RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 TP53AIP1Q9HCN2 124 aa10.81□□□□□ -0.68
PACS1-201ENST00000320580 STAB1Q9NY15 2570 aa10.8□□□□□ -0.68
PACS1-201ENST00000320580 A8MWP4 228 aa10.8□□□□□ -0.68
PACS1-201ENST00000320580 Q75L30 129 aa10.8□□□□□ -0.68
PACS1-201ENST00000320580 A8MU10 97 aa10.79□□□□□ -0.68
PACS1-201ENST00000320580 TENM4Q6N022 2769 aa10.78□□□□□ -0.68
PACS1-201ENST00000320580 HIVEP1P15822 2718 aa10.77□□□□□ -0.68
PACS1-201ENST00000320580 FBN2P35556 2912 aa10.77□□□□□ -0.68
PACS1-201ENST00000320580 IGLV1-50A0A075B6I6 118 aa10.77□□□□□ -0.69
PACS1-201ENST00000320580 H3BS24 57 aa10.77□□□□□ -0.69
PACS1-201ENST00000320580 KRTAP1-1Q07627 177 aa10.77□□□□□ -0.69
PACS1-201ENST00000320580 C15orf56Q8N910 161 aa10.77□□□□□ -0.69
PACS1-201ENST00000320580 CELSR1Q9NYQ6 3014 aa10.76□□□□□ -0.69
PACS1-201ENST00000320580 OXLD1Q5BKU9 147 aa10.76□□□□□ -0.69
PACS1-201ENST00000320580 PRAC1Q96KF2 57 aa10.76□□□□□ -0.69
PACS1-201ENST00000320580 RETNLBQ9BQ08 111 aa10.75□□□□□ -0.69
PACS1-201ENST00000320580 SVEP1Q4LDE5 3571 aa10.74□□□□□ -0.69
PACS1-201ENST00000320580 ACYP2P14621 99 aa10.73□□□□□ -0.69
PACS1-201ENST00000320580 SPRR4Q96PI1 79 aa10.72□□□□□ -0.69
PACS1-201ENST00000320580 NOTCH1P46531 2555 aa10.72□□□□□ -0.69
PACS1-201ENST00000320580 LINC01556Q5JQF7 62 aa10.72□□□□□ -0.69
PACS1-201ENST00000320580 Q8NAQ8 132 aa10.72□□□□□ -0.69
PACS1-201ENST00000320580 MXRA5Q9NR99 2828 aa10.71□□□□□ -0.69
PACS1-201ENST00000320580 NIPBLQ6KC79 2804 aaeCLIP10.71□□□□□ -0.69
PACS1-201ENST00000320580 MOBPQ13875 183 aa10.68□□□□□ -0.7
PACS1-201ENST00000320580 ZCCHC13Q8WW36 166 aaKnown RBP10.68□□□□□ -0.7
PACS1-201ENST00000320580 C14orf177Q52M58 125 aa10.68□□□□□ -0.7
PACS1-201ENST00000320580 CSMD1Q96PZ7 3565 aa10.67□□□□□ -0.7
PACS1-201ENST00000320580 IGLV8-61A0A075B6I0 122 aa10.67□□□□□ -0.7
PACS1-201ENST00000320580 SPINK1P00995 79 aa10.67□□□□□ -0.7
PACS1-201ENST00000320580 PRR26Q8N8Z3 221 aa10.66□□□□□ -0.7
PACS1-201ENST00000320580 KMT2BQ9UMN6 2715 aaPredicted RBP10.65□□□□□ -0.71
PACS1-201ENST00000320580 NSD1Q96L73 2696 aaPredicted RBP10.64□□□□□ -0.71
PACS1-201ENST00000320580 IGLV7-46A0A075B6I9 117 aa10.64□□□□□ -0.71
PACS1-201ENST00000320580 SPINK7P58062 85 aa10.64□□□□□ -0.71
PACS1-201ENST00000320580 LINC00313P59037 77 aa10.64□□□□□ -0.71
PACS1-201ENST00000320580 LINC01554Q52M75 96 aa10.64□□□□□ -0.71
PACS1-201ENST00000320580 PHF5AQ7RTV0 110 aaKnown RBP10.63□□□□□ -0.71
PACS1-201ENST00000320580 KRTAP24-1Q3LI83 254 aa10.62□□□□□ -0.71
PACS1-201ENST00000320580 LINC01558Q9Y6Z2 57 aa10.62□□□□□ -0.71
PACS1-201ENST00000320580 K7ERS5 55 aa10.61□□□□□ -0.71
PACS1-201ENST00000320580 CSMD2Q7Z408 3487 aa10.6□□□□□ -0.71
PACS1-201ENST00000320580 UQCR11O14957 56 aa10.59□□□□□ -0.71
PACS1-201ENST00000320580 NBEAL1Q6ZS30 2694 aa10.58□□□□□ -0.72
PACS1-201ENST00000320580 KRTAP10-3P60369 221 aa10.58□□□□□ -0.72
PACS1-201ENST00000320580 MIR22HGQ0VDD5 57 aa10.58□□□□□ -0.72
PACS1-201ENST00000320580 C8orf17Q9NRJ1 99 aa10.58□□□□□ -0.72
PACS1-201ENST00000320580 ZNF706Q9Y5V0 76 aaPredicted RBP10.58□□□□□ -0.72
PACS1-201ENST00000320580 MRPL34Q9BQ48 92 aaKnown RBP10.57□□□□□ -0.72
PACS1-201ENST00000320580 CNBPP62633 177 aaKnown RBP10.56□□□□□ -0.72
PACS1-201ENST00000320580 CIRBP-AS1Q8TBR5 109 aa10.55□□□□□ -0.72
PACS1-201ENST00000320580 H3BNG1 76 aa10.55□□□□□ -0.72
PACS1-201ENST00000320580 A6NN06 94 aa10.54□□□□□ -0.72
PACS1-201ENST00000320580 PLA2G2DQ9UNK4 145 aa10.53□□□□□ -0.72
PACS1-201ENST00000320580 LCE6AA0A183 80 aa10.52□□□□□ -0.72
PACS1-201ENST00000320580 CHTF8P0CG12 524 aa10.52□□□□□ -0.73
PACS1-201ENST00000320580 IGKV2D-30A0A075B6S6 120 aa10.51□□□□□ -0.73
PACS1-201ENST00000320580 IGKV2-30P06310 120 aa10.51□□□□□ -0.73
PACS1-201ENST00000320580 NBPF19A0A087WUL8 3843 aa10.5□□□□□ -0.73
PACS1-201ENST00000320580 TLX1NBP0CAT3 122 aa10.5□□□□□ -0.73
PACS1-201ENST00000320580 HRES1P13985 223 aa10.48□□□□□ -0.73
PACS1-201ENST00000320580 CASC10Q5T4H9 136 aa10.48□□□□□ -0.73
PACS1-201ENST00000320580 TNP2Q05952 138 aa10.47□□□□□ -0.73
PACS1-201ENST00000320580 C9orf163Q8N9P6 203 aa10.46□□□□□ -0.74
PACS1-201ENST00000320580 A0A1B0GVX0 72 aa10.45□□□□□ -0.74
PACS1-201ENST00000320580 DNAH10OSP0CZ25 163 aa10.44□□□□□ -0.74
PACS1-201ENST00000320580 MMP24-AS1A0A0U1RRL7 71 aa10.43□□□□□ -0.74
PACS1-201ENST00000320580 OTOGQ6ZRI0 2925 aa10.42□□□□□ -0.74
PACS1-201ENST00000320580 SPRR1AP35321 89 aa10.42□□□□□ -0.74
PACS1-201ENST00000320580 IGLV5-37A0A075B6J1 123 aa10.42□□□□□ -0.74
PACS1-201ENST00000320580 PDZD2O15018 2839 aa10.41□□□□□ -0.74
PACS1-201ENST00000320580 KRTAP29-1A8MX34 341 aaPredicted RBP10.38□□□□□ -0.75
PACS1-201ENST00000320580 CSAG1Q6PB30 78 aa10.38□□□□□ -0.75
PACS1-201ENST00000320580 CUBNO60494 3623 aa10.36□□□□□ -0.75
PACS1-201ENST00000320580 LINC00472Q9H8W2 130 aa10.35□□□□□ -0.75
PACS1-201ENST00000320580 ADM2Q7Z4H4 148 aa10.34□□□□□ -0.75
PACS1-201ENST00000320580 ZFHX3Q15911 3703 aa10.31□□□□□ -0.76
PACS1-201ENST00000320580 FAM229AH3BQW9 127 aa10.31□□□□□ -0.76
PACS1-201ENST00000320580 KRTAP26-1Q6PEX3 210 aa10.3□□□□□ -0.76
PACS1-201ENST00000320580 KRTAP4-16G5E9R7 235 aaPredicted RBP10.29□□□□□ -0.76
PACS1-201ENST00000320580 KRTAP10-11P60412 298 aa10.29□□□□□ -0.76
PACS1-201ENST00000320580 SSBP3-AS1Q7Z2R9 100 aa10.29□□□□□ -0.76
PACS1-201ENST00000320580 VPS13CQ709C8 3753 aa10.29□□□□□ -0.76
PACS1-201ENST00000320580 C1orf134Q5TEV5 83 aa10.28□□□□□ -0.76
PACS1-201ENST00000320580 ANAPC11Q9NYG5 84 aa10.27□□□□□ -0.77
PACS1-201ENST00000320580 TENM1Q9UKZ4 2725 aa10.27□□□□□ -0.77
PACS1-201ENST00000320580 SPINT4Q6UDR6 99 aa10.26□□□□□ -0.77
PACS1-201ENST00000320580 RTL8CO15255 209 aa10.21□□□□□ -0.77
PACS1-201ENST00000320580 PLA2G1BP04054 148 aaKnown RBP10.19□□□□□ -0.78
PACS1-201ENST00000320580 K7EIL1 84 aa10.17□□□□□ -0.78
PACS1-201ENST00000320580 VWFP04275 2813 aa10.17□□□□□ -0.78
PACS1-201ENST00000320580 SPACA4Q8TDM5 124 aa10.15□□□□□ -0.78
PACS1-201ENST00000320580 Q6ZR54 194 aa10.13□□□□□ -0.79
PACS1-201ENST00000320580 SPRR1BP22528 89 aa10.1□□□□□ -0.79
PACS1-201ENST00000320580 FBN1P35555 2871 aaKnown RBP10.08□□□□□ -0.8
PACS1-201ENST00000320580 ASB16-AS1Q495Z4 193 aa10.08□□□□□ -0.8
PACS1-201ENST00000320580 Q8N1X5 172 aa10.06□□□□□ -0.8
PACS1-201ENST00000320580 FLG2Q5D862 2391 aaPredicted RBP10.06□□□□□ -0.8
PACS1-201ENST00000320580 SPATA8Q6RVD6 105 aa10.05□□□□□ -0.8
PACS1-201ENST00000320580 IGLV5-52A0A0A0MRZ9 124 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms