RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 SETXQ7Z333 2677 aaKnown RBP11□□□□□ -0.65
COL27A1-201ENST00000356083 C19orf73Q9NVV2 129 aa11□□□□□ -0.65
COL27A1-201ENST00000356083 Q5VSD8 79 aa11□□□□□ -0.65
COL27A1-201ENST00000356083 SZT2Q5T011 3432 aa10.99□□□□□ -0.65
COL27A1-201ENST00000356083 PRR34Q9NV39 138 aa10.98□□□□□ -0.65
COL27A1-201ENST00000356083 CSAG1Q6PB30 78 aa10.97□□□□□ -0.65
COL27A1-201ENST00000356083 LAMA3Q16787 3333 aa10.97□□□□□ -0.65
COL27A1-201ENST00000356083 H1FX-AS1Q4G0G2 97 aa10.97□□□□□ -0.65
COL27A1-201ENST00000356083 H7BZZ5 65 aa10.96□□□□□ -0.66
COL27A1-201ENST00000356083 SPINK7P58062 85 aa10.95□□□□□ -0.66
COL27A1-201ENST00000356083 KLKP1Q107X0 134 aa10.95□□□□□ -0.66
COL27A1-201ENST00000356083 PLAC4Q8WY50 150 aa10.94□□□□□ -0.66
COL27A1-201ENST00000356083 A0A0A0MQY5 61 aa10.93□□□□□ -0.66
COL27A1-201ENST00000356083 CRYBG3Q68DQ2 2970 aa10.93□□□□□ -0.66
COL27A1-201ENST00000356083 C10orf142B7Z368 130 aa10.92□□□□□ -0.66
COL27A1-201ENST00000356083 FRYQ5TBA9 3013 aa10.91□□□□□ -0.66
COL27A1-201ENST00000356083 HTTP42858 3142 aa10.9□□□□□ -0.66
COL27A1-201ENST00000356083 TEP1Q99973 2627 aaKnown RBP10.89□□□□□ -0.67
COL27A1-201ENST00000356083 A0A1W2PNM2 257 aa10.88□□□□□ -0.67
COL27A1-201ENST00000356083 NOTCH1P46531 2555 aa10.87□□□□□ -0.67
COL27A1-201ENST00000356083 SPANXA2-OT1Q8N9U9 137 aa10.87□□□□□ -0.67
COL27A1-201ENST00000356083 MAP1AP78559 2803 aaPredicted RBP10.87□□□□□ -0.67
COL27A1-201ENST00000356083 GIG44P09565 113 aaPredicted RBP10.86□□□□□ -0.67
COL27A1-201ENST00000356083 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.85□□□□□ -0.67
COL27A1-201ENST00000356083 CNBPP62633 177 aaKnown RBP10.84□□□□□ -0.67
COL27A1-201ENST00000356083 WDFY4Q6ZS81 3184 aa10.83□□□□□ -0.68
COL27A1-201ENST00000356083 SEC61BP60468 96 aaKnown RBP10.82□□□□□ -0.68
COL27A1-201ENST00000356083 DMAC1Q96GE9 116 aa10.82□□□□□ -0.68
COL27A1-201ENST00000356083 SPEGQ15772 3267 aa10.79□□□□□ -0.68
COL27A1-201ENST00000356083 MGAQ8IWI9 3026 aa10.79□□□□□ -0.68
COL27A1-201ENST00000356083 TRANK1O15050 2925 aa10.78□□□□□ -0.68
COL27A1-201ENST00000356083 M0QZ58 72 aa10.75□□□□□ -0.69
COL27A1-201ENST00000356083 ZCCHC13Q8WW36 166 aaKnown RBP10.74□□□□□ -0.69
COL27A1-201ENST00000356083 PRAC1Q96KF2 57 aa10.74□□□□□ -0.69
COL27A1-201ENST00000356083 H3BS24 57 aa10.73□□□□□ -0.69
COL27A1-201ENST00000356083 DSPP15924 2871 aaKnown RBP10.72□□□□□ -0.69
COL27A1-201ENST00000356083 VCANP13611 3396 aa10.72□□□□□ -0.69
COL27A1-201ENST00000356083 Q8N9P0 234 aaPredicted RBP10.7□□□□□ -0.7
COL27A1-201ENST00000356083 CFAP47Q6ZTR5 3102 aa10.69□□□□□ -0.7
COL27A1-201ENST00000356083 ASH1LQ9NR48 2969 aaKnown RBP10.69□□□□□ -0.7
COL27A1-201ENST00000356083 NSD1Q96L73 2696 aaPredicted RBP10.66□□□□□ -0.7
COL27A1-201ENST00000356083 DMXL2Q8TDJ6 3036 aa10.63□□□□□ -0.71
COL27A1-201ENST00000356083 OCR1Q9BZK8 76 aa10.61□□□□□ -0.71
COL27A1-201ENST00000356083 FAM229BQ4G0N7 80 aa10.6□□□□□ -0.71
COL27A1-201ENST00000356083 ADM2Q7Z4H4 148 aa10.6□□□□□ -0.71
COL27A1-201ENST00000356083 GCN1Q92616 2671 aaKnown RBP10.59□□□□□ -0.71
COL27A1-201ENST00000356083 OXTP01178 125 aa10.59□□□□□ -0.71
COL27A1-201ENST00000356083 APCP25054 2843 aa10.59□□□□□ -0.71
COL27A1-201ENST00000356083 LAMA1P25391 3075 aa10.58□□□□□ -0.72
COL27A1-201ENST00000356083 Q75L30 129 aa10.55□□□□□ -0.72
COL27A1-201ENST00000356083 ITPR2Q14571 2701 aa10.55□□□□□ -0.72
COL27A1-201ENST00000356083 KALRNO60229 2985 aa10.55□□□□□ -0.72
COL27A1-201ENST00000356083 COL12A1Q99715 3063 aa10.55□□□□□ -0.72
COL27A1-201ENST00000356083 Q5W150 140 aa10.54□□□□□ -0.72
COL27A1-201ENST00000356083 COL6A3P12111 3177 aa10.53□□□□□ -0.72
COL27A1-201ENST00000356083 ROMO1P60602 79 aa10.53□□□□□ -0.72
COL27A1-201ENST00000356083 RPL37P61927 97 aaKnown RBP10.51□□□□□ -0.73
COL27A1-201ENST00000356083 KMT2BQ9UMN6 2715 aaPredicted RBP10.51□□□□□ -0.73
COL27A1-201ENST00000356083 NBEAL2Q6ZNJ1 2754 aa10.49□□□□□ -0.73
COL27A1-201ENST00000356083 C20orf166-AS1Q96NR2 134 aa10.49□□□□□ -0.73
COL27A1-201ENST00000356083 LINC01558Q9Y6Z2 57 aa10.49□□□□□ -0.73
COL27A1-201ENST00000356083 A0A096LNT2 108 aa10.48□□□□□ -0.73
COL27A1-201ENST00000356083 SPATA8Q6RVD6 105 aa10.48□□□□□ -0.73
COL27A1-201ENST00000356083 KRTAP1-3Q8IUG1 177 aa10.47□□□□□ -0.73
COL27A1-201ENST00000356083 PLAC8Q9NZF1 115 aa10.45□□□□□ -0.74
COL27A1-201ENST00000356083 FP248Q71RG6 208 aaPredicted RBP10.44□□□□□ -0.74
COL27A1-201ENST00000356083 FRYLO94915 3013 aa10.43□□□□□ -0.74
COL27A1-201ENST00000356083 MMP24-AS1A0A0U1RRL7 71 aa10.43□□□□□ -0.74
COL27A1-201ENST00000356083 UTP20O75691 2785 aaKnown RBP10.42□□□□□ -0.74
COL27A1-201ENST00000356083 CHD7Q9P2D1 2997 aa10.42□□□□□ -0.74
COL27A1-201ENST00000356083 ATMQ13315 3056 aa10.41□□□□□ -0.74
COL27A1-201ENST00000356083 Q8NDZ9 215 aa10.41□□□□□ -0.74
COL27A1-201ENST00000356083 BOD1L1Q8NFC6 3051 aa10.4□□□□□ -0.74
COL27A1-201ENST00000356083 ZNF292O60281 2723 aa10.4□□□□□ -0.74
COL27A1-201ENST00000356083 KLK9Q2XQG4 91 aa10.39□□□□□ -0.75
COL27A1-201ENST00000356083 ZZEF1O43149 2961 aa10.38□□□□□ -0.75
COL27A1-201ENST00000356083 USP34Q70CQ2 3546 aa10.38□□□□□ -0.75
COL27A1-201ENST00000356083 IGSF10Q6WRI0 2623 aa10.38□□□□□ -0.75
COL27A1-201ENST00000356083 KRTAP1-1Q07627 177 aa10.36□□□□□ -0.75
COL27A1-201ENST00000356083 MYO15AQ9UKN7 3530 aa10.35□□□□□ -0.75
COL27A1-201ENST00000356083 KRTAP10-1P60331 282 aa10.35□□□□□ -0.75
COL27A1-201ENST00000356083 KRTAP10-2P60368 255 aa10.34□□□□□ -0.75
COL27A1-201ENST00000356083 LCE6AA0A183 80 aa10.34□□□□□ -0.75
COL27A1-201ENST00000356083 SPTBN5Q9NRC6 3674 aaKnown RBP10.32□□□□□ -0.76
COL27A1-201ENST00000356083 Q5VV11 94 aa10.3□□□□□ -0.76
COL27A1-201ENST00000356083 LRBAP50851 2863 aa10.25□□□□□ -0.77
COL27A1-201ENST00000356083 UBR5O95071 2799 aaPredicted RBP10.23□□□□□ -0.77
COL27A1-201ENST00000356083 LINC00472Q9H8W2 130 aa10.21□□□□□ -0.77
COL27A1-201ENST00000356083 A8MUU9 505 aa10.2□□□□□ -0.78
COL27A1-201ENST00000356083 KRTAP16-1A8MUX0 517 aa10.19□□□□□ -0.78
COL27A1-201ENST00000356083 WDFY3Q8IZQ1 3526 aa10.18□□□□□ -0.78
COL27A1-201ENST00000356083 ADGRG4Q8IZF6 3080 aa10.16□□□□□ -0.78
COL27A1-201ENST00000356083 Q6ZR54 194 aa10.16□□□□□ -0.78
COL27A1-201ENST00000356083 KRTAP1-5Q9BYS1 174 aa10.16□□□□□ -0.78
COL27A1-201ENST00000356083 ASPMQ8IZT6 3477 aa10.16□□□□□ -0.78
COL27A1-201ENST00000356083 PANO1I0J062 215 aa10.14□□□□□ -0.79
COL27A1-201ENST00000356083 CYSTM1Q9H1C7 97 aa10.14□□□□□ -0.79
COL27A1-201ENST00000356083 TNRC18O15417 2968 aaPredicted RBP10.12□□□□□ -0.79
COL27A1-201ENST00000356083 EYSQ5T1H1 3165 aa10.12□□□□□ -0.79
COL27A1-201ENST00000356083 KRTAP26-1Q6PEX3 210 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms