RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 LRP1BQ9NZR2 4599 aa4.58□□□□□ -1.68
SRFBP1-201ENST00000339397 ALMS1Q8TCU4 4167 aa4.57□□□□□ -1.68
SRFBP1-201ENST00000339397 IGLV5-48A0A075B6I7 105 aa4.57□□□□□ -1.68
SRFBP1-201ENST00000339397 IGLV5-52A0A0A0MRZ9 124 aa4.57□□□□□ -1.68
SRFBP1-201ENST00000339397 C3orf84H3BNL1 204 aa4.57□□□□□ -1.68
SRFBP1-201ENST00000339397 FAM30AQ9NZY2 134 aa4.57□□□□□ -1.68
SRFBP1-201ENST00000339397 FAM236AA0A1B0GUQ0 79 aa4.56□□□□□ -1.68
SRFBP1-201ENST00000339397 FAM236BA0A1B0GV22 79 aa4.56□□□□□ -1.68
SRFBP1-201ENST00000339397 SCXQ7RTU7 201 aa4.56□□□□□ -1.68
SRFBP1-201ENST00000339397 LINC00474Q9P2X8 69 aa4.56□□□□□ -1.68
SRFBP1-201ENST00000339397 Q6ZVQ6 151 aa4.56□□□□□ -1.68
SRFBP1-201ENST00000339397 A0A1W2PNM2 257 aa4.55□□□□□ -1.68
SRFBP1-201ENST00000339397 H3BQ85 93 aa4.55□□□□□ -1.68
SRFBP1-201ENST00000339397 KMT2CQ8NEZ4 4911 aaKnown RBP4.55□□□□□ -1.68
SRFBP1-201ENST00000339397 UBE2AP49459 152 aa4.55□□□□□ -1.68
SRFBP1-201ENST00000339397 HIST1H4AP62805 103 aaKnown RBP4.55□□□□□ -1.68
SRFBP1-201ENST00000339397 C1orf137Q5JT78 98 aa4.55□□□□□ -1.68
SRFBP1-201ENST00000339397 UBL5Q9BZL1 73 aa4.55□□□□□ -1.68
SRFBP1-201ENST00000339397 VPS13BQ7Z7G8 4022 aa4.54□□□□□ -1.68
SRFBP1-201ENST00000339397 Q6JHZ5 121 aa4.54□□□□□ -1.68
SRFBP1-201ENST00000339397 PSORS1C2Q9UIG4 136 aa4.54□□□□□ -1.68
SRFBP1-201ENST00000339397 BCE1O60756 84 aa4.53□□□□□ -1.68
SRFBP1-201ENST00000339397 PDE6GP18545 87 aa4.53□□□□□ -1.68
SRFBP1-201ENST00000339397 KRTAP13-1Q8IUC0 172 aa4.53□□□□□ -1.68
SRFBP1-201ENST00000339397 Q8N9L7 120 aa4.53□□□□□ -1.68
SRFBP1-201ENST00000339397 ANAPC11Q9NYG5 84 aa4.53□□□□□ -1.68
SRFBP1-201ENST00000339397 SMIM20Q8N5G0 67 aa4.53□□□□□ -1.68
SRFBP1-201ENST00000339397 UQCRQO14949 82 aa4.52□□□□□ -1.69
SRFBP1-201ENST00000339397 C9orf153Q5TBE3 101 aa4.52□□□□□ -1.69
SRFBP1-201ENST00000339397 PLAC8Q9NZF1 115 aa4.52□□□□□ -1.69
SRFBP1-201ENST00000339397 KRTAP10-1P60331 282 aa4.51□□□□□ -1.69
SRFBP1-201ENST00000339397 IGFL1Q6UW32 110 aa4.51□□□□□ -1.69
SRFBP1-201ENST00000339397 CIRBP-AS1Q8TBR5 109 aa4.51□□□□□ -1.69
SRFBP1-201ENST00000339397 RYR3Q15413 4870 aa4.51□□□□□ -1.69
SRFBP1-201ENST00000339397 H0Y9J4 135 aa4.51□□□□□ -1.69
SRFBP1-201ENST00000339397 ATOX1O00244 68 aa4.5□□□□□ -1.69
SRFBP1-201ENST00000339397 COX7CP15954 63 aa4.5□□□□□ -1.69
SRFBP1-201ENST00000339397 DEFB116Q30KQ4 102 aa4.5□□□□□ -1.69
SRFBP1-201ENST00000339397 NREPQ16612 68 aa4.49□□□□□ -1.69
SRFBP1-201ENST00000339397 Q8NBF4 154 aa4.49□□□□□ -1.69
SRFBP1-201ENST00000339397 PKIGQ9Y2B9 76 aa4.49□□□□□ -1.69
SRFBP1-201ENST00000339397 IGLV9-49A0A0B4J1Y8 123 aa4.48□□□□□ -1.69
SRFBP1-201ENST00000339397 F8WEM9 126 aa4.48□□□□□ -1.69
SRFBP1-201ENST00000339397 BPY2O14599 106 aa4.48□□□□□ -1.69
SRFBP1-201ENST00000339397 SPRR4Q96PI1 79 aa4.48□□□□□ -1.69
SRFBP1-201ENST00000339397 CRYGAP11844 174 aa4.47□□□□□ -1.69
SRFBP1-201ENST00000339397 A0A087WSZ3 146 aa4.47□□□□□ -1.69
SRFBP1-201ENST00000339397 SPRR1BP22528 89 aa4.47□□□□□ -1.69
SRFBP1-201ENST00000339397 ATP5EP2Q5VTU8 51 aa4.46□□□□□ -1.7
SRFBP1-201ENST00000339397 IGLV8-61A0A075B6I0 122 aa4.46□□□□□ -1.7
SRFBP1-201ENST00000339397 ZNF861PO60384 105 aa4.46□□□□□ -1.7
SRFBP1-201ENST00000339397 CXCL6P80162 114 aa4.45□□□□□ -1.7
SRFBP1-201ENST00000339397 HRCT1Q6UXD1 115 aa4.45□□□□□ -1.7
SRFBP1-201ENST00000339397 FAT1Q14517 4588 aa4.45□□□□□ -1.7
SRFBP1-201ENST00000339397 SERP2Q8N6R1 65 aa4.45□□□□□ -1.7
SRFBP1-201ENST00000339397 DYNC1H1Q14204 4646 aaKnown RBP4.44□□□□□ -1.7
SRFBP1-201ENST00000339397 PLA2G1BP04054 148 aaKnown RBP4.44□□□□□ -1.7
SRFBP1-201ENST00000339397 Q6ZSA8 131 aa4.44□□□□□ -1.7
SRFBP1-201ENST00000339397 IGLV7-43P04211 117 aa4.44□□□□□ -1.7
SRFBP1-201ENST00000339397 IGKV4-1P06312 121 aa4.44□□□□□ -1.7
SRFBP1-201ENST00000339397 CYSTM1Q9H1C7 97 aa4.44□□□□□ -1.7
SRFBP1-201ENST00000339397 DSCR10P59022 87 aa4.43□□□□□ -1.7
SRFBP1-201ENST00000339397 RPL37AP61513 92 aaKnown RBP4.43□□□□□ -1.7
SRFBP1-201ENST00000339397 RYR2Q92736 4967 aa4.43□□□□□ -1.7
SRFBP1-201ENST00000339397 J3KT08 172 aa4.43□□□□□ -1.7
SRFBP1-201ENST00000339397 K7EQZ3 153 aa4.42□□□□□ -1.7
SRFBP1-201ENST00000339397 RPS28P62857 69 aaKnown RBP4.42□□□□□ -1.7
SRFBP1-201ENST00000339397 MOBPQ13875 183 aa4.42□□□□□ -1.7
SRFBP1-201ENST00000339397 LCE6AA0A183 80 aa4.42□□□□□ -1.7
SRFBP1-201ENST00000339397 LINC00483Q53H64 154 aa4.42□□□□□ -1.7
SRFBP1-201ENST00000339397 TMEM258P61165 79 aa4.41□□□□□ -1.7
SRFBP1-201ENST00000339397 SMR3BP02814 79 aaPredicted RBP4.39□□□□□ -1.71
SRFBP1-201ENST00000339397 PRR26Q8N8Z3 221 aa4.39□□□□□ -1.71
SRFBP1-201ENST00000339397 APOBP04114 4563 aaKnown RBP4.39□□□□□ -1.71
SRFBP1-201ENST00000339397 A0A087X002 238 aa4.39□□□□□ -1.71
SRFBP1-201ENST00000339397 A0A1B0GW54 56 aa4.39□□□□□ -1.71
SRFBP1-201ENST00000339397 LINC00472Q9H8W2 130 aa4.38□□□□□ -1.71
SRFBP1-201ENST00000339397 BIRC6Q9NR09 4857 aa4.37□□□□□ -1.71
SRFBP1-201ENST00000339397 A0A1B0GVY2 172 aa4.37□□□□□ -1.71
SRFBP1-201ENST00000339397 ZNF706Q9Y5V0 76 aaPredicted RBP4.37□□□□□ -1.71
SRFBP1-201ENST00000339397 EPPK1P58107 5090 aaKnown RBP4.37□□□□□ -1.71
SRFBP1-201ENST00000339397 Q96NJ1 140 aa4.36□□□□□ -1.71
SRFBP1-201ENST00000339397 KRTAP13-2Q52LG2 175 aa4.35□□□□□ -1.71
SRFBP1-201ENST00000339397 C20orf197Q8N268 126 aa4.35□□□□□ -1.71
SRFBP1-201ENST00000339397 WFDC13Q8IUB5 93 aa4.35□□□□□ -1.71
SRFBP1-201ENST00000339397 SNURFQ9Y675 71 aa4.35□□□□□ -1.71
SRFBP1-201ENST00000339397 TRAV7A0A075B6U4 112 aa4.34□□□□□ -1.71
SRFBP1-201ENST00000339397 KRTAP1-4P0C5Y4 121 aa4.34□□□□□ -1.71
SRFBP1-201ENST00000339397 OCR1Q9BZK8 76 aa4.34□□□□□ -1.71
SRFBP1-201ENST00000339397 C5orf47Q569G3 176 aa4.33□□□□□ -1.72
SRFBP1-201ENST00000339397 LINC00336Q6ZUF6 198 aa4.33□□□□□ -1.72
SRFBP1-201ENST00000339397 PRR15Q8IV56 129 aa4.32□□□□□ -1.72
SRFBP1-201ENST00000339397 HCG22E2RYF7 251 aa4.32□□□□□ -1.72
SRFBP1-201ENST00000339397 SPINK6Q6UWN8 80 aa4.32□□□□□ -1.72
SRFBP1-201ENST00000339397 NOTCH2NLQ7Z3S9 236 aa4.32□□□□□ -1.72
SRFBP1-201ENST00000339397 KRTAP17-1Q9BYP8 105 aa4.32□□□□□ -1.72
SRFBP1-201ENST00000339397 A8MWP4 228 aa4.31□□□□□ -1.72
SRFBP1-201ENST00000339397 OXTP01178 125 aa4.31□□□□□ -1.72
SRFBP1-201ENST00000339397 LCE2CQ5TA81 110 aa4.31□□□□□ -1.72
SRFBP1-201ENST00000339397 FAM236DA0A1B0GTK5 79 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms