RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 NKAPP1Q8N9T2 125 aa5.92□□□□□ -1.46
ATG4A-202ENST00000345734 C7orf33Q8WU49 177 aa5.92□□□□□ -1.46
ATG4A-202ENST00000345734 ORMDL1Q9P0S3 153 aa5.92□□□□□ -1.46
ATG4A-202ENST00000345734 ALMS1Q8TCU4 4167 aa5.91□□□□□ -1.46
ATG4A-202ENST00000345734 Q6ZRN7 208 aaPredicted RBP5.91□□□□□ -1.46
ATG4A-202ENST00000345734 FRAS1Q86XX4 4008 aa5.91□□□□□ -1.46
ATG4A-202ENST00000345734 LRCOL1A6NCL2 159 aa5.9□□□□□ -1.46
ATG4A-202ENST00000345734 CNBPP62633 177 aaKnown RBP5.9□□□□□ -1.46
ATG4A-202ENST00000345734 LINC00846Q9NV44 126 aa5.9□□□□□ -1.46
ATG4A-202ENST00000345734 COX7BP24311 80 aa5.9□□□□□ -1.47
ATG4A-202ENST00000345734 LINC00474Q9P2X8 69 aa5.9□□□□□ -1.47
ATG4A-202ENST00000345734 A0A096LNI7 61 aa5.89□□□□□ -1.47
ATG4A-202ENST00000345734 RPL37AP8A6NKH3 93 aa5.89□□□□□ -1.47
ATG4A-202ENST00000345734 ELOF1P60002 83 aaKnown RBP5.89□□□□□ -1.47
ATG4A-202ENST00000345734 IGLV5-37A0A075B6J1 123 aa5.89□□□□□ -1.47
ATG4A-202ENST00000345734 F8WEM9 126 aa5.89□□□□□ -1.47
ATG4A-202ENST00000345734 C14orf177Q52M58 125 aa5.89□□□□□ -1.47
ATG4A-202ENST00000345734 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
ATG4A-202ENST00000345734 DNAH11Q96DT5 4516 aa5.88□□□□□ -1.47
ATG4A-202ENST00000345734 IGKV2-24A0A0C4DH68 120 aa5.88□□□□□ -1.47
ATG4A-202ENST00000345734 KCNQ1DNQ9H478 68 aa5.88□□□□□ -1.47
ATG4A-202ENST00000345734 HYDINQ4G0P3 5121 aa5.88□□□□□ -1.47
ATG4A-202ENST00000345734 DNAH8Q96JB1 4490 aa5.87□□□□□ -1.47
ATG4A-202ENST00000345734 C16orf90A8MZG2 172 aa5.87□□□□□ -1.47
ATG4A-202ENST00000345734 Q6ZQY7 126 aa5.87□□□□□ -1.47
ATG4A-202ENST00000345734 PRR26Q8N8Z3 221 aa5.87□□□□□ -1.47
ATG4A-202ENST00000345734 KRTAP9-9Q9BYP9 154 aa5.87□□□□□ -1.47
ATG4A-202ENST00000345734 C14orf132Q9NPU4 83 aa5.87□□□□□ -1.47
ATG4A-202ENST00000345734 IGLV1-50A0A075B6I6 118 aa5.86□□□□□ -1.47
ATG4A-202ENST00000345734 TMEM256-PLSCR3K7ERE1 68 aa5.86□□□□□ -1.47
ATG4A-202ENST00000345734 DNAH5Q8TE73 4624 aa5.86□□□□□ -1.47
ATG4A-202ENST00000345734 A0A1W2PNN7 141 aa5.86□□□□□ -1.47
ATG4A-202ENST00000345734 ERC2-IT1O76042 136 aa5.86□□□□□ -1.47
ATG4A-202ENST00000345734 CHTF8P0CG12 524 aa5.86□□□□□ -1.47
ATG4A-202ENST00000345734 KTN1-AS1Q86SY8 53 aa5.86□□□□□ -1.47
ATG4A-202ENST00000345734 MPLKIPQ8TAP9 179 aa5.86□□□□□ -1.47
ATG4A-202ENST00000345734 SEC61BP60468 96 aaKnown RBP5.85□□□□□ -1.47
ATG4A-202ENST00000345734 Q6ZR54 194 aa5.85□□□□□ -1.47
ATG4A-202ENST00000345734 FUSP35637 526 aaKnown RBP eCLIP5.84□□□□□ -1.47
ATG4A-202ENST00000345734 C9orf163Q8N9P6 203 aa5.84□□□□□ -1.47
ATG4A-202ENST00000345734 KRTAP4-16G5E9R7 235 aaPredicted RBP5.83□□□□□ -1.48
ATG4A-202ENST00000345734 Q1T7F1 81 aa5.83□□□□□ -1.48
ATG4A-202ENST00000345734 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.83□□□□□ -1.48
ATG4A-202ENST00000345734 RBM12B-AS1Q9P1G2 102 aa5.83□□□□□ -1.48
ATG4A-202ENST00000345734 SACSQ9NZJ4 4579 aa5.83□□□□□ -1.48
ATG4A-202ENST00000345734 A0A087WTM6 91 aa5.83□□□□□ -1.48
ATG4A-202ENST00000345734 LY6G6CO95867 125 aa5.83□□□□□ -1.48
ATG4A-202ENST00000345734 SPRR1AP35321 89 aa5.83□□□□□ -1.48
ATG4A-202ENST00000345734 FAT2Q9NYQ8 4349 aa5.82□□□□□ -1.48
ATG4A-202ENST00000345734 JMJD7-PLA2G4BH0Y9G9 81 aa5.81□□□□□ -1.48
ATG4A-202ENST00000345734 PANO1I0J062 215 aa5.81□□□□□ -1.48
ATG4A-202ENST00000345734 NDUFS5O43920 106 aa5.81□□□□□ -1.48
ATG4A-202ENST00000345734 Q9BRP9 147 aa5.81□□□□□ -1.48
ATG4A-202ENST00000345734 UBL5Q9BZL1 73 aa5.81□□□□□ -1.48
ATG4A-202ENST00000345734 ETDCA0A1B0GVM5 59 aa5.81□□□□□ -1.48
ATG4A-202ENST00000345734 Q6ZRX8 168 aa5.81□□□□□ -1.48
ATG4A-202ENST00000345734 TRBV7-4A0A0J9YYF1 115 aa5.8□□□□□ -1.48
ATG4A-202ENST00000345734 PHF5AQ7RTV0 110 aaKnown RBP5.8□□□□□ -1.48
ATG4A-202ENST00000345734 KRTAP9-3Q9BYQ3 159 aa5.8□□□□□ -1.48
ATG4A-202ENST00000345734 PKD1P98161 4303 aa5.8□□□□□ -1.48
ATG4A-202ENST00000345734 SRRM2Q9UQ35 2752 aaKnown RBP5.8□□□□□ -1.48
ATG4A-202ENST00000345734 REG3GQ6UW15 175 aa5.8□□□□□ -1.48
ATG4A-202ENST00000345734 UBE2BP63146 152 aa5.79□□□□□ -1.48
ATG4A-202ENST00000345734 FAM229BQ4G0N7 80 aa5.79□□□□□ -1.48
ATG4A-202ENST00000345734 C1orf134Q5TEV5 83 aa5.79□□□□□ -1.48
ATG4A-202ENST00000345734 Q75L30 129 aa5.79□□□□□ -1.48
ATG4A-202ENST00000345734 KRTAP11-1Q8IUC1 163 aa5.79□□□□□ -1.48
ATG4A-202ENST00000345734 SNURFQ9Y675 71 aa5.79□□□□□ -1.48
ATG4A-202ENST00000345734 H3BQ85 93 aa5.78□□□□□ -1.48
ATG4A-202ENST00000345734 DEFB105AQ8NG35 78 aa5.78□□□□□ -1.48
ATG4A-202ENST00000345734 DHRS4-AS1Q9P1J3 65 aa5.78□□□□□ -1.48
ATG4A-202ENST00000345734 IGLV5-52A0A0A0MRZ9 124 aa5.77□□□□□ -1.49
ATG4A-202ENST00000345734 Q6ZVQ6 151 aa5.77□□□□□ -1.49
ATG4A-202ENST00000345734 ST20-AS1Q8NBB2 130 aa5.77□□□□□ -1.49
ATG4A-202ENST00000345734 RTL8CO15255 209 aa5.77□□□□□ -1.49
ATG4A-202ENST00000345734 LINC01547P58512 204 aaPredicted RBP5.77□□□□□ -1.49
ATG4A-202ENST00000345734 Q6ZQT0 140 aa5.77□□□□□ -1.49
ATG4A-202ENST00000345734 Q8N377 158 aa5.77□□□□□ -1.49
ATG4A-202ENST00000345734 LOC110117498A0A087WWA1 95 aa5.75□□□□□ -1.49
ATG4A-202ENST00000345734 CXCL6P80162 114 aa5.75□□□□□ -1.49
ATG4A-202ENST00000345734 PRLHP81277 87 aa5.75□□□□□ -1.49
ATG4A-202ENST00000345734 TMEM254Q8TBM7 123 aa5.75□□□□□ -1.49
ATG4A-202ENST00000345734 SPACA4Q8TDM5 124 aa5.75□□□□□ -1.49
ATG4A-202ENST00000345734 hDV103S1A0JD37 113 aa5.73□□□□□ -1.49
ATG4A-202ENST00000345734 C3orf84H3BNL1 204 aa5.73□□□□□ -1.49
ATG4A-202ENST00000345734 IGLV5-48A0A075B6I7 105 aa5.72□□□□□ -1.49
ATG4A-202ENST00000345734 NREPQ16612 68 aa5.71□□□□□ -1.5
ATG4A-202ENST00000345734 HIGD2AQ9BW72 106 aa5.71□□□□□ -1.5
ATG4A-202ENST00000345734 PDE6GP18545 87 aa5.71□□□□□ -1.5
ATG4A-202ENST00000345734 C8orf87E5RJ46 101 aa5.7□□□□□ -1.5
ATG4A-202ENST00000345734 UBE2AP49459 152 aa5.7□□□□□ -1.5
ATG4A-202ENST00000345734 LRP1BQ9NZR2 4599 aa5.69□□□□□ -1.5
ATG4A-202ENST00000345734 ATP11AUNQ6ZP68 121 aa5.69□□□□□ -1.5
ATG4A-202ENST00000345734 SMIM29Q86T20 159 aa5.69□□□□□ -1.5
ATG4A-202ENST00000345734 PKHD1P08F94 4074 aa5.68□□□□□ -1.5
ATG4A-202ENST00000345734 H0Y9J4 135 aa5.68□□□□□ -1.5
ATG4A-202ENST00000345734 PLAC8Q9NZF1 115 aa5.68□□□□□ -1.5
ATG4A-202ENST00000345734 TRAV22A0A0B4J277 110 aa5.67□□□□□ -1.5
ATG4A-202ENST00000345734 C7orf65Q6ZTY9 151 aa5.66□□□□□ -1.5
ATG4A-202ENST00000345734 LCA10Q71F78 164 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms