RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 A0A1B0GX51 115 aa12.71□□□□□ -0.38
SNUPN-201ENST00000308588 COX6CP09669 75 aa12.7□□□□□ -0.38
SNUPN-201ENST00000308588 SPINK1P00995 79 aa12.69□□□□□ -0.38
SNUPN-201ENST00000308588 PPDPFLQ8WWR9 84 aa12.67□□□□□ -0.38
SNUPN-201ENST00000308588 OCIAD2Q56VL3 154 aa12.66□□□□□ -0.38
SNUPN-201ENST00000308588 BATFQ16520 125 aa12.63□□□□□ -0.39
SNUPN-201ENST00000308588 RETNLBQ9BQ08 111 aa12.63□□□□□ -0.39
SNUPN-201ENST00000308588 SCGB1C2P0DMR2 95 aa12.62□□□□□ -0.39
SNUPN-201ENST00000308588 RPS29P62273 56 aaKnown RBP12.62□□□□□ -0.39
SNUPN-201ENST00000308588 F8WEM9 126 aa12.62□□□□□ -0.39
SNUPN-201ENST00000308588 PRR4Q16378 134 aa12.62□□□□□ -0.39
SNUPN-201ENST00000308588 SNHG12Q9BXW3 62 aa12.62□□□□□ -0.39
SNUPN-201ENST00000308588 A0A0G2JQZ4 141 aa12.61□□□□□ -0.39
SNUPN-201ENST00000308588 NAA38Q9BRA0 125 aaKnown RBP12.6□□□□□ -0.39
SNUPN-201ENST00000308588 IGLV8-61A0A075B6I0 122 aa12.59□□□□□ -0.39
SNUPN-201ENST00000308588 HRCT1Q6UXD1 115 aa12.59□□□□□ -0.39
SNUPN-201ENST00000308588 DNAL4O96015 105 aa12.57□□□□□ -0.4
SNUPN-201ENST00000308588 CD164Q04900 197 aa12.57□□□□□ -0.4
SNUPN-201ENST00000308588 LST1O00453 97 aa12.57□□□□□ -0.4
SNUPN-201ENST00000308588 GHRHP01286 108 aa12.57□□□□□ -0.4
SNUPN-201ENST00000308588 TRACP01848 142 aa12.55□□□□□ -0.4
SNUPN-201ENST00000308588 NDUFV3P56181 108 aaKnown RBP12.55□□□□□ -0.4
SNUPN-201ENST00000308588 LRP2P98164 4655 aa12.55□□□□□ -0.4
SNUPN-201ENST00000308588 LPAP08519 4548 aa12.54□□□□□ -0.4
SNUPN-201ENST00000308588 FABP2P12104 132 aa12.54□□□□□ -0.4
SNUPN-201ENST00000308588 Q6JHZ5 121 aa12.54□□□□□ -0.4
SNUPN-201ENST00000308588 ORMDL1Q9P0S3 153 aa12.54□□□□□ -0.4
SNUPN-201ENST00000308588 H3BUT2 72 aa12.52□□□□□ -0.4
SNUPN-201ENST00000308588 IGFL1Q6UW32 110 aa12.52□□□□□ -0.4
SNUPN-201ENST00000308588 H3BQ85 93 aa12.49□□□□□ -0.41
SNUPN-201ENST00000308588 TCL1BO95988 128 aa12.49□□□□□ -0.41
SNUPN-201ENST00000308588 TMEM256-PLSCR3K7ERE1 68 aa12.48□□□□□ -0.41
SNUPN-201ENST00000308588 TAX1BP3O14907 124 aa12.48□□□□□ -0.41
SNUPN-201ENST00000308588 LIMD2Q9BT23 127 aa12.48□□□□□ -0.41
SNUPN-201ENST00000308588 IGLV7-46A0A075B6I9 117 aa12.47□□□□□ -0.41
SNUPN-201ENST00000308588 PCP4L1A6NKN8 68 aa12.47□□□□□ -0.41
SNUPN-201ENST00000308588 H3BMG7 143 aa12.47□□□□□ -0.41
SNUPN-201ENST00000308588 FP248Q71RG6 208 aaPredicted RBP12.47□□□□□ -0.41
SNUPN-201ENST00000308588 C9orf118A6NHY6 69 aa12.46□□□□□ -0.42
SNUPN-201ENST00000308588 ATXN8Q156A1 80 aa12.46□□□□□ -0.42
SNUPN-201ENST00000308588 Q5XG85 94 aa12.45□□□□□ -0.42
SNUPN-201ENST00000308588 LYRM7Q5U5X0 104 aa12.43□□□□□ -0.42
SNUPN-201ENST00000308588 UBE2V1Q13404 147 aa12.42□□□□□ -0.42
SNUPN-201ENST00000308588 UBR4Q5T4S7 5183 aa12.41□□□□□ -0.42
SNUPN-201ENST00000308588 TRBV7-7A0A0K0K1E9 115 aa12.4□□□□□ -0.42
SNUPN-201ENST00000308588 BAALC-AS2P0C853 105 aa12.4□□□□□ -0.42
SNUPN-201ENST00000308588 TRBV20-1A0A075B6N2 111 aa12.39□□□□□ -0.43
SNUPN-201ENST00000308588 TPRXLQ17RH7 258 aa12.39□□□□□ -0.43
SNUPN-201ENST00000308588 A0A1W2PPM0 123 aa12.37□□□□□ -0.43
SNUPN-201ENST00000308588 A0A1B0GV72 72 aa12.37□□□□□ -0.43
SNUPN-201ENST00000308588 Q6Q795 121 aa12.37□□□□□ -0.43
SNUPN-201ENST00000308588 COL5A1-AS1Q5SY13 56 aa12.35□□□□□ -0.43
SNUPN-201ENST00000308588 TEN1Q86WV5 123 aa12.35□□□□□ -0.43
SNUPN-201ENST00000308588 ANKRD29Q8N6D5 301 aa12.35□□□□□ -0.43
SNUPN-201ENST00000308588 C1orf195Q5TG92 126 aa12.34□□□□□ -0.43
SNUPN-201ENST00000308588 KRTAP13-3Q3SY46 172 aa12.32□□□□□ -0.44
SNUPN-201ENST00000308588 A0A1W2PNM2 257 aa12.32□□□□□ -0.44
SNUPN-201ENST00000308588 ASB16-AS1Q495Z4 193 aa12.31□□□□□ -0.44
SNUPN-201ENST00000308588 C9JAW5 83 aa12.29□□□□□ -0.44
SNUPN-201ENST00000308588 RBM3P98179 157 aaKnown RBP12.28□□□□□ -0.44
SNUPN-201ENST00000308588 CDIP1Q9H305 208 aa12.28□□□□□ -0.44
SNUPN-201ENST00000308588 TRBV7-4A0A0J9YYF1 115 aa12.27□□□□□ -0.44
SNUPN-201ENST00000308588 A0A087WSZ3 146 aa12.25□□□□□ -0.45
SNUPN-201ENST00000308588 DSCR8Q96T75 97 aa12.23□□□□□ -0.45
SNUPN-201ENST00000308588 SPCS1Q9Y6A9 102 aa12.23□□□□□ -0.45
SNUPN-201ENST00000308588 CCKP06307 115 aa12.22□□□□□ -0.45
SNUPN-201ENST00000308588 SS18L2Q9UHA2 77 aa12.22□□□□□ -0.45
SNUPN-201ENST00000308588 JMJD7-PLA2G4BH0Y9G9 81 aa12.2□□□□□ -0.46
SNUPN-201ENST00000308588 MTURNQ8N3F0 131 aa12.2□□□□□ -0.46
SNUPN-201ENST00000308588 H3BT86 120 aa12.18□□□□□ -0.46
SNUPN-201ENST00000308588 OBSCN-AS1Q96MR7 158 aa12.16□□□□□ -0.46
SNUPN-201ENST00000308588 VPS25Q9BRG1 176 aa12.16□□□□□ -0.46
SNUPN-201ENST00000308588 C9orf92A6NGG3 77 aa12.14□□□□□ -0.47
SNUPN-201ENST00000308588 Q96NJ1 140 aa12.14□□□□□ -0.47
SNUPN-201ENST00000308588 LOC110117498A0A087WWA1 95 aa12.13□□□□□ -0.47
SNUPN-201ENST00000308588 Q6ZQT0 140 aa12.13□□□□□ -0.47
SNUPN-201ENST00000308588 K7EP34 96 aa12.12□□□□□ -0.47
SNUPN-201ENST00000308588 XP32Q5T750 250 aa12.11□□□□□ -0.47
SNUPN-201ENST00000308588 C14orf132Q9NPU4 83 aa12.11□□□□□ -0.47
SNUPN-201ENST00000308588 RNF213Q63HN8 5207 aa12.11□□□□□ -0.47
SNUPN-201ENST00000308588 MUC17Q685J3 4493 aa12.1□□□□□ -0.47
SNUPN-201ENST00000308588 PDE6GP18545 87 aa12.09□□□□□ -0.47
SNUPN-201ENST00000308588 SMCPP49901 116 aaPredicted RBP12.09□□□□□ -0.47
SNUPN-201ENST00000308588 PRO0461Q9UI25 63 aa12.06□□□□□ -0.48
SNUPN-201ENST00000308588 LINC00472Q9H8W2 130 aa12.05□□□□□ -0.48
SNUPN-201ENST00000308588 GTF2H5Q6ZYL4 71 aa12.02□□□□□ -0.48
SNUPN-201ENST00000308588 A0A1B0GW54 56 aa12.01□□□□□ -0.49
SNUPN-201ENST00000308588 C21orf62-AS1Q17RA5 79 aa12.01□□□□□ -0.49
SNUPN-201ENST00000308588 DEFB116Q30KQ4 102 aa12□□□□□ -0.49
SNUPN-201ENST00000308588 IGKV4-1P06312 121 aa11.99□□□□□ -0.49
SNUPN-201ENST00000308588 SIGMAR1Q99720 223 aa11.98□□□□□ -0.49
SNUPN-201ENST00000308588 MUC2Q02817 5179 aa11.97□□□□□ -0.49
SNUPN-201ENST00000308588 SEC61BP60468 96 aaKnown RBP11.96□□□□□ -0.49
SNUPN-201ENST00000308588 F8W1H4 67 aa11.91□□□□□ -0.5
SNUPN-201ENST00000308588 RPL37P61927 97 aaKnown RBP11.9□□□□□ -0.5
SNUPN-201ENST00000308588 DSCR10P59022 87 aa11.87□□□□□ -0.51
SNUPN-201ENST00000308588 A0A1B0GV90 55 aa11.86□□□□□ -0.51
SNUPN-201ENST00000308588 J3KT08 172 aa11.86□□□□□ -0.51
SNUPN-201ENST00000308588 PCOTHQ58A44 107 aa11.86□□□□□ -0.51
SNUPN-201ENST00000308588 NREPQ16612 68 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms