RNA–Protein interactions for RNA: ENST00000312912.9

KDM3A-201, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-201ENST00000312912 SPINK7P58062 85 aa9.7□□□□□ -0.86
KDM3A-201ENST00000312912 TEX15Q9BXT5 2789 aa9.66□□□□□ -0.86
KDM3A-201ENST00000312912 A0A0C4DFX4 3053 aa9.66□□□□□ -0.86
KDM3A-201ENST00000312912 ASB16-AS1Q495Z4 193 aa9.65□□□□□ -0.86
KDM3A-201ENST00000312912 NOTCH1P46531 2555 aa9.65□□□□□ -0.86
KDM3A-201ENST00000312912 MGAQ8IWI9 3026 aa9.64□□□□□ -0.87
KDM3A-201ENST00000312912 LUZP6Q538Z0 58 aa9.64□□□□□ -0.87
KDM3A-201ENST00000312912 TRANK1O15050 2925 aa9.64□□□□□ -0.87
KDM3A-201ENST00000312912 NBEAL1Q6ZS30 2694 aa9.63□□□□□ -0.87
KDM3A-201ENST00000312912 DMAC1Q96GE9 116 aa9.62□□□□□ -0.87
KDM3A-201ENST00000312912 UNC79Q9P2D8 2635 aa9.62□□□□□ -0.87
KDM3A-201ENST00000312912 C9orf92A6NGG3 77 aa9.61□□□□□ -0.87
KDM3A-201ENST00000312912 COL6A5A8TX70 2615 aa9.61□□□□□ -0.87
KDM3A-201ENST00000312912 SPRR1AP35321 89 aa9.59□□□□□ -0.87
KDM3A-201ENST00000312912 PRUNE2Q8WUY3 3088 aa9.58□□□□□ -0.88
KDM3A-201ENST00000312912 GCN1Q92616 2671 aaKnown RBP9.58□□□□□ -0.88
KDM3A-201ENST00000312912 SMR3BP02814 79 aaPredicted RBP9.57□□□□□ -0.88
KDM3A-201ENST00000312912 HRES1P13985 223 aa9.57□□□□□ -0.88
KDM3A-201ENST00000312912 Q8NDZ9 215 aa9.57□□□□□ -0.88
KDM3A-201ENST00000312912 A0A0A0MQY5 61 aa9.55□□□□□ -0.88
KDM3A-201ENST00000312912 A6NN06 94 aa9.55□□□□□ -0.88
KDM3A-201ENST00000312912 UNC80Q8N2C7 3258 aa9.54□□□□□ -0.88
KDM3A-201ENST00000312912 MAP1AP78559 2803 aaPredicted RBP9.53□□□□□ -0.88
KDM3A-201ENST00000312912 Q8N1X5 172 aa9.53□□□□□ -0.88
KDM3A-201ENST00000312912 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.51□□□□□ -0.89
KDM3A-201ENST00000312912 A0A1B0GU33 70 aa9.51□□□□□ -0.89
KDM3A-201ENST00000312912 FLG2Q5D862 2391 aaPredicted RBP9.5□□□□□ -0.89
KDM3A-201ENST00000312912 IGSF10Q6WRI0 2623 aa9.49□□□□□ -0.89
KDM3A-201ENST00000312912 MMP24-AS1A0A0U1RRL7 71 aa9.48□□□□□ -0.89
KDM3A-201ENST00000312912 SPRR1BP22528 89 aa9.48□□□□□ -0.89
KDM3A-201ENST00000312912 TNP2Q05952 138 aa9.48□□□□□ -0.89
KDM3A-201ENST00000312912 COX6B2Q6YFQ2 88 aa9.48□□□□□ -0.89
KDM3A-201ENST00000312912 A0A0D9SG42 100 aa9.47□□□□□ -0.89
KDM3A-201ENST00000312912 WDFY4Q6ZS81 3184 aa9.45□□□□□ -0.9
KDM3A-201ENST00000312912 KRTAP16-1A8MUX0 517 aa9.44□□□□□ -0.9
KDM3A-201ENST00000312912 TRIOO75962 3097 aa9.44□□□□□ -0.9
KDM3A-201ENST00000312912 CDH23Q9H251 3354 aa9.43□□□□□ -0.9
KDM3A-201ENST00000312912 UBR5O95071 2799 aaPredicted RBP9.43□□□□□ -0.9
KDM3A-201ENST00000312912 LINC00472Q9H8W2 130 aa9.43□□□□□ -0.9
KDM3A-201ENST00000312912 ZCCHC13Q8WW36 166 aaKnown RBP9.42□□□□□ -0.9
KDM3A-201ENST00000312912 PLAC8Q9NZF1 115 aa9.42□□□□□ -0.9
KDM3A-201ENST00000312912 NBEAL2Q6ZNJ1 2754 aa9.41□□□□□ -0.9
KDM3A-201ENST00000312912 KRTAP26-1Q6PEX3 210 aa9.39□□□□□ -0.91
KDM3A-201ENST00000312912 DSPP15924 2871 aaKnown RBP9.39□□□□□ -0.91
KDM3A-201ENST00000312912 XIRP2A4UGR9 3374 aa9.33□□□□□ -0.92
KDM3A-201ENST00000312912 STAB2Q8WWQ8 2551 aa9.31□□□□□ -0.92
KDM3A-201ENST00000312912 KRTAP21-3Q3LHN1 58 aa9.31□□□□□ -0.92
KDM3A-201ENST00000312912 LCE6AA0A183 80 aa9.3□□□□□ -0.92
KDM3A-201ENST00000312912 SPATA8Q6RVD6 105 aa9.29□□□□□ -0.92
KDM3A-201ENST00000312912 KRTAP1-5Q9BYS1 174 aa9.28□□□□□ -0.92
KDM3A-201ENST00000312912 DMBT1Q9UGM3 2413 aaPredicted RBP9.28□□□□□ -0.92
KDM3A-201ENST00000312912 Q5W150 140 aa9.27□□□□□ -0.93
KDM3A-201ENST00000312912 NSD1Q96L73 2696 aaPredicted RBP9.27□□□□□ -0.93
KDM3A-201ENST00000312912 A8MU10 97 aa9.27□□□□□ -0.93
KDM3A-201ENST00000312912 FRYQ5TBA9 3013 aa9.27□□□□□ -0.93
KDM3A-201ENST00000312912 SZT2Q5T011 3432 aa9.25□□□□□ -0.93
KDM3A-201ENST00000312912 ROMO1P60602 79 aa9.25□□□□□ -0.93
KDM3A-201ENST00000312912 Q6ZSA8 131 aa9.24□□□□□ -0.93
KDM3A-201ENST00000312912 VPS13AQ96RL7 3174 aa9.24□□□□□ -0.93
KDM3A-201ENST00000312912 ADM2Q7Z4H4 148 aa9.23□□□□□ -0.93
KDM3A-201ENST00000312912 KRTAP4-16G5E9R7 235 aaPredicted RBP9.22□□□□□ -0.93
KDM3A-201ENST00000312912 KRTAP25-1Q3LHN0 102 aa9.21□□□□□ -0.93
KDM3A-201ENST00000312912 KRTAP29-1A8MX34 341 aaPredicted RBP9.2□□□□□ -0.94
KDM3A-201ENST00000312912 Q6ZR54 194 aa9.17□□□□□ -0.94
KDM3A-201ENST00000312912 A0A087X002 238 aa9.16□□□□□ -0.94
KDM3A-201ENST00000312912 ITPR1Q14643 2758 aa9.14□□□□□ -0.95
KDM3A-201ENST00000312912 LINC00483Q53H64 154 aa9.14□□□□□ -0.95
KDM3A-201ENST00000312912 RPL37P61927 97 aaKnown RBP9.13□□□□□ -0.95
KDM3A-201ENST00000312912 FLNCQ14315 2725 aa9.11□□□□□ -0.95
KDM3A-201ENST00000312912 LAMA1P25391 3075 aa9.1□□□□□ -0.95
KDM3A-201ENST00000312912 CAMK2N1Q7Z7J9 78 aa9.09□□□□□ -0.95
KDM3A-201ENST00000312912 NDUFAF8A1L188 74 aa9.09□□□□□ -0.95
KDM3A-201ENST00000312912 H1FX-AS1Q4G0G2 97 aa9.07□□□□□ -0.96
KDM3A-201ENST00000312912 ITPR2Q14571 2701 aa9.06□□□□□ -0.96
KDM3A-201ENST00000312912 TACC2O95359 2948 aa9.05□□□□□ -0.96
KDM3A-201ENST00000312912 VCANP13611 3396 aa9.05□□□□□ -0.96
KDM3A-201ENST00000312912 FREM2Q5SZK8 3169 aa9.05□□□□□ -0.96
KDM3A-201ENST00000312912 S4R3F8 94 aa9.04□□□□□ -0.96
KDM3A-201ENST00000312912 KALRNO60229 2985 aa9.04□□□□□ -0.96
KDM3A-201ENST00000312912 PANO1I0J062 215 aa9.02□□□□□ -0.96
KDM3A-201ENST00000312912 NBEAQ8NFP9 2946 aa9.02□□□□□ -0.97
KDM3A-201ENST00000312912 KRTAP10-1P60331 282 aa9.02□□□□□ -0.97
KDM3A-201ENST00000312912 Q5VSD8 79 aa9□□□□□ -0.97
KDM3A-201ENST00000312912 DNAH14Q0VDD8 3507 aa8.99□□□□□ -0.97
KDM3A-201ENST00000312912 KRTAP10-2P60368 255 aa8.99□□□□□ -0.97
KDM3A-201ENST00000312912 DMXL2Q8TDJ6 3036 aa8.99□□□□□ -0.97
KDM3A-201ENST00000312912 COL6A3P12111 3177 aa8.98□□□□□ -0.97
KDM3A-201ENST00000312912 ATMQ13315 3056 aa8.95□□□□□ -0.98
KDM3A-201ENST00000312912 HIVEP1P15822 2718 aa8.94□□□□□ -0.98
KDM3A-201ENST00000312912 R4GN34 69 aa8.93□□□□□ -0.98
KDM3A-201ENST00000312912 CELSR3Q9NYQ7 3312 aa8.92□□□□□ -0.98
KDM3A-201ENST00000312912 ASH1LQ9NR48 2969 aaKnown RBP8.92□□□□□ -0.98
KDM3A-201ENST00000312912 NIPBLQ6KC79 2804 aaeCLIP8.92□□□□□ -0.983e-6■■■□□ 15.5
KDM3A-201ENST00000312912 UTP20O75691 2785 aaKnown RBP8.9□□□□□ -0.98
KDM3A-201ENST00000312912 TENM4Q6N022 2769 aa8.89□□□□□ -0.99
KDM3A-201ENST00000312912 EYSQ5T1H1 3165 aa8.89□□□□□ -0.99
KDM3A-201ENST00000312912 SEC61BP60468 96 aaKnown RBP8.89□□□□□ -0.99
KDM3A-201ENST00000312912 ADGRG4Q8IZF6 3080 aa8.89□□□□□ -0.99
KDM3A-201ENST00000312912 COL12A1Q99715 3063 aa8.89□□□□□ -0.99
KDM3A-201ENST00000312912 NOTCH2NLQ7Z3S9 236 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms