RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 A0A1W2PNM2 257 aa4.72□□□□□ -1.65
IFT88-201ENST00000319980 EPM2AB3EWF7 344 aa4.72□□□□□ -1.65
IFT88-201ENST00000319980 LY6G6CO95867 125 aa4.72□□□□□ -1.65
IFT88-201ENST00000319980 CXCL6P80162 114 aa4.72□□□□□ -1.65
IFT88-201ENST00000319980 SMIM29Q86T20 159 aa4.72□□□□□ -1.65
IFT88-201ENST00000319980 A0A0G2JQZ4 141 aa4.71□□□□□ -1.66
IFT88-201ENST00000319980 F8WEM9 126 aa4.71□□□□□ -1.66
IFT88-201ENST00000319980 UQCRQO14949 82 aa4.71□□□□□ -1.66
IFT88-201ENST00000319980 UBE2AP49459 152 aa4.71□□□□□ -1.66
IFT88-201ENST00000319980 LINC00336Q6ZUF6 198 aa4.71□□□□□ -1.66
IFT88-201ENST00000319980 RTL8CO15255 209 aa4.71□□□□□ -1.66
IFT88-201ENST00000319980 COX7CP15954 63 aa4.71□□□□□ -1.66
IFT88-201ENST00000319980 SPACA4Q8TDM5 124 aa4.71□□□□□ -1.66
IFT88-201ENST00000319980 VPS13DQ5THJ4 4388 aa4.7□□□□□ -1.66
IFT88-201ENST00000319980 C1orf134Q5TEV5 83 aa4.7□□□□□ -1.66
IFT88-201ENST00000319980 Q8NBF4 154 aa4.7□□□□□ -1.66
IFT88-201ENST00000319980 LINC00476Q8WZB0 136 aa4.7□□□□□ -1.66
IFT88-201ENST00000319980 C9orf153Q5TBE3 101 aa4.7□□□□□ -1.66
IFT88-201ENST00000319980 Q8N9L7 120 aa4.7□□□□□ -1.66
IFT88-201ENST00000319980 DNAH6Q9C0G6 4158 aa4.7□□□□□ -1.66
IFT88-201ENST00000319980 SERP2Q8N6R1 65 aa4.69□□□□□ -1.66
IFT88-201ENST00000319980 H0Y9J4 135 aa4.69□□□□□ -1.66
IFT88-201ENST00000319980 BPY2O14599 106 aa4.69□□□□□ -1.66
IFT88-201ENST00000319980 SS18L2Q9UHA2 77 aa4.69□□□□□ -1.66
IFT88-201ENST00000319980 BCE1O60756 84 aa4.68□□□□□ -1.66
IFT88-201ENST00000319980 A0A1B0GW54 56 aa4.68□□□□□ -1.66
IFT88-201ENST00000319980 IGFL1Q6UW32 110 aa4.68□□□□□ -1.66
IFT88-201ENST00000319980 SPRR4Q96PI1 79 aa4.68□□□□□ -1.66
IFT88-201ENST00000319980 IGLV5-52A0A0A0MRZ9 124 aa4.67□□□□□ -1.66
IFT88-201ENST00000319980 LCE6AA0A183 80 aa4.67□□□□□ -1.66
IFT88-201ENST00000319980 CRYGAP11844 174 aa4.67□□□□□ -1.66
IFT88-201ENST00000319980 RYR2Q92736 4967 aa4.67□□□□□ -1.66
IFT88-201ENST00000319980 KMT2CQ8NEZ4 4911 aaKnown RBP4.67□□□□□ -1.66
IFT88-201ENST00000319980 DNAH2Q9P225 4427 aa4.66□□□□□ -1.66
IFT88-201ENST00000319980 KRTAP13-1Q8IUC0 172 aa4.65□□□□□ -1.66
IFT88-201ENST00000319980 IGLV8-61A0A075B6I0 122 aa4.65□□□□□ -1.67
IFT88-201ENST00000319980 IGKV4-1P06312 121 aa4.65□□□□□ -1.67
IFT88-201ENST00000319980 RYR3Q15413 4870 aa4.65□□□□□ -1.67
IFT88-201ENST00000319980 A0A087WSZ3 146 aa4.64□□□□□ -1.67
IFT88-201ENST00000319980 SPRR1BP22528 89 aa4.64□□□□□ -1.67
IFT88-201ENST00000319980 CYSTM1Q9H1C7 97 aa4.64□□□□□ -1.67
IFT88-201ENST00000319980 PSORS1C2Q9UIG4 136 aa4.64□□□□□ -1.67
IFT88-201ENST00000319980 PLAC8Q9NZF1 115 aa4.64□□□□□ -1.67
IFT88-201ENST00000319980 OXTP01178 125 aa4.63□□□□□ -1.67
IFT88-201ENST00000319980 SEC61BP60468 96 aaKnown RBP4.63□□□□□ -1.67
IFT88-201ENST00000319980 DEFB116Q30KQ4 102 aa4.63□□□□□ -1.67
IFT88-201ENST00000319980 SACSQ9NZJ4 4579 aa4.62□□□□□ -1.67
IFT88-201ENST00000319980 TRAV7A0A075B6U4 112 aa4.62□□□□□ -1.67
IFT88-201ENST00000319980 C20orf197Q8N268 126 aa4.62□□□□□ -1.67
IFT88-201ENST00000319980 DSCR10P59022 87 aa4.61□□□□□ -1.67
IFT88-201ENST00000319980 HECTD4Q9Y4D8 3996 aa4.61□□□□□ -1.67
IFT88-201ENST00000319980 IGLV9-49A0A0B4J1Y8 123 aa4.61□□□□□ -1.67
IFT88-201ENST00000319980 KRTAP10-2P60368 255 aa4.61□□□□□ -1.67
IFT88-201ENST00000319980 SMIM20Q8N5G0 67 aa4.61□□□□□ -1.67
IFT88-201ENST00000319980 K7EQZ3 153 aa4.61□□□□□ -1.67
IFT88-201ENST00000319980 ZNF861PO60384 105 aa4.59□□□□□ -1.67
IFT88-201ENST00000319980 ANAPC11Q9NYG5 84 aa4.59□□□□□ -1.67
IFT88-201ENST00000319980 FRAS1Q86XX4 4008 aa4.58□□□□□ -1.68
IFT88-201ENST00000319980 CIRBP-AS1Q8TBR5 109 aa4.58□□□□□ -1.68
IFT88-201ENST00000319980 SNURFQ9Y675 71 aa4.58□□□□□ -1.68
IFT88-201ENST00000319980 ZNF706Q9Y5V0 76 aaPredicted RBP4.57□□□□□ -1.68
IFT88-201ENST00000319980 RPL37AP61513 92 aaKnown RBP4.57□□□□□ -1.68
IFT88-201ENST00000319980 LINC00483Q53H64 154 aa4.57□□□□□ -1.68
IFT88-201ENST00000319980 OCR1Q9BZK8 76 aa4.57□□□□□ -1.68
IFT88-201ENST00000319980 DNAH17Q9UFH2 4485 aa4.56□□□□□ -1.68
IFT88-201ENST00000319980 BIRC6Q9NR09 4857 aa4.56□□□□□ -1.68
IFT88-201ENST00000319980 HRCT1Q6UXD1 115 aa4.56□□□□□ -1.68
IFT88-201ENST00000319980 IGLV7-43P04211 117 aa4.56□□□□□ -1.68
IFT88-201ENST00000319980 TMEM258P61165 79 aa4.55□□□□□ -1.68
IFT88-201ENST00000319980 KLKP1Q107X0 134 aa4.55□□□□□ -1.68
IFT88-201ENST00000319980 MOBPQ13875 183 aa4.55□□□□□ -1.68
IFT88-201ENST00000319980 HCG22E2RYF7 251 aa4.55□□□□□ -1.68
IFT88-201ENST00000319980 LINC00472Q9H8W2 130 aa4.55□□□□□ -1.68
IFT88-201ENST00000319980 KRTAP10-1P60331 282 aa4.54□□□□□ -1.68
IFT88-201ENST00000319980 DNAH8Q96JB1 4490 aa4.54□□□□□ -1.68
IFT88-201ENST00000319980 TMEM254Q8TBM7 123 aa4.54□□□□□ -1.68
IFT88-201ENST00000319980 WFDC13Q8IUB5 93 aa4.54□□□□□ -1.68
IFT88-201ENST00000319980 H7BZZ5 65 aa4.53□□□□□ -1.68
IFT88-201ENST00000319980 HYDINQ4G0P3 5121 aa4.53□□□□□ -1.68
IFT88-201ENST00000319980 A8MWP4 228 aa4.52□□□□□ -1.69
IFT88-201ENST00000319980 PRR15Q8IV56 129 aa4.52□□□□□ -1.69
IFT88-201ENST00000319980 Q6ZSA8 131 aa4.52□□□□□ -1.69
IFT88-201ENST00000319980 C4orf26Q17RF5 130 aa4.51□□□□□ -1.69
IFT88-201ENST00000319980 DNAH11Q96DT5 4516 aa4.51□□□□□ -1.69
IFT88-201ENST00000319980 CD164Q04900 197 aa4.5□□□□□ -1.69
IFT88-201ENST00000319980 DNAH5Q8TE73 4624 aa4.5□□□□□ -1.69
IFT88-201ENST00000319980 CASC2Q6XLA1 102 aa4.49□□□□□ -1.69
IFT88-201ENST00000319980 Q96NJ1 140 aa4.49□□□□□ -1.69
IFT88-201ENST00000319980 FAT2Q9NYQ8 4349 aa4.49□□□□□ -1.69
IFT88-201ENST00000319980 A0A0U1RQV1 116 aa4.49□□□□□ -1.69
IFT88-201ENST00000319980 J3KT08 172 aa4.49□□□□□ -1.69
IFT88-201ENST00000319980 NDUFB1O75438 58 aa4.49□□□□□ -1.69
IFT88-201ENST00000319980 FAM236DA0A1B0GTK5 79 aa4.49□□□□□ -1.69
IFT88-201ENST00000319980 KRTAP29-1A8MX34 341 aaPredicted RBP4.49□□□□□ -1.69
IFT88-201ENST00000319980 NDUFC1O43677 76 aa4.49□□□□□ -1.69
IFT88-201ENST00000319980 FAM236CP0DP71 79 aa4.49□□□□□ -1.69
IFT88-201ENST00000319980 LRP1BQ9NZR2 4599 aa4.47□□□□□ -1.69
IFT88-201ENST00000319980 PKD1P98161 4303 aa4.47□□□□□ -1.69
IFT88-201ENST00000319980 EPPK1P58107 5090 aaKnown RBP4.47□□□□□ -1.69
IFT88-201ENST00000319980 CDK2AP2O75956 126 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms