RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 HRCT1Q6UXD1 115 aa15.48■□□□□ 0.07
ATPAF1-201ENST00000329231 SMIM29Q86T20 159 aa15.48■□□□□ 0.07
ATPAF1-201ENST00000329231 CD164Q04900 197 aa15.45■□□□□ 0.06
ATPAF1-201ENST00000329231 MUC2Q02817 5179 aa15.44■□□□□ 0.06
ATPAF1-201ENST00000329231 Q6ZQY7 126 aa15.44■□□□□ 0.06
ATPAF1-201ENST00000329231 A0A0U1RQV1 116 aa15.43■□□□□ 0.06
ATPAF1-201ENST00000329231 SMIM6P0DI80 62 aa15.43■□□□□ 0.06
ATPAF1-201ENST00000329231 H0YGX0 51 aa15.42■□□□□ 0.06
ATPAF1-201ENST00000329231 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.41■□□□□ 0.06
ATPAF1-201ENST00000329231 SNCGO76070 127 aa15.36■□□□□ 0.05
ATPAF1-201ENST00000329231 MUC17Q685J3 4493 aa15.35■□□□□ 0.05
ATPAF1-201ENST00000329231 K7ERJ3 54 aa15.35■□□□□ 0.05
ATPAF1-201ENST00000329231 F8WEM9 126 aa15.34■□□□□ 0.05
ATPAF1-201ENST00000329231 PPDPFLQ8WWR9 84 aa15.33■□□□□ 0.04
ATPAF1-201ENST00000329231 FAM218AQ96MZ4 157 aa15.32■□□□□ 0.04
ATPAF1-201ENST00000329231 TRIAP1O43715 76 aa15.31■□□□□ 0.04
ATPAF1-201ENST00000329231 LOC105371267A0A1B0GV96 52 aa15.3■□□□□ 0.04
ATPAF1-201ENST00000329231 ASB16-AS1Q495Z4 193 aa15.3■□□□□ 0.04
ATPAF1-201ENST00000329231 Q5XG85 94 aa15.3■□□□□ 0.04
ATPAF1-201ENST00000329231 A0A0G2JQZ4 141 aa15.29■□□□□ 0.04
ATPAF1-201ENST00000329231 A0A1B0GX51 115 aa15.28■□□□□ 0.04
ATPAF1-201ENST00000329231 OCIAD2Q56VL3 154 aa15.28■□□□□ 0.04
ATPAF1-201ENST00000329231 SEC61BP60468 96 aaKnown RBP15.27■□□□□ 0.04
ATPAF1-201ENST00000329231 PSMB2P49721 201 aa15.26■□□□□ 0.03
ATPAF1-201ENST00000329231 XP32Q5T750 250 aa15.24■□□□□ 0.03
ATPAF1-201ENST00000329231 SNHG12Q9BXW3 62 aa15.24■□□□□ 0.03
ATPAF1-201ENST00000329231 IGLV8-61A0A075B6I0 122 aa15.23■□□□□ 0.03
ATPAF1-201ENST00000329231 Q6JHZ5 121 aa15.22■□□□□ 0.03
ATPAF1-201ENST00000329231 COX6CP09669 75 aa15.21■□□□□ 0.03
ATPAF1-201ENST00000329231 M0R143 59 aa15.2■□□□□ 0.02
ATPAF1-201ENST00000329231 CLEC2BQ92478 149 aa15.2■□□□□ 0.02
ATPAF1-201ENST00000329231 GHRHP01286 108 aa15.19■□□□□ 0.02
ATPAF1-201ENST00000329231 TCL1BO95988 128 aa15.18■□□□□ 0.02
ATPAF1-201ENST00000329231 C1orf195Q5TG92 126 aa15.18■□□□□ 0.02
ATPAF1-201ENST00000329231 TSTD3H0UI37 97 aa15.17■□□□□ 0.02
ATPAF1-201ENST00000329231 C9orf92A6NGG3 77 aa15.14■□□□□ 0.01
ATPAF1-201ENST00000329231 IGFL1Q6UW32 110 aa15.14■□□□□ 0.01
ATPAF1-201ENST00000329231 DNAL4O96015 105 aa15.12■□□□□ 0.01
ATPAF1-201ENST00000329231 NDUFV3P56181 108 aaKnown RBP15.11■□□□□ 0.01
ATPAF1-201ENST00000329231 H3BUT2 72 aa15.1■□□□□ 0.01
ATPAF1-201ENST00000329231 FABP2P12104 132 aa15.09■□□□□ 0.01
ATPAF1-201ENST00000329231 TRBV7-7A0A0K0K1E9 115 aa15.08■□□□□ 0
ATPAF1-201ENST00000329231 SCGB1C2P0DMR2 95 aa15.08■□□□□ 0
ATPAF1-201ENST00000329231 FAT4Q6V0I7 4981 aa15.07■□□□□ 0
ATPAF1-201ENST00000329231 ORMDL1Q9P0S3 153 aa15.07■□□□□ 0
ATPAF1-201ENST00000329231 H3BQ85 93 aa15.06■□□□□ 0
ATPAF1-201ENST00000329231 KRTAP4-1Q9BYQ7 146 aa15.04■□□□□ -0
ATPAF1-201ENST00000329231 H3BMG7 143 aa15.02■□□□□ -0
ATPAF1-201ENST00000329231 TRACP01848 142 aa15.02■□□□□ -0
ATPAF1-201ENST00000329231 LST1O00453 97 aa15.01□□□□□ -0.01
ATPAF1-201ENST00000329231 LCE2AQ5TA79 106 aaPredicted RBP15.01□□□□□ -0.01
ATPAF1-201ENST00000329231 TMEM256-PLSCR3K7ERE1 68 aa14.99□□□□□ -0.01
ATPAF1-201ENST00000329231 Q6Q795 121 aa14.96□□□□□ -0.01
ATPAF1-201ENST00000329231 PCOTHQ58A44 107 aa14.95□□□□□ -0.02
ATPAF1-201ENST00000329231 BATFQ16520 125 aa14.94□□□□□ -0.02
ATPAF1-201ENST00000329231 TEN1Q86WV5 123 aa14.93□□□□□ -0.02
ATPAF1-201ENST00000329231 NAA38Q9BRA0 125 aaKnown RBP14.93□□□□□ -0.02
ATPAF1-201ENST00000329231 UBE2V1Q13404 147 aa14.91□□□□□ -0.02
ATPAF1-201ENST00000329231 SS18L2Q9UHA2 77 aa14.89□□□□□ -0.03
ATPAF1-201ENST00000329231 ATXN8Q156A1 80 aa14.87□□□□□ -0.03
ATPAF1-201ENST00000329231 ANKRD29Q8N6D5 301 aa14.86□□□□□ -0.03
ATPAF1-201ENST00000329231 A0A1B0GV72 72 aa14.85□□□□□ -0.03
ATPAF1-201ENST00000329231 RPL37P61927 97 aaKnown RBP14.85□□□□□ -0.03
ATPAF1-201ENST00000329231 BAALC-AS2P0C853 105 aa14.83□□□□□ -0.04
ATPAF1-201ENST00000329231 LYRM7Q5U5X0 104 aa14.83□□□□□ -0.04
ATPAF1-201ENST00000329231 A0A1W2PNM2 257 aa14.82□□□□□ -0.04
ATPAF1-201ENST00000329231 A0A087WSZ3 146 aa14.8□□□□□ -0.04
ATPAF1-201ENST00000329231 TRBV7-4A0A0J9YYF1 115 aa14.76□□□□□ -0.05
ATPAF1-201ENST00000329231 TRBV20-1A0A075B6N2 111 aa14.75□□□□□ -0.05
ATPAF1-201ENST00000329231 C9orf118A6NHY6 69 aa14.75□□□□□ -0.05
ATPAF1-201ENST00000329231 RBM3P98179 157 aaKnown RBP14.75□□□□□ -0.05
ATPAF1-201ENST00000329231 OBSCN-AS1Q96MR7 158 aa14.75□□□□□ -0.05
ATPAF1-201ENST00000329231 TAX1BP3O14907 124 aa14.73□□□□□ -0.05
ATPAF1-201ENST00000329231 CCKP06307 115 aa14.72□□□□□ -0.05
ATPAF1-201ENST00000329231 DSCR8Q96T75 97 aa14.7□□□□□ -0.06
ATPAF1-201ENST00000329231 A0A1W2PPM0 123 aa14.66□□□□□ -0.06
ATPAF1-201ENST00000329231 Q96NJ1 140 aa14.66□□□□□ -0.06
ATPAF1-201ENST00000329231 Q75L30 129 aa14.65□□□□□ -0.06
ATPAF1-201ENST00000329231 C9JAW5 83 aa14.64□□□□□ -0.07
ATPAF1-201ENST00000329231 JMJD7-PLA2G4BH0Y9G9 81 aa14.64□□□□□ -0.07
ATPAF1-201ENST00000329231 LCE2CQ5TA81 110 aa14.64□□□□□ -0.07
ATPAF1-201ENST00000329231 KRTAP19-2Q3LHN2 52 aa14.63□□□□□ -0.07
ATPAF1-201ENST00000329231 VPS25Q9BRG1 176 aa14.63□□□□□ -0.07
ATPAF1-201ENST00000329231 ATP11AUNQ6ZP68 121 aa14.61□□□□□ -0.07
ATPAF1-201ENST00000329231 SIGMAR1Q99720 223 aa14.57□□□□□ -0.08
ATPAF1-201ENST00000329231 COL5A1-AS1Q5SY13 56 aa14.56□□□□□ -0.08
ATPAF1-201ENST00000329231 KRTAP9-2Q9BYQ4 174 aa14.55□□□□□ -0.08
ATPAF1-201ENST00000329231 LOC110117498A0A087WWA1 95 aa14.54□□□□□ -0.08
ATPAF1-201ENST00000329231 C21orf62-AS1Q17RA5 79 aa14.54□□□□□ -0.08
ATPAF1-201ENST00000329231 LINC00472Q9H8W2 130 aa14.53□□□□□ -0.08
ATPAF1-201ENST00000329231 H3BT86 120 aa14.52□□□□□ -0.09
ATPAF1-201ENST00000329231 IGKV4-1P06312 121 aa14.52□□□□□ -0.09
ATPAF1-201ENST00000329231 PDE6GP18545 87 aa14.52□□□□□ -0.09
ATPAF1-201ENST00000329231 Q6ZQT0 140 aa14.52□□□□□ -0.09
ATPAF1-201ENST00000329231 C20orf166-AS1Q96NR2 134 aa14.52□□□□□ -0.09
ATPAF1-201ENST00000329231 C14orf132Q9NPU4 83 aa14.49□□□□□ -0.09
ATPAF1-201ENST00000329231 SPCS1Q9Y6A9 102 aa14.49□□□□□ -0.09
ATPAF1-201ENST00000329231 A8MUU9 505 aa14.48□□□□□ -0.09
ATPAF1-201ENST00000329231 DSCR10P59022 87 aa14.48□□□□□ -0.09
ATPAF1-201ENST00000329231 MT1HP80294 61 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 127.7 ms