RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 C3orf22Q8N5N4 141 aa12.93□□□□□ -0.34
RBM38-201ENST00000342690 IGLV9-49A0A0B4J1Y8 123 aa12.92□□□□□ -0.34
RBM38-201ENST00000342690 C9orf118A6NHY6 69 aa12.92□□□□□ -0.34
RBM38-201ENST00000342690 H3BUT2 72 aa12.92□□□□□ -0.34
RBM38-201ENST00000342690 TAX1BP3O14907 124 aa12.92□□□□□ -0.34
RBM38-201ENST00000342690 Q8N377 158 aa12.91□□□□□ -0.34
RBM38-201ENST00000342690 PPDPFLQ8WWR9 84 aa12.91□□□□□ -0.34
RBM38-201ENST00000342690 GHRHP01286 108 aa12.9□□□□□ -0.34
RBM38-201ENST00000342690 LST1O00453 97 aa12.89□□□□□ -0.35
RBM38-201ENST00000342690 C9orf153Q5TBE3 101 aa12.89□□□□□ -0.35
RBM38-201ENST00000342690 TRACP01848 142 aa12.88□□□□□ -0.35
RBM38-201ENST00000342690 MOBPQ13875 183 aa12.88□□□□□ -0.35
RBM38-201ENST00000342690 ATXN8Q156A1 80 aa12.86□□□□□ -0.35
RBM38-201ENST00000342690 Q8NBF4 154 aa12.86□□□□□ -0.35
RBM38-201ENST00000342690 F8WEM9 126 aa12.85□□□□□ -0.35
RBM38-201ENST00000342690 SMIM29Q86T20 159 aa12.85□□□□□ -0.35
RBM38-201ENST00000342690 ORMDL1Q9P0S3 153 aa12.85□□□□□ -0.35
RBM38-201ENST00000342690 TCL1BO95988 128 aa12.84□□□□□ -0.35
RBM38-201ENST00000342690 A0A1W2PPM0 123 aa12.83□□□□□ -0.36
RBM38-201ENST00000342690 H3BQ85 93 aa12.83□□□□□ -0.36
RBM38-201ENST00000342690 SSBP3-AS1Q7Z2R9 100 aa12.83□□□□□ -0.36
RBM38-201ENST00000342690 TRBV20-1A0A075B6N2 111 aa12.82□□□□□ -0.36
RBM38-201ENST00000342690 FABP2P12104 132 aa12.82□□□□□ -0.36
RBM38-201ENST00000342690 LINC00304Q8N9R0 145 aa12.81□□□□□ -0.36
RBM38-201ENST00000342690 TMEM256-PLSCR3K7ERE1 68 aa12.77□□□□□ -0.37
RBM38-201ENST00000342690 C4orf48Q5BLP8 95 aa12.76□□□□□ -0.37
RBM38-201ENST00000342690 NDUFV3P56181 108 aaKnown RBP12.75□□□□□ -0.37
RBM38-201ENST00000342690 SPAG11AQ6PDA7 123 aa12.75□□□□□ -0.37
RBM38-201ENST00000342690 IGLV8-61A0A075B6I0 122 aa12.71□□□□□ -0.37
RBM38-201ENST00000342690 BAALC-AS2P0C853 105 aa12.71□□□□□ -0.37
RBM38-201ENST00000342690 Q6JHZ5 121 aa12.71□□□□□ -0.37
RBM38-201ENST00000342690 SPCS1Q9Y6A9 102 aa12.71□□□□□ -0.37
RBM38-201ENST00000342690 UBE2V1Q13404 147 aa12.69□□□□□ -0.38
RBM38-201ENST00000342690 C9JAW5 83 aa12.68□□□□□ -0.38
RBM38-201ENST00000342690 H3BMG7 143 aa12.67□□□□□ -0.38
RBM38-201ENST00000342690 SPINK1P00995 79 aa12.67□□□□□ -0.38
RBM38-201ENST00000342690 HMCN2Q8NDA2 5059 aa12.66□□□□□ -0.38
RBM38-201ENST00000342690 CD164Q04900 197 aa12.64□□□□□ -0.39
RBM38-201ENST00000342690 IGFL1Q6UW32 110 aa12.64□□□□□ -0.39
RBM38-201ENST00000342690 HRCT1Q6UXD1 115 aa12.64□□□□□ -0.39
RBM38-201ENST00000342690 ANKRD29Q8N6D5 301 aa12.64□□□□□ -0.39
RBM38-201ENST00000342690 A0A0G2JQZ4 141 aa12.62□□□□□ -0.39
RBM38-201ENST00000342690 A0A1B0GV72 72 aa12.61□□□□□ -0.39
RBM38-201ENST00000342690 K7EP34 96 aa12.61□□□□□ -0.39
RBM38-201ENST00000342690 RPS29P62273 56 aaKnown RBP12.61□□□□□ -0.39
RBM38-201ENST00000342690 H3BT86 120 aa12.59□□□□□ -0.39
RBM38-201ENST00000342690 GTF2H5Q6ZYL4 71 aa12.59□□□□□ -0.39
RBM38-201ENST00000342690 LIMD2Q9BT23 127 aa12.58□□□□□ -0.4
RBM38-201ENST00000342690 MTURNQ8N3F0 131 aa12.57□□□□□ -0.4
RBM38-201ENST00000342690 RBM3P98179 157 aaKnown RBP12.56□□□□□ -0.4
RBM38-201ENST00000342690 JMJD7-PLA2G4BH0Y9G9 81 aa12.54□□□□□ -0.4
RBM38-201ENST00000342690 DSCR8Q96T75 97 aa12.53□□□□□ -0.4
RBM38-201ENST00000342690 RETNLBQ9BQ08 111 aa12.53□□□□□ -0.4
RBM38-201ENST00000342690 PRR4Q16378 134 aa12.52□□□□□ -0.41
RBM38-201ENST00000342690 TEN1Q86WV5 123 aa12.52□□□□□ -0.41
RBM38-201ENST00000342690 TRBV7-7A0A0K0K1E9 115 aa12.5□□□□□ -0.41
RBM38-201ENST00000342690 Q6Q795 121 aa12.5□□□□□ -0.41
RBM38-201ENST00000342690 TRBV7-4A0A0J9YYF1 115 aa12.49□□□□□ -0.41
RBM38-201ENST00000342690 Q5XG85 94 aa12.47□□□□□ -0.41
RBM38-201ENST00000342690 CCKP06307 115 aa12.46□□□□□ -0.41
RBM38-201ENST00000342690 A0A1W2PNM2 257 aa12.45□□□□□ -0.42
RBM38-201ENST00000342690 PRO0461Q9UI25 63 aa12.45□□□□□ -0.42
RBM38-201ENST00000342690 OBSCN-AS1Q96MR7 158 aa12.44□□□□□ -0.42
RBM38-201ENST00000342690 SMCPP49901 116 aaPredicted RBP12.43□□□□□ -0.42
RBM38-201ENST00000342690 VPS25Q9BRG1 176 aa12.43□□□□□ -0.42
RBM38-201ENST00000342690 PDE6GP18545 87 aa12.42□□□□□ -0.42
RBM38-201ENST00000342690 C14orf132Q9NPU4 83 aa12.42□□□□□ -0.42
RBM38-201ENST00000342690 SS18L2Q9UHA2 77 aa12.42□□□□□ -0.42
RBM38-201ENST00000342690 LOC110117498A0A087WWA1 95 aa12.41□□□□□ -0.42
RBM38-201ENST00000342690 F8W1H4 67 aa12.4□□□□□ -0.42
RBM38-201ENST00000342690 FP248Q71RG6 208 aaPredicted RBP12.4□□□□□ -0.42
RBM38-201ENST00000342690 A0A087WSZ3 146 aa12.39□□□□□ -0.43
RBM38-201ENST00000342690 C21orf62-AS1Q17RA5 79 aa12.39□□□□□ -0.43
RBM38-201ENST00000342690 Q6ZQT0 140 aa12.39□□□□□ -0.43
RBM38-201ENST00000342690 ASB16-AS1Q495Z4 193 aa12.37□□□□□ -0.43
RBM38-201ENST00000342690 IGLV7-46A0A075B6I9 117 aa12.36□□□□□ -0.43
RBM38-201ENST00000342690 A0A1B0GV90 55 aa12.36□□□□□ -0.43
RBM38-201ENST00000342690 LRP2P98164 4655 aa12.35□□□□□ -0.43
RBM38-201ENST00000342690 LPAP08519 4548 aa12.33□□□□□ -0.44
RBM38-201ENST00000342690 C1orf195Q5TG92 126 aa12.33□□□□□ -0.44
RBM38-201ENST00000342690 A0A1B0GW54 56 aa12.3□□□□□ -0.44
RBM38-201ENST00000342690 TPRXLQ17RH7 258 aa12.28□□□□□ -0.44
RBM38-201ENST00000342690 ETDBQ3ZM63 59 aa12.25□□□□□ -0.45
RBM38-201ENST00000342690 KRTAP13-3Q3SY46 172 aa12.21□□□□□ -0.45
RBM38-201ENST00000342690 Q96NJ1 140 aa12.2□□□□□ -0.46
RBM38-201ENST00000342690 UBR4Q5T4S7 5183 aa12.18□□□□□ -0.46
RBM38-201ENST00000342690 CDIP1Q9H305 208 aa12.17□□□□□ -0.46
RBM38-201ENST00000342690 SIGMAR1Q99720 223 aa12.16□□□□□ -0.46
RBM38-201ENST00000342690 LINC00472Q9H8W2 130 aa12.15□□□□□ -0.46
RBM38-201ENST00000342690 IGKV4-1P06312 121 aa12.14□□□□□ -0.47
RBM38-201ENST00000342690 NREPQ16612 68 aa12.13□□□□□ -0.47
RBM38-201ENST00000342690 DEFB116Q30KQ4 102 aa12.12□□□□□ -0.47
RBM38-201ENST00000342690 J3KT08 172 aa12.1□□□□□ -0.47
RBM38-201ENST00000342690 C9orf92A6NGG3 77 aa12.09□□□□□ -0.47
RBM38-201ENST00000342690 UBL5Q9BZL1 73 aa12.03□□□□□ -0.48
RBM38-201ENST00000342690 XP32Q5T750 250 aa12.02□□□□□ -0.49
RBM38-201ENST00000342690 Q6ZVQ6 151 aa12.02□□□□□ -0.49
RBM38-201ENST00000342690 LINC00846Q9NV44 126 aa12.02□□□□□ -0.49
RBM38-201ENST00000342690 NDUFB1O75438 58 aa11.99□□□□□ -0.49
RBM38-201ENST00000342690 IGHV6-1A0A0B4J1U7 121 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms