RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 M0R2T5 61 aa6.95□□□□□ -1.3
SMARCE1-202ENST00000348513 CAMK2N1Q7Z7J9 78 aa6.94□□□□□ -1.3
SMARCE1-202ENST00000348513 ITPR3Q14573 2671 aa6.94□□□□□ -1.3
SMARCE1-202ENST00000348513 IGLV5-37A0A075B6J1 123 aa6.94□□□□□ -1.3
SMARCE1-202ENST00000348513 RANBP2P49792 3224 aaKnown RBP6.92□□□□□ -1.3
SMARCE1-202ENST00000348513 Q8N1X5 172 aa6.91□□□□□ -1.3
SMARCE1-202ENST00000348513 MKI67P46013 3256 aaKnown RBP6.9□□□□□ -1.3
SMARCE1-202ENST00000348513 ATRQ13535 2644 aa6.9□□□□□ -1.31
SMARCE1-202ENST00000348513 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.89□□□□□ -1.31
SMARCE1-202ENST00000348513 HTTP42858 3142 aa6.89□□□□□ -1.31
SMARCE1-202ENST00000348513 LAMA3Q16787 3333 aa6.89□□□□□ -1.31
SMARCE1-202ENST00000348513 HELZ2Q9BYK8 2649 aaKnown RBP6.89□□□□□ -1.31
SMARCE1-202ENST00000348513 MMP24-AS1A0A0U1RRL7 71 aa6.88□□□□□ -1.31
SMARCE1-202ENST00000348513 Q6ZR54 194 aa6.88□□□□□ -1.31
SMARCE1-202ENST00000348513 BRCA2P51587 3418 aa6.87□□□□□ -1.31
SMARCE1-202ENST00000348513 CHD9Q3L8U1 2897 aa6.86□□□□□ -1.31
SMARCE1-202ENST00000348513 CFAP46Q8IYW2 2715 aa6.86□□□□□ -1.31
SMARCE1-202ENST00000348513 MAST4O15021 2626 aa6.85□□□□□ -1.31
SMARCE1-202ENST00000348513 CFAP54Q96N23 3096 aa6.85□□□□□ -1.31
SMARCE1-202ENST00000348513 LCE6AA0A183 80 aa6.84□□□□□ -1.31
SMARCE1-202ENST00000348513 LINC00483Q53H64 154 aa6.84□□□□□ -1.31
SMARCE1-202ENST00000348513 CENPEQ02224 2701 aa6.82□□□□□ -1.32
SMARCE1-202ENST00000348513 CR1P17927 2039 aa6.81□□□□□ -1.32
SMARCE1-202ENST00000348513 MGAQ8IWI9 3026 aa6.79□□□□□ -1.32
SMARCE1-202ENST00000348513 Q6ZSA8 131 aa6.78□□□□□ -1.32
SMARCE1-202ENST00000348513 PRUNE2Q8WUY3 3088 aa6.76□□□□□ -1.33
SMARCE1-202ENST00000348513 H1FX-AS1Q4G0G2 97 aa6.75□□□□□ -1.33
SMARCE1-202ENST00000348513 LAMA2P24043 3122 aaKnown RBP6.75□□□□□ -1.33
SMARCE1-202ENST00000348513 Q8NDZ9 215 aa6.74□□□□□ -1.33
SMARCE1-202ENST00000348513 A8MUU9 505 aa6.73□□□□□ -1.33
SMARCE1-202ENST00000348513 RPL37P61927 97 aaKnown RBP6.73□□□□□ -1.33
SMARCE1-202ENST00000348513 C20orf166-AS1Q96NR2 134 aa6.73□□□□□ -1.33
SMARCE1-202ENST00000348513 WDFY4Q6ZS81 3184 aa6.71□□□□□ -1.34
SMARCE1-202ENST00000348513 XIRP2A4UGR9 3374 aa6.71□□□□□ -1.34
SMARCE1-202ENST00000348513 UNC80Q8N2C7 3258 aa6.7□□□□□ -1.34
SMARCE1-202ENST00000348513 Q5W150 140 aa6.7□□□□□ -1.34
SMARCE1-202ENST00000348513 KRTAP1-5Q9BYS1 174 aa6.7□□□□□ -1.34
SMARCE1-202ENST00000348513 PLAC8Q9NZF1 115 aa6.7□□□□□ -1.34
SMARCE1-202ENST00000348513 LINC00472Q9H8W2 130 aa6.69□□□□□ -1.34
SMARCE1-202ENST00000348513 KRTAP29-1A8MX34 341 aaPredicted RBP6.69□□□□□ -1.34
SMARCE1-202ENST00000348513 A0A0C4DFX4 3053 aa6.68□□□□□ -1.34
SMARCE1-202ENST00000348513 TEP1Q99973 2627 aaKnown RBP6.68□□□□□ -1.34
SMARCE1-202ENST00000348513 AKAP13Q12802 2813 aa6.67□□□□□ -1.34
SMARCE1-202ENST00000348513 TRANK1O15050 2925 aa6.67□□□□□ -1.34
SMARCE1-202ENST00000348513 CHD6Q8TD26 2715 aa6.67□□□□□ -1.34
SMARCE1-202ENST00000348513 TEX15Q9BXT5 2789 aa6.67□□□□□ -1.34
SMARCE1-202ENST00000348513 TRIOO75962 3097 aa6.66□□□□□ -1.34
SMARCE1-202ENST00000348513 NOTCH2NLQ7Z3S9 236 aa6.65□□□□□ -1.35
SMARCE1-202ENST00000348513 CDH23Q9H251 3354 aa6.63□□□□□ -1.35
SMARCE1-202ENST00000348513 KRTAP10-2P60368 255 aa6.62□□□□□ -1.35
SMARCE1-202ENST00000348513 PANO1I0J062 215 aa6.61□□□□□ -1.35
SMARCE1-202ENST00000348513 Q5VSD8 79 aa6.61□□□□□ -1.35
SMARCE1-202ENST00000348513 KRTAP10-1P60331 282 aa6.61□□□□□ -1.35
SMARCE1-202ENST00000348513 SPRR1AP35321 89 aa6.6□□□□□ -1.35
SMARCE1-202ENST00000348513 KRTAP26-1Q6PEX3 210 aa6.6□□□□□ -1.35
SMARCE1-202ENST00000348513 ZNF292O60281 2723 aa6.59□□□□□ -1.35
SMARCE1-202ENST00000348513 STAB1Q9NY15 2570 aa6.58□□□□□ -1.36
SMARCE1-202ENST00000348513 DSPP15924 2871 aaKnown RBP6.57□□□□□ -1.36
SMARCE1-202ENST00000348513 SETXQ7Z333 2677 aaKnown RBP6.57□□□□□ -1.36
SMARCE1-202ENST00000348513 S4R3F8 94 aa6.56□□□□□ -1.36
SMARCE1-202ENST00000348513 CELSR3Q9NYQ7 3312 aa6.56□□□□□ -1.36
SMARCE1-202ENST00000348513 MAP1AP78559 2803 aaPredicted RBP6.53□□□□□ -1.36
SMARCE1-202ENST00000348513 KRTAP11-1Q8IUC1 163 aa6.52□□□□□ -1.36
SMARCE1-202ENST00000348513 VPS13AQ96RL7 3174 aa6.52□□□□□ -1.37
SMARCE1-202ENST00000348513 GCN1Q92616 2671 aaKnown RBP6.52□□□□□ -1.37
SMARCE1-202ENST00000348513 COL6A5A8TX70 2615 aa6.52□□□□□ -1.37
SMARCE1-202ENST00000348513 SPRR1BP22528 89 aa6.5□□□□□ -1.37
SMARCE1-202ENST00000348513 NBEAL1Q6ZS30 2694 aa6.5□□□□□ -1.37
SMARCE1-202ENST00000348513 FRYQ5TBA9 3013 aa6.47□□□□□ -1.37
SMARCE1-202ENST00000348513 IGSF10Q6WRI0 2623 aa6.46□□□□□ -1.38
SMARCE1-202ENST00000348513 UNC79Q9P2D8 2635 aa6.46□□□□□ -1.38
SMARCE1-202ENST00000348513 FREM2Q5SZK8 3169 aa6.46□□□□□ -1.38
SMARCE1-202ENST00000348513 SZT2Q5T011 3432 aa6.45□□□□□ -1.38
SMARCE1-202ENST00000348513 NBEAL2Q6ZNJ1 2754 aa6.45□□□□□ -1.38
SMARCE1-202ENST00000348513 NOTCH1P46531 2555 aa6.45□□□□□ -1.38
SMARCE1-202ENST00000348513 PLAC4Q8WY50 150 aa6.45□□□□□ -1.38
SMARCE1-202ENST00000348513 KRTAP4-16G5E9R7 235 aaPredicted RBP6.44□□□□□ -1.38
SMARCE1-202ENST00000348513 BAHCC1Q9P281 2608 aa6.44□□□□□ -1.38
SMARCE1-202ENST00000348513 R4GN34 69 aa6.43□□□□□ -1.38
SMARCE1-202ENST00000348513 DNAH14Q0VDD8 3507 aa6.43□□□□□ -1.38
SMARCE1-202ENST00000348513 VCANP13611 3396 aa6.38□□□□□ -1.39
SMARCE1-202ENST00000348513 UBR5O95071 2799 aaPredicted RBP6.37□□□□□ -1.39
SMARCE1-202ENST00000348513 LAMA1P25391 3075 aa6.36□□□□□ -1.39
SMARCE1-202ENST00000348513 COL6A3P12111 3177 aa6.33□□□□□ -1.4
SMARCE1-202ENST00000348513 M0QZ58 72 aa6.33□□□□□ -1.4
SMARCE1-202ENST00000348513 FLG2Q5D862 2391 aaPredicted RBP6.32□□□□□ -1.4
SMARCE1-202ENST00000348513 KALRNO60229 2985 aa6.32□□□□□ -1.4
SMARCE1-202ENST00000348513 ITPR2Q14571 2701 aa6.31□□□□□ -1.4
SMARCE1-202ENST00000348513 ATMQ13315 3056 aa6.3□□□□□ -1.4
SMARCE1-202ENST00000348513 TACC2O95359 2948 aa6.3□□□□□ -1.4
SMARCE1-202ENST00000348513 BOD1L1Q8NFC6 3051 aa6.28□□□□□ -1.4
SMARCE1-202ENST00000348513 ITPR1Q14643 2758 aa6.27□□□□□ -1.41
SMARCE1-202ENST00000348513 FRYLO94915 3013 aa6.27□□□□□ -1.41
SMARCE1-202ENST00000348513 Q6ZRN7 208 aaPredicted RBP6.26□□□□□ -1.41
SMARCE1-202ENST00000348513 REV3LO60673 3130 aa6.26□□□□□ -1.41
SMARCE1-202ENST00000348513 LRBAP50851 2863 aa6.26□□□□□ -1.41
SMARCE1-202ENST00000348513 DMXL2Q8TDJ6 3036 aa6.26□□□□□ -1.41
SMARCE1-202ENST00000348513 COL12A1Q99715 3063 aa6.25□□□□□ -1.41
SMARCE1-202ENST00000348513 C10orf95Q9H7T3 257 aa6.25□□□□□ -1.41
SMARCE1-202ENST00000348513 KRTAP7-1Q8IUC3 87 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms