RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.67□□□□□ -0.7
TRAPPC11-201ENST00000334690 SMR3BP02814 79 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC11-201ENST00000334690 C9orf92A6NGG3 77 aa10.64□□□□□ -0.71
TRAPPC11-201ENST00000334690 TNP2Q05952 138 aa10.63□□□□□ -0.71
TRAPPC11-201ENST00000334690 Q1T7F1 81 aa10.63□□□□□ -0.71
TRAPPC11-201ENST00000334690 SPRR1BP22528 89 aa10.61□□□□□ -0.71
TRAPPC11-201ENST00000334690 IGLV7-46A0A075B6I9 117 aa10.61□□□□□ -0.71
TRAPPC11-201ENST00000334690 NBEAQ8NFP9 2946 aa10.61□□□□□ -0.71
TRAPPC11-201ENST00000334690 KRTAP26-1Q6PEX3 210 aa10.6□□□□□ -0.71
TRAPPC11-201ENST00000334690 ITPR1Q14643 2758 aa10.59□□□□□ -0.71
TRAPPC11-201ENST00000334690 KTN1-AS1Q86SY8 53 aa10.58□□□□□ -0.72
TRAPPC11-201ENST00000334690 PRR26Q8N8Z3 221 aa10.58□□□□□ -0.72
TRAPPC11-201ENST00000334690 CDH23Q9H251 3354 aa10.58□□□□□ -0.72
TRAPPC11-201ENST00000334690 NSD1Q96L73 2696 aaPredicted RBP10.57□□□□□ -0.72
TRAPPC11-201ENST00000334690 CDC42SE1Q9NRR8 79 aa10.57□□□□□ -0.72
TRAPPC11-201ENST00000334690 MMP24-AS1A0A0U1RRL7 71 aa10.56□□□□□ -0.72
TRAPPC11-201ENST00000334690 PLAC8Q9NZF1 115 aa10.56□□□□□ -0.72
TRAPPC11-201ENST00000334690 FAM229BQ4G0N7 80 aa10.55□□□□□ -0.72
TRAPPC11-201ENST00000334690 CYSTM1Q9H1C7 97 aa10.54□□□□□ -0.72
TRAPPC11-201ENST00000334690 LAMA1P25391 3075 aa10.54□□□□□ -0.72
TRAPPC11-201ENST00000334690 KALRNO60229 2985 aa10.53□□□□□ -0.72
TRAPPC11-201ENST00000334690 LINC00472Q9H8W2 130 aa10.52□□□□□ -0.73
TRAPPC11-201ENST00000334690 Q8N1X5 172 aa10.52□□□□□ -0.73
TRAPPC11-201ENST00000334690 STAB2Q8WWQ8 2551 aa10.52□□□□□ -0.73
TRAPPC11-201ENST00000334690 ATMQ13315 3056 aa10.51□□□□□ -0.73
TRAPPC11-201ENST00000334690 LCA10Q71F78 164 aa10.49□□□□□ -0.73
TRAPPC11-201ENST00000334690 J3QL48 77 aa10.49□□□□□ -0.73
TRAPPC11-201ENST00000334690 FREM2Q5SZK8 3169 aa10.49□□□□□ -0.73
TRAPPC11-201ENST00000334690 KRTAP1-5Q9BYS1 174 aa10.48□□□□□ -0.73
TRAPPC11-201ENST00000334690 CELSR3Q9NYQ7 3312 aa10.48□□□□□ -0.73
TRAPPC11-201ENST00000334690 TACC2O95359 2948 aa10.48□□□□□ -0.73
TRAPPC11-201ENST00000334690 ADGRG4Q8IZF6 3080 aa10.47□□□□□ -0.73
TRAPPC11-201ENST00000334690 HRES1P13985 223 aa10.47□□□□□ -0.73
TRAPPC11-201ENST00000334690 FRYLO94915 3013 aa10.47□□□□□ -0.73
TRAPPC11-201ENST00000334690 Q5XG85 94 aa10.46□□□□□ -0.74
TRAPPC11-201ENST00000334690 SPINT4Q6UDR6 99 aa10.45□□□□□ -0.74
TRAPPC11-201ENST00000334690 ITPR2Q14571 2701 aa10.45□□□□□ -0.74
TRAPPC11-201ENST00000334690 FP248Q71RG6 208 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC11-201ENST00000334690 Q8N9P0 234 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC11-201ENST00000334690 COL12A1Q99715 3063 aa10.42□□□□□ -0.74
TRAPPC11-201ENST00000334690 CRIPTQ9P021 101 aa10.42□□□□□ -0.74
TRAPPC11-201ENST00000334690 Q75L30 129 aa10.41□□□□□ -0.74
TRAPPC11-201ENST00000334690 RBM12B-AS1Q9P1G2 102 aa10.4□□□□□ -0.74
TRAPPC11-201ENST00000334690 VCANP13611 3396 aa10.39□□□□□ -0.75
TRAPPC11-201ENST00000334690 COX6B2Q6YFQ2 88 aa10.39□□□□□ -0.75
TRAPPC11-201ENST00000334690 FLG2Q5D862 2391 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC11-201ENST00000334690 LINC01558Q9Y6Z2 57 aa10.39□□□□□ -0.75
TRAPPC11-201ENST00000334690 KRTAP4-16G5E9R7 235 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC11-201ENST00000334690 DMXL2Q8TDJ6 3036 aa10.38□□□□□ -0.75
TRAPPC11-201ENST00000334690 BAHCC1Q9P281 2608 aa10.37□□□□□ -0.75
TRAPPC11-201ENST00000334690 SZT2Q5T011 3432 aa10.37□□□□□ -0.75
TRAPPC11-201ENST00000334690 BOD1L1Q8NFC6 3051 aa10.36□□□□□ -0.75
TRAPPC11-201ENST00000334690 ZCCHC13Q8WW36 166 aaKnown RBP10.32□□□□□ -0.76
TRAPPC11-201ENST00000334690 UTP20O75691 2785 aaKnown RBP10.29□□□□□ -0.76
TRAPPC11-201ENST00000334690 Q5W150 140 aa10.29□□□□□ -0.76
TRAPPC11-201ENST00000334690 NIPBLQ6KC79 2804 aaeCLIP10.29□□□□□ -0.76
TRAPPC11-201ENST00000334690 LRBAP50851 2863 aa10.28□□□□□ -0.76
TRAPPC11-201ENST00000334690 A0A1B0GU33 70 aa10.28□□□□□ -0.76
TRAPPC11-201ENST00000334690 ASH1LQ9NR48 2969 aaKnown RBP10.27□□□□□ -0.77
TRAPPC11-201ENST00000334690 DMBT1Q9UGM3 2413 aaPredicted RBP10.27□□□□□ -0.77
TRAPPC11-201ENST00000334690 A0A0D9SG42 100 aa10.26□□□□□ -0.77
TRAPPC11-201ENST00000334690 ZZEF1O43149 2961 aa10.26□□□□□ -0.77
TRAPPC11-201ENST00000334690 LINC00483Q53H64 154 aa10.26□□□□□ -0.77
TRAPPC11-201ENST00000334690 OXTP01178 125 aa10.25□□□□□ -0.77
TRAPPC11-201ENST00000334690 Q5VV11 94 aa10.24□□□□□ -0.77
TRAPPC11-201ENST00000334690 KRTAP29-1A8MX34 341 aaPredicted RBP10.21□□□□□ -0.77
TRAPPC11-201ENST00000334690 Q6ZSA8 131 aa10.2□□□□□ -0.78
TRAPPC11-201ENST00000334690 HIVEP1P15822 2718 aa10.18□□□□□ -0.78
TRAPPC11-201ENST00000334690 LINC01554Q52M75 96 aa10.18□□□□□ -0.78
TRAPPC11-201ENST00000334690 PANO1I0J062 215 aa10.17□□□□□ -0.78
TRAPPC11-201ENST00000334690 DNAH14Q0VDD8 3507 aa10.16□□□□□ -0.78
TRAPPC11-201ENST00000334690 Q6ZR54 194 aa10.16□□□□□ -0.78
TRAPPC11-201ENST00000334690 ZANQ9Y493 2812 aa10.15□□□□□ -0.78
TRAPPC11-201ENST00000334690 APCP25054 2843 aa10.15□□□□□ -0.78
TRAPPC11-201ENST00000334690 KMT2BQ9UMN6 2715 aaPredicted RBP10.15□□□□□ -0.78
TRAPPC11-201ENST00000334690 CELSR2Q9HCU4 2923 aa10.15□□□□□ -0.79
TRAPPC11-201ENST00000334690 SPINK7P58062 85 aa10.13□□□□□ -0.79
TRAPPC11-201ENST00000334690 KRTAP10-1P60331 282 aa10.13□□□□□ -0.79
TRAPPC11-201ENST00000334690 KRTAP10-2P60368 255 aa10.11□□□□□ -0.79
TRAPPC11-201ENST00000334690 DMAC1Q96GE9 116 aa10.11□□□□□ -0.79
TRAPPC11-201ENST00000334690 REV3LO60673 3130 aa10.1□□□□□ -0.79
TRAPPC11-201ENST00000334690 COL6A3P12111 3177 aa10.06□□□□□ -0.8
TRAPPC11-201ENST00000334690 CFAP47Q6ZTR5 3102 aa10.06□□□□□ -0.8
TRAPPC11-201ENST00000334690 CSAG1Q6PB30 78 aa10.05□□□□□ -0.8
TRAPPC11-201ENST00000334690 KRTAP7-1Q8IUC3 87 aa10.02□□□□□ -0.81
TRAPPC11-201ENST00000334690 DCHS2Q6V1P9 2916 aa10□□□□□ -0.81
TRAPPC11-201ENST00000334690 LCE6AA0A183 80 aa9.99□□□□□ -0.81
TRAPPC11-201ENST00000334690 Q6ZRN7 208 aaPredicted RBP9.99□□□□□ -0.81
TRAPPC11-201ENST00000334690 KRTAP11-1Q8IUC1 163 aa9.99□□□□□ -0.81
TRAPPC11-201ENST00000334690 TENM4Q6N022 2769 aa9.99□□□□□ -0.81
TRAPPC11-201ENST00000334690 S4R3F8 94 aa9.98□□□□□ -0.81
TRAPPC11-201ENST00000334690 A0A087X002 238 aa9.98□□□□□ -0.81
TRAPPC11-201ENST00000334690 ASB16-AS1Q495Z4 193 aa9.97□□□□□ -0.81
TRAPPC11-201ENST00000334690 PRAC1Q96KF2 57 aa9.97□□□□□ -0.81
TRAPPC11-201ENST00000334690 EYSQ5T1H1 3165 aa9.95□□□□□ -0.82
TRAPPC11-201ENST00000334690 CAMK2N1Q7Z7J9 78 aa9.93□□□□□ -0.82
TRAPPC11-201ENST00000334690 NOTCH2NLQ7Z3S9 236 aa9.92□□□□□ -0.82
TRAPPC11-201ENST00000334690 NF1P21359 2839 aa9.92□□□□□ -0.82
TRAPPC11-201ENST00000334690 HRNRQ86YZ3 2850 aaPredicted RBP9.89□□□□□ -0.83
TRAPPC11-201ENST00000334690 Q5VSD8 79 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms