RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 LINC00612Q8N6U2 182 aa8.49□□□□□ -1.05
TRIM56-201ENST00000306085 ROMO1P60602 79 aa8.49□□□□□ -1.05
TRIM56-201ENST00000306085 KRTAP16-1A8MUX0 517 aa8.49□□□□□ -1.05
TRIM56-201ENST00000306085 Q5VV11 94 aa8.48□□□□□ -1.05
TRIM56-201ENST00000306085 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.48□□□□□ -1.05
TRIM56-201ENST00000306085 IGSF10Q6WRI0 2623 aa8.47□□□□□ -1.05
TRIM56-201ENST00000306085 CASC10Q5T4H9 136 aa8.47□□□□□ -1.05
TRIM56-201ENST00000306085 C19orf73Q9NVV2 129 aa8.46□□□□□ -1.06
TRIM56-201ENST00000306085 ZNF292O60281 2723 aa8.46□□□□□ -1.06
TRIM56-201ENST00000306085 GIG44P09565 113 aaPredicted RBP8.46□□□□□ -1.06
TRIM56-201ENST00000306085 CNBPP62633 177 aaKnown RBP8.43□□□□□ -1.06
TRIM56-201ENST00000306085 ZCCHC13Q8WW36 166 aaKnown RBP8.42□□□□□ -1.06
TRIM56-201ENST00000306085 CYSTM1Q9H1C7 97 aa8.4□□□□□ -1.06
TRIM56-201ENST00000306085 ITPR1Q14643 2758 aa8.4□□□□□ -1.06
TRIM56-201ENST00000306085 CEP350Q5VT06 3117 aa8.4□□□□□ -1.07
TRIM56-201ENST00000306085 M0QZ58 72 aa8.38□□□□□ -1.07
TRIM56-201ENST00000306085 SETXQ7Z333 2677 aaKnown RBP8.38□□□□□ -1.07
TRIM56-201ENST00000306085 RPL37P61927 97 aaKnown RBP8.38□□□□□ -1.07
TRIM56-201ENST00000306085 APCP25054 2843 aa8.36□□□□□ -1.07
TRIM56-201ENST00000306085 Q5W150 140 aa8.34□□□□□ -1.07
TRIM56-201ENST00000306085 NBEAL2Q6ZNJ1 2754 aa8.31□□□□□ -1.08
TRIM56-201ENST00000306085 MMP24-AS1A0A0U1RRL7 71 aa8.29□□□□□ -1.08
TRIM56-201ENST00000306085 C20orf166-AS1Q96NR2 134 aa8.28□□□□□ -1.08
TRIM56-201ENST00000306085 OXTP01178 125 aa8.27□□□□□ -1.09
TRIM56-201ENST00000306085 TNP2Q05952 138 aa8.25□□□□□ -1.09
TRIM56-201ENST00000306085 SPATA8Q6RVD6 105 aa8.25□□□□□ -1.09
TRIM56-201ENST00000306085 ADM2Q7Z4H4 148 aa8.25□□□□□ -1.09
TRIM56-201ENST00000306085 ASB16-AS1Q495Z4 193 aa8.24□□□□□ -1.09
TRIM56-201ENST00000306085 UBR5O95071 2799 aaPredicted RBP8.22□□□□□ -1.09
TRIM56-201ENST00000306085 Q8NDZ9 215 aa8.21□□□□□ -1.1
TRIM56-201ENST00000306085 KMT2BQ9UMN6 2715 aaPredicted RBP8.21□□□□□ -1.1
TRIM56-201ENST00000306085 KRTAP10-3P60369 221 aa8.2□□□□□ -1.1
TRIM56-201ENST00000306085 KLK9Q2XQG4 91 aa8.2□□□□□ -1.1
TRIM56-201ENST00000306085 SEC61BP60468 96 aaKnown RBP8.18□□□□□ -1.1
TRIM56-201ENST00000306085 NDUFAF8A1L188 74 aa8.15□□□□□ -1.1
TRIM56-201ENST00000306085 LRBAP50851 2863 aa8.15□□□□□ -1.1
TRIM56-201ENST00000306085 TRANK1O15050 2925 aa8.15□□□□□ -1.1
TRIM56-201ENST00000306085 A0A096LNT2 108 aa8.13□□□□□ -1.11
TRIM56-201ENST00000306085 Q5VSD8 79 aa8.13□□□□□ -1.11
TRIM56-201ENST00000306085 C10orf142B7Z368 130 aa8.11□□□□□ -1.11
TRIM56-201ENST00000306085 PCNTO95613 3336 aa8.09□□□□□ -1.11
TRIM56-201ENST00000306085 LINC00472Q9H8W2 130 aa8.08□□□□□ -1.12
TRIM56-201ENST00000306085 CFAP54Q96N23 3096 aa8.07□□□□□ -1.12
TRIM56-201ENST00000306085 A6NN06 94 aa8.05□□□□□ -1.12
TRIM56-201ENST00000306085 KRTAP25-1Q3LHN0 102 aa8.05□□□□□ -1.12
TRIM56-201ENST00000306085 C5orf42Q9H799 3197 aa8.04□□□□□ -1.12
TRIM56-201ENST00000306085 PLAC8Q9NZF1 115 aa8.03□□□□□ -1.12
TRIM56-201ENST00000306085 PANO1I0J062 215 aa8.03□□□□□ -1.12
TRIM56-201ENST00000306085 C10orf95Q9H7T3 257 aa8.02□□□□□ -1.13
TRIM56-201ENST00000306085 DSPP15924 2871 aaKnown RBP7.99□□□□□ -1.13
TRIM56-201ENST00000306085 KRTAP26-1Q6PEX3 210 aa7.97□□□□□ -1.13
TRIM56-201ENST00000306085 DNAH12Q6ZR08 3092 aa7.97□□□□□ -1.13
TRIM56-201ENST00000306085 GOLGB1Q14789 3259 aaKnown RBP7.97□□□□□ -1.13
TRIM56-201ENST00000306085 CHD9Q3L8U1 2897 aa7.96□□□□□ -1.14
TRIM56-201ENST00000306085 EP400Q96L91 3159 aa7.96□□□□□ -1.14
TRIM56-201ENST00000306085 Q6ZR54 194 aa7.94□□□□□ -1.14
TRIM56-201ENST00000306085 A8MU10 97 aa7.93□□□□□ -1.14
TRIM56-201ENST00000306085 SPRR1AP35321 89 aa7.9□□□□□ -1.14
TRIM56-201ENST00000306085 A0A0C4DFX4 3053 aa7.9□□□□□ -1.14
TRIM56-201ENST00000306085 A8MUU9 505 aa7.89□□□□□ -1.15
TRIM56-201ENST00000306085 LAMA2P24043 3122 aaKnown RBP7.87□□□□□ -1.15
TRIM56-201ENST00000306085 SPRR1BP22528 89 aa7.83□□□□□ -1.16
TRIM56-201ENST00000306085 TENM3Q9P273 2699 aa7.82□□□□□ -1.16
TRIM56-201ENST00000306085 HIVEP1P15822 2718 aa7.81□□□□□ -1.16
TRIM56-201ENST00000306085 CELSR2Q9HCU4 2923 aa7.8□□□□□ -1.16
TRIM56-201ENST00000306085 TNP1P09430 55 aa7.77□□□□□ -1.17
TRIM56-201ENST00000306085 KRTAP10-1P60331 282 aa7.77□□□□□ -1.17
TRIM56-201ENST00000306085 UTRNP46939 3433 aa7.73□□□□□ -1.17
TRIM56-201ENST00000306085 NF1P21359 2839 aa7.73□□□□□ -1.17
TRIM56-201ENST00000306085 KRTAP10-2P60368 255 aa7.73□□□□□ -1.17
TRIM56-201ENST00000306085 KALRNO60229 2985 aa7.73□□□□□ -1.17
TRIM56-201ENST00000306085 KRTAP1-5Q9BYS1 174 aa7.72□□□□□ -1.17
TRIM56-201ENST00000306085 KRTAP1-3Q8IUG1 177 aa7.72□□□□□ -1.17
TRIM56-201ENST00000306085 KRTAP1-1Q07627 177 aa7.69□□□□□ -1.18
TRIM56-201ENST00000306085 FREM2Q5SZK8 3169 aa7.69□□□□□ -1.18
TRIM56-201ENST00000306085 TENM1Q9UKZ4 2725 aa7.68□□□□□ -1.18
TRIM56-201ENST00000306085 FLNCQ14315 2725 aa7.68□□□□□ -1.18
TRIM56-201ENST00000306085 A0A087X002 238 aa7.68□□□□□ -1.18
TRIM56-201ENST00000306085 NOTCH2NLQ7Z3S9 236 aa7.68□□□□□ -1.18
TRIM56-201ENST00000306085 SRRM2Q9UQ35 2752 aaKnown RBP7.67□□□□□ -1.18
TRIM56-201ENST00000306085 KRTAP29-1A8MX34 341 aaPredicted RBP7.67□□□□□ -1.18
TRIM56-201ENST00000306085 PDZD2O15018 2839 aa7.63□□□□□ -1.19
TRIM56-201ENST00000306085 FRYQ5TBA9 3013 aa7.62□□□□□ -1.19
TRIM56-201ENST00000306085 TRIOO75962 3097 aa7.62□□□□□ -1.19
TRIM56-201ENST00000306085 ASH1LQ9NR48 2969 aaKnown RBP7.61□□□□□ -1.19
TRIM56-201ENST00000306085 MGAQ8IWI9 3026 aa7.6□□□□□ -1.19
TRIM56-201ENST00000306085 NIPBLQ6KC79 2804 aaeCLIP7.6□□□□□ -1.196e-6■■■□□ 16.7
TRIM56-201ENST00000306085 TGP01266 2768 aa7.6□□□□□ -1.19
TRIM56-201ENST00000306085 CHD7Q9P2D1 2997 aa7.58□□□□□ -1.2
TRIM56-201ENST00000306085 KRTAP4-16G5E9R7 235 aaPredicted RBP7.58□□□□□ -1.2
TRIM56-201ENST00000306085 KRTAP11-1Q8IUC1 163 aa7.58□□□□□ -1.2
TRIM56-201ENST00000306085 CRYBG3Q68DQ2 2970 aa7.57□□□□□ -1.2
TRIM56-201ENST00000306085 LCE6AA0A183 80 aa7.56□□□□□ -1.2
TRIM56-201ENST00000306085 P0C880 135 aa7.56□□□□□ -1.2
TRIM56-201ENST00000306085 KRTAP10-8P60410 259 aa7.52□□□□□ -1.21
TRIM56-201ENST00000306085 PP632Q6XCG6 107 aa7.51□□□□□ -1.21
TRIM56-201ENST00000306085 FRYLO94915 3013 aa7.44□□□□□ -1.22
TRIM56-201ENST00000306085 PRUNE2Q8WUY3 3088 aa7.44□□□□□ -1.22
TRIM56-201ENST00000306085 RPS29P62273 56 aaKnown RBP7.42□□□□□ -1.22
TRIM56-201ENST00000306085 COL12A1Q99715 3063 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms