HLA-DRB1-201ENST00000360004 A0A1W2PPM0 123 aa10.81□□□□□ -0.68
HLA-DRB1-201ENST00000360004 CDIP1Q9H305 208 aa10.8□□□□□ -0.68
HLA-DRB1-201ENST00000360004 Q5XG85 94 aa10.79□□□□□ -0.68
HLA-DRB1-201ENST00000360004 TEN1Q86WV5 123 aa10.79□□□□□ -0.68
HLA-DRB1-201ENST00000360004 C9JAW5 83 aa10.78□□□□□ -0.68
HLA-DRB1-201ENST00000360004 TPRXLQ17RH7 258 aa10.78□□□□□ -0.68
HLA-DRB1-201ENST00000360004 RBM3P98179 157 aaKnown RBP10.77□□□□□ -0.69
HLA-DRB1-201ENST00000360004 SS18L2Q9UHA2 77 aa10.77□□□□□ -0.69
HLA-DRB1-201ENST00000360004 DSCR8Q96T75 97 aa10.76□□□□□ -0.69
HLA-DRB1-201ENST00000360004 Q6Q795 121 aa10.75□□□□□ -0.69
HLA-DRB1-201ENST00000360004 VPS25Q9BRG1 176 aa10.74□□□□□ -0.69
HLA-DRB1-201ENST00000360004 SPCS1Q9Y6A9 102 aa10.74□□□□□ -0.69
HLA-DRB1-201ENST00000360004 C1orf195Q5TG92 126 aa10.73□□□□□ -0.69
HLA-DRB1-201ENST00000360004 A0A087WSZ3 146 aa10.72□□□□□ -0.69
HLA-DRB1-201ENST00000360004 CCKP06307 115 aa10.72□□□□□ -0.69
HLA-DRB1-201ENST00000360004 LRP2P98164 4655 aa10.71□□□□□ -0.69
HLA-DRB1-201ENST00000360004 JMJD7-PLA2G4BH0Y9G9 81 aa10.71□□□□□ -0.69
HLA-DRB1-201ENST00000360004 A0A1W2PNM2 257 aa10.7□□□□□ -0.7
HLA-DRB1-201ENST00000360004 KRTAP13-3Q3SY46 172 aa10.69□□□□□ -0.7
HLA-DRB1-201ENST00000360004 ASB16-AS1Q495Z4 193 aa10.69□□□□□ -0.7
HLA-DRB1-201ENST00000360004 TRBV7-4A0A0J9YYF1 115 aa10.68□□□□□ -0.7
HLA-DRB1-201ENST00000360004 MTURNQ8N3F0 131 aa10.67□□□□□ -0.7
HLA-DRB1-201ENST00000360004 H3BT86 120 aa10.66□□□□□ -0.7
HLA-DRB1-201ENST00000360004 LPAP08519 4548 aa10.65□□□□□ -0.7
HLA-DRB1-201ENST00000360004 C9orf92A6NGG3 77 aa10.64□□□□□ -0.71
HLA-DRB1-201ENST00000360004 PDE6GP18545 87 aa10.61□□□□□ -0.71
HLA-DRB1-201ENST00000360004 C14orf132Q9NPU4 83 aa10.61□□□□□ -0.71
HLA-DRB1-201ENST00000360004 K7EP34 96 aa10.6□□□□□ -0.71
HLA-DRB1-201ENST00000360004 C21orf62-AS1Q17RA5 79 aa10.6□□□□□ -0.71
HLA-DRB1-201ENST00000360004 UBR4Q5T4S7 5183 aa10.6□□□□□ -0.71
HLA-DRB1-201ENST00000360004 GTF2H5Q6ZYL4 71 aa10.58□□□□□ -0.72
HLA-DRB1-201ENST00000360004 SIGMAR1Q99720 223 aa10.58□□□□□ -0.72
HLA-DRB1-201ENST00000360004 LOC110117498A0A087WWA1 95 aa10.57□□□□□ -0.72
HLA-DRB1-201ENST00000360004 Q6ZQT0 140 aa10.56□□□□□ -0.72
HLA-DRB1-201ENST00000360004 XP32Q5T750 250 aa10.54□□□□□ -0.72
HLA-DRB1-201ENST00000360004 IGKV4-1P06312 121 aa10.53□□□□□ -0.72
HLA-DRB1-201ENST00000360004 OBSCN-AS1Q96MR7 158 aa10.53□□□□□ -0.72
HLA-DRB1-201ENST00000360004 SEC61BP60468 96 aaKnown RBP10.51□□□□□ -0.73
HLA-DRB1-201ENST00000360004 A0A1B0GW54 56 aa10.49□□□□□ -0.73
HLA-DRB1-201ENST00000360004 DEFB116Q30KQ4 102 aa10.49□□□□□ -0.73
HLA-DRB1-201ENST00000360004 Q96NJ1 140 aa10.49□□□□□ -0.73
HLA-DRB1-201ENST00000360004 SMCPP49901 116 aaPredicted RBP10.45□□□□□ -0.74
HLA-DRB1-201ENST00000360004 LINC00472Q9H8W2 130 aa10.45□□□□□ -0.74
HLA-DRB1-201ENST00000360004 PRO0461Q9UI25 63 aa10.44□□□□□ -0.74
HLA-DRB1-201ENST00000360004 J3KT08 172 aa10.43□□□□□ -0.74
HLA-DRB1-201ENST00000360004 NREPQ16612 68 aa10.42□□□□□ -0.74
HLA-DRB1-201ENST00000360004 F8W1H4 67 aa10.41□□□□□ -0.74
HLA-DRB1-201ENST00000360004 DSCR10P59022 87 aa10.4□□□□□ -0.74
HLA-DRB1-201ENST00000360004 IGHV6-1A0A0B4J1U7 121 aa10.39□□□□□ -0.75
HLA-DRB1-201ENST00000360004 RNF213Q63HN8 5207 aa10.38□□□□□ -0.75
HLA-DRB1-201ENST00000360004 NDUFB1O75438 58 aa10.38□□□□□ -0.75
HLA-DRB1-201ENST00000360004 LINC00313P59037 77 aa10.37□□□□□ -0.75
HLA-DRB1-201ENST00000360004 RPL37P61927 97 aaKnown RBP10.36□□□□□ -0.75
HLA-DRB1-201ENST00000360004 PCOTHQ58A44 107 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms