RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 ANAPC11Q9NYG5 84 aa8.84□□□□□ -0.99
VCP-201ENST00000358901 NSD1Q96L73 2696 aaPredicted RBP8.83□□□□□ -1
VCP-201ENST00000358901 Q96NJ1 140 aa8.82□□□□□ -1
VCP-201ENST00000358901 ITPR1Q14643 2758 aa8.82□□□□□ -1
VCP-201ENST00000358901 C8orf87E5RJ46 101 aa8.82□□□□□ -1
VCP-201ENST00000358901 ZNF861PO60384 105 aa8.82□□□□□ -1
VCP-201ENST00000358901 A0A1B0GVX0 72 aa8.81□□□□□ -1
VCP-201ENST00000358901 CYP4F30PQ9H0H9 118 aa8.8□□□□□ -1
VCP-201ENST00000358901 COL12A1Q99715 3063 aa8.8□□□□□ -1
VCP-201ENST00000358901 PLA2G1BP04054 148 aaKnown RBP8.8□□□□□ -1
VCP-201ENST00000358901 ASH1LQ9NR48 2969 aaKnown RBP8.79□□□□□ -1
VCP-201ENST00000358901 DSCR10P59022 87 aa8.79□□□□□ -1
VCP-201ENST00000358901 ZZEF1O43149 2961 aa8.78□□□□□ -1
VCP-201ENST00000358901 A0A087WTM6 91 aa8.78□□□□□ -1
VCP-201ENST00000358901 Q8NDZ9 215 aa8.77□□□□□ -1
VCP-201ENST00000358901 OCR1Q9BZK8 76 aa8.77□□□□□ -1.01
VCP-201ENST00000358901 SSBP3-AS1Q7Z2R9 100 aa8.76□□□□□ -1.01
VCP-201ENST00000358901 CNBPP62633 177 aaKnown RBP8.75□□□□□ -1.01
VCP-201ENST00000358901 LOC400499M0QZD8 3231 aa8.75□□□□□ -1.01
VCP-201ENST00000358901 PSORS1C2Q9UIG4 136 aa8.75□□□□□ -1.01
VCP-201ENST00000358901 STAB2Q8WWQ8 2551 aa8.74□□□□□ -1.01
VCP-201ENST00000358901 IGLV5-37A0A075B6J1 123 aa8.73□□□□□ -1.01
VCP-201ENST00000358901 SPRR4Q96PI1 79 aa8.73□□□□□ -1.01
VCP-201ENST00000358901 WWC2-AS2Q96NR7 200 aa8.71□□□□□ -1.01
VCP-201ENST00000358901 UQCR11O14957 56 aa8.71□□□□□ -1.02
VCP-201ENST00000358901 DMDP11532 3685 aa8.7□□□□□ -1.02
VCP-201ENST00000358901 CYSTM1Q9H1C7 97 aa8.7□□□□□ -1.02
VCP-201ENST00000358901 APLNQ9ULZ1 77 aa8.7□□□□□ -1.02
VCP-201ENST00000358901 BAHCC1Q9P281 2608 aa8.68□□□□□ -1.02
VCP-201ENST00000358901 IGLV7-43P04211 117 aa8.67□□□□□ -1.02
VCP-201ENST00000358901 SPANXA2-OT1Q8N9U9 137 aa8.67□□□□□ -1.02
VCP-201ENST00000358901 LRBAP50851 2863 aa8.66□□□□□ -1.02
VCP-201ENST00000358901 FLG2Q5D862 2391 aaPredicted RBP8.66□□□□□ -1.02
VCP-201ENST00000358901 WDFY3Q8IZQ1 3526 aa8.63□□□□□ -1.03
VCP-201ENST00000358901 MIR22HGQ0VDD5 57 aa8.62□□□□□ -1.03
VCP-201ENST00000358901 PRR26Q8N8Z3 221 aa8.62□□□□□ -1.03
VCP-201ENST00000358901 LINC00304Q8N9R0 145 aa8.61□□□□□ -1.03
VCP-201ENST00000358901 UTP20O75691 2785 aaKnown RBP8.6□□□□□ -1.03
VCP-201ENST00000358901 ASPMQ8IZT6 3477 aa8.6□□□□□ -1.03
VCP-201ENST00000358901 WIPF1O43516 503 aa8.6□□□□□ -1.03
VCP-201ENST00000358901 SMR3BP02814 79 aaPredicted RBP8.6□□□□□ -1.03
VCP-201ENST00000358901 C9orf92A6NGG3 77 aa8.59□□□□□ -1.03
VCP-201ENST00000358901 DCHS1Q96JQ0 3298 aa8.59□□□□□ -1.04
VCP-201ENST00000358901 SPRR1AP35321 89 aa8.57□□□□□ -1.04
VCP-201ENST00000358901 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.57□□□□□ -1.04
VCP-201ENST00000358901 ITPR2Q14571 2701 aa8.57□□□□□ -1.04
VCP-201ENST00000358901 CELSR2Q9HCU4 2923 aa8.56□□□□□ -1.04
VCP-201ENST00000358901 Q1T7F1 81 aa8.55□□□□□ -1.04
VCP-201ENST00000358901 Q5XG85 94 aa8.54□□□□□ -1.04
VCP-201ENST00000358901 ZANQ9Y493 2812 aa8.53□□□□□ -1.04
VCP-201ENST00000358901 FP248Q71RG6 208 aaPredicted RBP8.53□□□□□ -1.04
VCP-201ENST00000358901 KTN1-AS1Q86SY8 53 aa8.53□□□□□ -1.04
VCP-201ENST00000358901 Q8N1X5 172 aa8.53□□□□□ -1.04
VCP-201ENST00000358901 CD164Q04900 197 aa8.52□□□□□ -1.05
VCP-201ENST00000358901 FAM229BQ4G0N7 80 aa8.52□□□□□ -1.05
VCP-201ENST00000358901 TNP2Q05952 138 aa8.51□□□□□ -1.05
VCP-201ENST00000358901 HIVEP1P15822 2718 aa8.51□□□□□ -1.05
VCP-201ENST00000358901 IGLV7-46A0A075B6I9 117 aa8.5□□□□□ -1.05
VCP-201ENST00000358901 CDC42SE1Q9NRR8 79 aa8.5□□□□□ -1.05
VCP-201ENST00000358901 DMBT1Q9UGM3 2413 aaPredicted RBP8.49□□□□□ -1.05
VCP-201ENST00000358901 MMP24-AS1A0A0U1RRL7 71 aa8.49□□□□□ -1.05
VCP-201ENST00000358901 KRTAP26-1Q6PEX3 210 aa8.49□□□□□ -1.05
VCP-201ENST00000358901 LAMA5O15230 3695 aa8.49□□□□□ -1.05
VCP-201ENST00000358901 NIPBLQ6KC79 2804 aaeCLIP8.48□□□□□ -1.05
VCP-201ENST00000358901 SPINT4Q6UDR6 99 aa8.46□□□□□ -1.05
VCP-201ENST00000358901 APCP25054 2843 aa8.46□□□□□ -1.06
VCP-201ENST00000358901 OXTP01178 125 aa8.45□□□□□ -1.06
VCP-201ENST00000358901 Q8N9P0 234 aaPredicted RBP8.45□□□□□ -1.06
VCP-201ENST00000358901 KRTAP1-5Q9BYS1 174 aa8.44□□□□□ -1.06
VCP-201ENST00000358901 LCA10Q71F78 164 aa8.44□□□□□ -1.06
VCP-201ENST00000358901 LINC00472Q9H8W2 130 aa8.44□□□□□ -1.06
VCP-201ENST00000358901 HRES1P13985 223 aa8.43□□□□□ -1.06
VCP-201ENST00000358901 SPRR1BP22528 89 aa8.41□□□□□ -1.06
VCP-201ENST00000358901 DCHS2Q6V1P9 2916 aa8.4□□□□□ -1.06
VCP-201ENST00000358901 KMT2BQ9UMN6 2715 aaPredicted RBP8.4□□□□□ -1.06
VCP-201ENST00000358901 Q75L30 129 aa8.37□□□□□ -1.07
VCP-201ENST00000358901 NF1P21359 2839 aa8.37□□□□□ -1.07
VCP-201ENST00000358901 PLAC8Q9NZF1 115 aa8.36□□□□□ -1.07
VCP-201ENST00000358901 A0A0D9SG42 100 aa8.35□□□□□ -1.07
VCP-201ENST00000358901 CRIPTQ9P021 101 aa8.35□□□□□ -1.07
VCP-201ENST00000358901 LINC01558Q9Y6Z2 57 aa8.34□□□□□ -1.07
VCP-201ENST00000358901 RELNP78509 3460 aa8.33□□□□□ -1.08
VCP-201ENST00000358901 KRTAP4-16G5E9R7 235 aaPredicted RBP8.32□□□□□ -1.08
VCP-201ENST00000358901 Q5VV11 94 aa8.32□□□□□ -1.08
VCP-201ENST00000358901 FBN2P35556 2912 aa8.31□□□□□ -1.08
VCP-201ENST00000358901 CRYBG3Q68DQ2 2970 aa8.29□□□□□ -1.08
VCP-201ENST00000358901 J3QL48 77 aa8.29□□□□□ -1.08
VCP-201ENST00000358901 COX6B2Q6YFQ2 88 aa8.27□□□□□ -1.08
VCP-201ENST00000358901 Q5W150 140 aa8.27□□□□□ -1.09
VCP-201ENST00000358901 ZFHX4Q86UP3 3567 aa8.27□□□□□ -1.09
VCP-201ENST00000358901 TENM4Q6N022 2769 aa8.27□□□□□ -1.09
VCP-201ENST00000358901 LINC01554Q52M75 96 aa8.26□□□□□ -1.09
VCP-201ENST00000358901 A0A1B0GU33 70 aa8.26□□□□□ -1.09
VCP-201ENST00000358901 SPINK7P58062 85 aa8.25□□□□□ -1.09
VCP-201ENST00000358901 RBM12B-AS1Q9P1G2 102 aa8.25□□□□□ -1.09
VCP-201ENST00000358901 PANO1I0J062 215 aa8.24□□□□□ -1.09
VCP-201ENST00000358901 ZCCHC13Q8WW36 166 aaKnown RBP8.22□□□□□ -1.09
VCP-201ENST00000358901 HRNRQ86YZ3 2850 aaPredicted RBP8.21□□□□□ -1.09
VCP-201ENST00000358901 PRAC1Q96KF2 57 aa8.21□□□□□ -1.1
VCP-201ENST00000358901 KRTAP29-1A8MX34 341 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms